RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 MAP3K10Q02779 954 aa15.66■□□□□ 0.1
CD44-203ENST00000278386 PRKCZQ05513 592 aa15.66■□□□□ 0.1
CD44-203ENST00000278386 POLA2Q14181 598 aa15.66■□□□□ 0.1
CD44-203ENST00000278386 NAA16Q6N069 864 aaPredicted RBP15.66■□□□□ 0.1
CD44-203ENST00000278386 GPR108Q9NPR9 543 aa15.66■□□□□ 0.1
CD44-203ENST00000278386 AATFQ9NY61 560 aaKnown RBP eCLIP15.66■□□□□ 0.1
CD44-203ENST00000278386 BIN2Q9UBW5 565 aaPredicted RBP15.66■□□□□ 0.1
CD44-203ENST00000278386 SLC45A1Q9Y2W3 748 aa15.66■□□□□ 0.1
CD44-203ENST00000278386 DOCK3Q8IZD9 2030 aa15.66■□□□□ 0.1
CD44-203ENST00000278386 TBC1D12O60347 775 aa15.65■□□□□ 0.1
CD44-203ENST00000278386 MTFR1Q15390 333 aa15.65■□□□□ 0.1
CD44-203ENST00000278386 SSH3Q8TE77 659 aa15.65■□□□□ 0.1
CD44-203ENST00000278386 SH3RF3Q8TEJ3 882 aaPredicted RBP15.65■□□□□ 0.1
CD44-203ENST00000278386 PNMA3Q9UL41 463 aa15.65■□□□□ 0.1
CD44-203ENST00000278386 AGTPBP1Q9UPW5 1226 aa15.65■□□□□ 0.1
CD44-203ENST00000278386 BAG3O95817 575 aa15.64■□□□□ 0.09
CD44-203ENST00000278386 PLCG2P16885 1265 aa15.64■□□□□ 0.09
CD44-203ENST00000278386 UBXN2AP68543 259 aa15.64■□□□□ 0.09
CD44-203ENST00000278386 ATP8B2P98198 1209 aa15.64■□□□□ 0.09
CD44-203ENST00000278386 NAV1Q8NEY1 1877 aa15.64■□□□□ 0.09
CD44-203ENST00000278386 TNPO2O14787 897 aaKnown RBP15.63■□□□□ 0.09
CD44-203ENST00000278386 TREML2Q5T2D2 321 aa15.63■□□□□ 0.09
CD44-203ENST00000278386 MAPKAPK5Q8IW41 473 aa15.63■□□□□ 0.09
CD44-203ENST00000278386 MIER1Q8N108 512 aa15.63■□□□□ 0.09
CD44-203ENST00000278386 PROCA1Q8NCQ7 364 aaPredicted RBP15.63■□□□□ 0.09
CD44-203ENST00000278386 SLAIN1Q8ND83 568 aa15.63■□□□□ 0.09
CD44-203ENST00000278386 TRIM34Q9BYJ4 488 aa15.63■□□□□ 0.09
CD44-203ENST00000278386 HERC5Q9UII4 1024 aaKnown RBP15.63■□□□□ 0.09
CD44-203ENST00000278386 TAOK2Q9UL54 1235 aa15.63■□□□□ 0.09
CD44-203ENST00000278386 GABRQQ9UN88 632 aa15.63■□□□□ 0.09
CD44-203ENST00000278386 CYP2E1P05181 493 aaPredicted RBP15.62■□□□□ 0.09
CD44-203ENST00000278386 RLBP1P12271 317 aa15.62■□□□□ 0.09
CD44-203ENST00000278386 CAP2P40123 477 aa15.62■□□□□ 0.09
CD44-203ENST00000278386 ZAP70P43403 619 aa15.62■□□□□ 0.09
CD44-203ENST00000278386 HMGCS2P54868 508 aa15.62■□□□□ 0.09
CD44-203ENST00000278386 SPP2Q13103 211 aa15.62■□□□□ 0.09
CD44-203ENST00000278386 ANKRD13CQ8N6S4 541 aa15.62■□□□□ 0.09
CD44-203ENST00000278386 ZNF280CQ8ND82 737 aa15.62■□□□□ 0.09
CD44-203ENST00000278386 TGFBRAP1Q8WUH2 860 aa15.62■□□□□ 0.09
CD44-203ENST00000278386 SHISA4Q96DD7 197 aa15.62■□□□□ 0.09
CD44-203ENST00000278386 TBC1D2Q9BYX2 928 aa15.62■□□□□ 0.09
CD44-203ENST00000278386 AS3MTQ9HBK9 375 aa15.62■□□□□ 0.09
CD44-203ENST00000278386 TLR7Q9NYK1 1049 aaKnown RBP15.62■□□□□ 0.09
CD44-203ENST00000278386 FLT1P17948 1338 aa15.62■□□□□ 0.09
CD44-203ENST00000278386 USP17L5A8MUK1 530 aa15.61■□□□□ 0.09
CD44-203ENST00000278386 CCL5P13501 91 aa15.61■□□□□ 0.09
CD44-203ENST00000278386 PABPC4Q13310 644 aaKnown RBP eCLIP15.61■□□□□ 0.09
CD44-203ENST00000278386 DIEXFQ68CQ4 756 aaKnown RBP15.61■□□□□ 0.09
CD44-203ENST00000278386 ADGRA1Q86SQ6 560 aa15.61■□□□□ 0.09
CD44-203ENST00000278386 CRACR2BQ8N4Y2 399 aaPredicted RBP15.61■□□□□ 0.09
CD44-203ENST00000278386 NKX2-3Q8TAU0 364 aa15.61■□□□□ 0.09
CD44-203ENST00000278386 CCDC8Q9H0W5 538 aaPredicted RBP15.61■□□□□ 0.09
CD44-203ENST00000278386 RNF208Q9H0X6 261 aa15.61■□□□□ 0.09
CD44-203ENST00000278386 DHX36Q9H2U1 1008 aaKnown RBP15.61■□□□□ 0.09
CD44-203ENST00000278386 PI4KBQ9UBF8 816 aa15.61■□□□□ 0.09
CD44-203ENST00000278386 DBNLQ9UJU6 430 aaKnown RBP15.61■□□□□ 0.09
CD44-203ENST00000278386 ADCY3O60266 1144 aa15.6■□□□□ 0.09
CD44-203ENST00000278386 FLT3LGP49771 235 aa15.6■□□□□ 0.09
CD44-203ENST00000278386 RRP1BQ14684 758 aaKnown RBP15.6■□□□□ 0.09
CD44-203ENST00000278386 FAM110CQ1W6H9 321 aa15.6■□□□□ 0.09
CD44-203ENST00000278386 PIH1D3Q9NQM4 214 aaKnown RBP15.6■□□□□ 0.09
CD44-203ENST00000278386 NOP58Q9Y2X3 529 aaKnown RBP15.6■□□□□ 0.09
CD44-203ENST00000278386 ZBED9Q6R2W3 1325 aa15.6■□□□□ 0.09
CD44-203ENST00000278386 MYH8P13535 1937 aa15.6■□□□□ 0.09
CD44-203ENST00000278386 ZBTB7BO15156 539 aaPredicted RBP15.59■□□□□ 0.09
CD44-203ENST00000278386 IDH1O75874 414 aaKnown RBP15.59■□□□□ 0.09
CD44-203ENST00000278386 HLA-DOAP06340 250 aa15.59■□□□□ 0.09
CD44-203ENST00000278386 ELNP15502 786 aa15.59■□□□□ 0.09
CD44-203ENST00000278386 CYP7A1P22680 504 aa15.59■□□□□ 0.09
CD44-203ENST00000278386 MTMR2Q13614 643 aa15.59■□□□□ 0.09
CD44-203ENST00000278386 HABP4Q5JVS0 413 aaKnown RBP15.59■□□□□ 0.09
CD44-203ENST00000278386 CEP85Q6P2H3 762 aa15.59■□□□□ 0.09
CD44-203ENST00000278386 COA7Q96BR5 231 aa15.59■□□□□ 0.09
CD44-203ENST00000278386 ZNF512BQ96KM6 892 aaPredicted RBP15.59■□□□□ 0.09
CD44-203ENST00000278386 SAP30BPQ9UHR5 308 aaKnown RBP15.59■□□□□ 0.09
CD44-203ENST00000278386 DDX60LQ5H9U9 1706 aaKnown RBP15.59■□□□□ 0.09
CD44-203ENST00000278386 GDF11O95390 407 aa15.58■□□□□ 0.08
CD44-203ENST00000278386 GJB1P08034 283 aa15.58■□□□□ 0.08
CD44-203ENST00000278386 ASNSP08243 561 aa15.58■□□□□ 0.08
CD44-203ENST00000278386 GJA8P48165 433 aa15.58■□□□□ 0.08
CD44-203ENST00000278386 PPP4CP60510 307 aa15.58■□□□□ 0.08
CD44-203ENST00000278386 DYNLL1P63167 89 aaKnown RBP15.58■□□□□ 0.08
CD44-203ENST00000278386 EAF2Q96CJ1 260 aaPredicted RBP15.58■□□□□ 0.08
CD44-203ENST00000278386 UNC93B1Q9H1C4 597 aa15.58■□□□□ 0.08
CD44-203ENST00000278386 DNAJC18Q9H819 358 aa15.58■□□□□ 0.08
CD44-203ENST00000278386 TMOD4Q9NZQ9 345 aa15.58■□□□□ 0.08
CD44-203ENST00000278386 PCDH10Q9P2E7 1040 aa15.58■□□□□ 0.08
CD44-203ENST00000278386 PALD1Q9ULE6 856 aa15.58■□□□□ 0.08
CD44-203ENST00000278386 EXOC6BQ9Y2D4 811 aa15.58■□□□□ 0.08
CD44-203ENST00000278386 PLXNB2O15031 1838 aa15.58■□□□□ 0.08
CD44-203ENST00000278386 INHAP05111 366 aa15.57■□□□□ 0.08
CD44-203ENST00000278386 GCLCP48506 637 aaPredicted RBP15.57■□□□□ 0.08
CD44-203ENST00000278386 IRX3P78415 501 aaPredicted RBP15.57■□□□□ 0.08
CD44-203ENST00000278386 AACSQ86V21 672 aa15.57■□□□□ 0.08
CD44-203ENST00000278386 ERC1Q8IUD2 1116 aa15.57■□□□□ 0.08
CD44-203ENST00000278386 MIGA1Q8NAN2 632 aa15.57■□□□□ 0.08
CD44-203ENST00000278386 PANK1Q8TE04 598 aa15.57■□□□□ 0.08
CD44-203ENST00000278386 U2AF1L4Q8WU68 220 aaKnown RBP15.57■□□□□ 0.08
CD44-203ENST00000278386 ASCC2Q9H1I8 757 aaPredicted RBP15.57■□□□□ 0.08
CD44-203ENST00000278386 NDUFB9Q9Y6M9 179 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms