RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 RTN1Q16799 776 aa23.33■■□□□ 1.33
RAB5A-201ENST00000273047 SHC4Q6S5L8 630 aa23.33■■□□□ 1.33
RAB5A-201ENST00000273047 GNL3LQ9NVN8 582 aaKnown RBP23.33■■□□□ 1.33
RAB5A-201ENST00000273047 KIAA1468Q9P260 1216 aa23.33■■□□□ 1.33
RAB5A-201ENST00000273047 ZHX1Q9UKY1 873 aaPredicted RBP23.33■■□□□ 1.33
RAB5A-201ENST00000273047 GOLGA6L6A8MZA4 724 aa23.32■■□□□ 1.32
RAB5A-201ENST00000273047 TOM1O60784 492 aa23.32■■□□□ 1.32
RAB5A-201ENST00000273047 FMNL1O95466 1100 aaPredicted RBP23.32■■□□□ 1.32
RAB5A-201ENST00000273047 ATP2B1P20020 1258 aa23.32■■□□□ 1.32
RAB5A-201ENST00000273047 RPS8P62241 208 aaKnown RBP23.32■■□□□ 1.32
RAB5A-201ENST00000273047 NR5A1Q13285 461 aa23.32■■□□□ 1.32
RAB5A-201ENST00000273047 UTP14CQ5TAP6 766 aaKnown RBP23.32■■□□□ 1.32
RAB5A-201ENST00000273047 MAP3K14Q99558 947 aa23.32■■□□□ 1.32
RAB5A-201ENST00000273047 SPTLC3Q9NUV7 552 aa23.32■■□□□ 1.32
RAB5A-201ENST00000273047 ERICH2A1L162 156 aa23.32■■□□□ 1.32
RAB5A-201ENST00000273047 PRDX5P30044 214 aa23.32■■□□□ 1.32
RAB5A-201ENST00000273047 PTPAQ15257 358 aa23.32■■□□□ 1.32
RAB5A-201ENST00000273047 UBAC1Q9BSL1 405 aa23.32■■□□□ 1.32
RAB5A-201ENST00000273047 ANO10Q9NW15 660 aa23.32■■□□□ 1.32
RAB5A-201ENST00000273047 AATFQ9NY61 560 aaKnown RBP eCLIP23.32■■□□□ 1.32
RAB5A-201ENST00000273047 TNKSO95271 1327 aa23.32■■□□□ 1.32
RAB5A-201ENST00000273047 CACNA1SQ13698 1873 aa23.32■■□□□ 1.32
RAB5A-201ENST00000273047 ZPR1O75312 459 aa23.31■■□□□ 1.32
RAB5A-201ENST00000273047 ZNF654Q8IZM8 581 aa23.31■■□□□ 1.32
RAB5A-201ENST00000273047 GRIN1Q05586 938 aa23.31■■□□□ 1.32
RAB5A-201ENST00000273047 SART3Q15020 963 aaKnown RBP23.31■■□□□ 1.32
RAB5A-201ENST00000273047 NLRP3Q96P20 1036 aa23.31■■□□□ 1.32
RAB5A-201ENST00000273047 CCNL1Q9UK58 526 aaPredicted RBP23.31■■□□□ 1.32
RAB5A-201ENST00000273047 A0A1B0GUL6 1792 aa23.31■■□□□ 1.32
RAB5A-201ENST00000273047 UBAP1LF5GYI3 381 aa23.3■■□□□ 1.32
RAB5A-201ENST00000273047 NPHP1O15259 732 aa23.3■■□□□ 1.32
RAB5A-201ENST00000273047 IFNAR1P17181 557 aa23.3■■□□□ 1.32
RAB5A-201ENST00000273047 U2AF2P26368 475 aaKnown RBP eCLIP23.3■■□□□ 1.321e-6■■■□□ 16
RAB5A-201ENST00000273047 NBPF11Q86T75 865 aa23.3■■□□□ 1.32
RAB5A-201ENST00000273047 OXER1Q8TDS5 423 aa23.3■■□□□ 1.32
RAB5A-201ENST00000273047 NARFQ9UHQ1 456 aa23.3■■□□□ 1.32
RAB5A-201ENST00000273047 NMT2O60551 498 aa23.3■■□□□ 1.32
RAB5A-201ENST00000273047 MECOMQ03112 1051 aa23.3■■□□□ 1.32
RAB5A-201ENST00000273047 VPS72Q15906 364 aa23.3■■□□□ 1.32
RAB5A-201ENST00000273047 DIS3L2Q8IYB7 885 aaKnown RBP23.3■■□□□ 1.32
RAB5A-201ENST00000273047 FANCBQ8NB91 859 aa23.3■■□□□ 1.32
RAB5A-201ENST00000273047 ARHGEF1Q92888 912 aaKnown RBP23.3■■□□□ 1.32
RAB5A-201ENST00000273047 SLC3A2P08195 630 aaKnown RBP23.29■■□□□ 1.32
RAB5A-201ENST00000273047 CMA1P23946 247 aa23.29■■□□□ 1.32
RAB5A-201ENST00000273047 CACTINQ8WUQ7 758 aaKnown RBP23.29■■□□□ 1.32
RAB5A-201ENST00000273047 SHISA4Q96DD7 197 aa23.29■■□□□ 1.32
RAB5A-201ENST00000273047 MYH13Q9UKX3 1938 aa23.29■■□□□ 1.32
RAB5A-201ENST00000273047 TIAM2Q8IVF5 1701 aa23.29■■□□□ 1.32
RAB5A-201ENST00000273047 CNTNAP4Q9C0A0 1308 aa23.29■■□□□ 1.32
RAB5A-201ENST00000273047 USP17L12C9JPN9 530 aa23.29■■□□□ 1.32
RAB5A-201ENST00000273047 USP17L21D6R901 530 aa23.29■■□□□ 1.32
RAB5A-201ENST00000273047 TOB1P50616 345 aaPredicted RBP23.29■■□□□ 1.32
RAB5A-201ENST00000273047 CEP57L1Q8IYX8 460 aa23.29■■□□□ 1.32
RAB5A-201ENST00000273047 CRACR2BQ8N4Y2 399 aaPredicted RBP23.29■■□□□ 1.32
RAB5A-201ENST00000273047 ENAHQ8N8S7 591 aaPredicted RBP23.29■■□□□ 1.32
RAB5A-201ENST00000273047 GPR101Q96P66 508 aaPredicted RBP23.28■■□□□ 1.32
RAB5A-201ENST00000273047 RPS6KA4O75676 772 aa23.28■■□□□ 1.32
RAB5A-201ENST00000273047 SYKP43405 635 aa23.28■■□□□ 1.32
RAB5A-201ENST00000273047 CBX1P83916 185 aa23.28■■□□□ 1.32
RAB5A-201ENST00000273047 FILIP1Q7Z7B0 1213 aa23.28■■□□□ 1.32
RAB5A-201ENST00000273047 NSUN4Q96CB9 384 aaKnown RBP23.28■■□□□ 1.32
RAB5A-201ENST00000273047 MMP1P03956 469 aa23.27■■□□□ 1.32
RAB5A-201ENST00000273047 CYP2D6P10635 497 aa23.27■■□□□ 1.32
RAB5A-201ENST00000273047 PNOCQ13519 176 aa23.27■■□□□ 1.32
RAB5A-201ENST00000273047 SEC23AQ15436 765 aa23.27■■□□□ 1.32
RAB5A-201ENST00000273047 CTR9Q6PD62 1173 aa23.27■■□□□ 1.32
RAB5A-201ENST00000273047 FBXO33Q7Z6M2 555 aa23.27■■□□□ 1.32
RAB5A-201ENST00000273047 NOSTRINQ8IVI9 506 aa23.27■■□□□ 1.32
RAB5A-201ENST00000273047 RNF41Q9H4P4 317 aaPredicted RBP23.27■■□□□ 1.32
RAB5A-201ENST00000273047 FAM205CA6NFA0 338 aa23.27■■□□□ 1.32
RAB5A-201ENST00000273047 FAM47AQ5JRC9 791 aa23.27■■□□□ 1.32
RAB5A-201ENST00000273047 SLC10A5Q5PT55 438 aa23.27■■□□□ 1.32
RAB5A-201ENST00000273047 ESR2Q92731 530 aa23.27■■□□□ 1.32
RAB5A-201ENST00000273047 USP21Q9UK80 565 aa23.27■■□□□ 1.32
RAB5A-201ENST00000273047 ZRSR1Q15695 479 aaKnown RBP23.26■■□□□ 1.31
RAB5A-201ENST00000273047 PPP4R3BQ5MIZ7 849 aa23.26■■□□□ 1.31
RAB5A-201ENST00000273047 TRIM22Q8IYM9 498 aa23.26■■□□□ 1.31
RAB5A-201ENST00000273047 RTCBQ9Y3I0 505 aaKnown RBP23.26■■□□□ 1.31
RAB5A-201ENST00000273047 FOXN1O15353 648 aa23.26■■□□□ 1.31
RAB5A-201ENST00000273047 PLEKHA8P1O95397 391 aa23.26■■□□□ 1.31
RAB5A-201ENST00000273047 CAVIN2O95810 425 aa23.26■■□□□ 1.31
RAB5A-201ENST00000273047 HIBADHP31937 336 aaKnown RBP23.26■■□□□ 1.31
RAB5A-201ENST00000273047 VPS54Q9P1Q0 977 aa23.26■■□□□ 1.31
RAB5A-201ENST00000273047 LONRF3Q496Y0 759 aa23.25■■□□□ 1.31
RAB5A-201ENST00000273047 PCDHB6Q9Y5E3 794 aa23.25■■□□□ 1.31
RAB5A-201ENST00000273047 BTAF1O14981 1849 aa23.25■■□□□ 1.31
RAB5A-201ENST00000273047 TM4SF1P30408 202 aa23.25■■□□□ 1.31
RAB5A-201ENST00000273047 ZSCAN10Q96SZ4 725 aaPredicted RBP23.25■■□□□ 1.31
RAB5A-201ENST00000273047 TPTE2Q6XPS3 522 aa23.24■■□□□ 1.31
RAB5A-201ENST00000273047 STK36Q9NRP7 1315 aa23.24■■□□□ 1.31
RAB5A-201ENST00000273047 PPP6R2O75170 966 aa23.23■■□□□ 1.31
RAB5A-201ENST00000273047 EARS2Q5JPH6 523 aaKnown RBP23.23■■□□□ 1.31
RAB5A-201ENST00000273047 IFIT1BQ5T764 474 aaKnown RBP23.23■■□□□ 1.31
RAB5A-201ENST00000273047 NYXQ9GZU5 481 aa23.23■■□□□ 1.31
RAB5A-201ENST00000273047 CABP5Q9NP86 173 aa23.23■■□□□ 1.31
RAB5A-201ENST00000273047 HPSEQ9Y251 543 aa23.23■■□□□ 1.31
RAB5A-201ENST00000273047 SCN7AQ01118 1682 aa23.23■■□□□ 1.31
RAB5A-201ENST00000273047 TPM3P06753 285 aa23.23■■□□□ 1.31
RAB5A-201ENST00000273047 NFIXQ14938 502 aa23.23■■□□□ 1.31
RAB5A-201ENST00000273047 NOM1Q5C9Z4 860 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms