RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 CALM1P0DP23 149 aa10.79□□□□□ -0.68
SSR3-201ENST00000265044 CALM2P0DP24 149 aa10.79□□□□□ -0.68
SSR3-201ENST00000265044 CALM3P0DP25 149 aa10.79□□□□□ -0.68
SSR3-201ENST00000265044 CTR9Q6PD62 1173 aa10.79□□□□□ -0.68
SSR3-201ENST00000265044 FANCBQ8NB91 859 aa10.79□□□□□ -0.68
SSR3-201ENST00000265044 TSPY26PQ9H489 355 aa10.79□□□□□ -0.68
SSR3-201ENST00000265044 ZSCAN23Q3MJ62 389 aa10.79□□□□□ -0.68
SSR3-201ENST00000265044 CKAP2LQ8IYA6 745 aa10.79□□□□□ -0.68
SSR3-201ENST00000265044 STAG1Q8WVM7 1258 aa10.79□□□□□ -0.68
SSR3-201ENST00000265044 SEC63Q9UGP8 760 aaKnown RBP10.79□□□□□ -0.68
SSR3-201ENST00000265044 BECN2A8MW95 431 aa10.78□□□□□ -0.68
SSR3-201ENST00000265044 PODNQ7Z5L7 613 aa10.78□□□□□ -0.68
SSR3-201ENST00000265044 UBR2Q8IWV8 1755 aa10.78□□□□□ -0.68
SSR3-201ENST00000265044 MYO1BO43795 1136 aa10.78□□□□□ -0.68
SSR3-201ENST00000265044 MARCKSP29966 332 aaPredicted RBP10.78□□□□□ -0.68
SSR3-201ENST00000265044 CACNB3P54284 484 aa10.78□□□□□ -0.68
SSR3-201ENST00000265044 NIM1KQ8IY84 436 aa10.78□□□□□ -0.68
SSR3-201ENST00000265044 SLC44A5Q8NCS7 719 aa10.78□□□□□ -0.68
SSR3-201ENST00000265044 GJB4Q9NTQ9 266 aa10.78□□□□□ -0.68
SSR3-201ENST00000265044 ZMYM6O95789 1325 aa10.78□□□□□ -0.68
SSR3-201ENST00000265044 LETM1O95202 739 aaPredicted RBP10.78□□□□□ -0.68
SSR3-201ENST00000265044 HOXA10P31260 410 aaPredicted RBP10.78□□□□□ -0.68
SSR3-201ENST00000265044 ANTXR2P58335 489 aa10.78□□□□□ -0.68
SSR3-201ENST00000265044 R3HDM1Q15032 1099 aaKnown RBP10.78□□□□□ -0.68
SSR3-201ENST00000265044 CCDC178Q5BJE1 867 aa10.78□□□□□ -0.68
SSR3-201ENST00000265044 CCDC183Q5T5S1 534 aa10.78□□□□□ -0.68
SSR3-201ENST00000265044 AKT1S1Q96B36 256 aa10.78□□□□□ -0.68
SSR3-201ENST00000265044 AIFM3Q96NN9 605 aa10.78□□□□□ -0.68
SSR3-201ENST00000265044 NOL7Q9UMY1 257 aaKnown RBP10.78□□□□□ -0.68
SSR3-201ENST00000265044 KCNJ14Q9UNX9 436 aa10.78□□□□□ -0.68
SSR3-201ENST00000265044 PSDA5PKW4 1024 aaPredicted RBP10.77□□□□□ -0.69
SSR3-201ENST00000265044 CRY2Q49AN0 593 aa10.77□□□□□ -0.69
SSR3-201ENST00000265044 CCDC93Q567U6 631 aa10.77□□□□□ -0.69
SSR3-201ENST00000265044 KRT40Q6A162 431 aa10.77□□□□□ -0.69
SSR3-201ENST00000265044 FSIP1Q8NA03 581 aa10.77□□□□□ -0.69
SSR3-201ENST00000265044 GJA3Q9Y6H8 435 aa10.77□□□□□ -0.69
SSR3-201ENST00000265044 MROH7-TTC4A0A0A0MT08 1334 aa10.77□□□□□ -0.69
SSR3-201ENST00000265044 SHANK3Q9BYB0 1731 aa10.77□□□□□ -0.69
SSR3-201ENST00000265044 GOLGA6L19H0YKK7 550 aa10.77□□□□□ -0.69
SSR3-201ENST00000265044 ECE2O60344 883 aa10.77□□□□□ -0.69
SSR3-201ENST00000265044 NMT2O60551 498 aa10.77□□□□□ -0.69
SSR3-201ENST00000265044 LIFRP42702 1097 aa10.77□□□□□ -0.69
SSR3-201ENST00000265044 GIMAP6Q6P9H5 292 aa10.77□□□□□ -0.69
SSR3-201ENST00000265044 RIOK1Q9BRS2 568 aaKnown RBP10.77□□□□□ -0.69
SSR3-201ENST00000265044 ALDH8A1Q9H2A2 487 aaPredicted RBP10.77□□□□□ -0.69
SSR3-201ENST00000265044 SENP2Q9HC62 589 aa10.77□□□□□ -0.69
SSR3-201ENST00000265044 DACT1Q9NYF0 836 aa10.77□□□□□ -0.69
SSR3-201ENST00000265044 NRAPQ86VF7 1730 aa10.77□□□□□ -0.69
SSR3-201ENST00000265044 USP17L3A6NCW0 530 aa10.76□□□□□ -0.69
SSR3-201ENST00000265044 USP17L4A6NCW7 530 aa10.76□□□□□ -0.69
SSR3-201ENST00000265044 DEXIO95424 95 aa10.76□□□□□ -0.69
SSR3-201ENST00000265044 DDIT3P35638 169 aa10.76□□□□□ -0.69
SSR3-201ENST00000265044 USP17L1Q7RTZ2 530 aa10.76□□□□□ -0.69
SSR3-201ENST00000265044 CABP5Q9NP86 173 aa10.76□□□□□ -0.69
SSR3-201ENST00000265044 CCDC192P0DO97 292 aa10.76□□□□□ -0.69
SSR3-201ENST00000265044 MAP3K11Q16584 847 aa10.76□□□□□ -0.69
SSR3-201ENST00000265044 CC2D2BQ6DHV5 1058 aa10.76□□□□□ -0.69
SSR3-201ENST00000265044 HEATR3Q7Z4Q2 680 aa10.76□□□□□ -0.69
SSR3-201ENST00000265044 CCAR1Q8IX12 1150 aaKnown RBP10.76□□□□□ -0.69
SSR3-201ENST00000265044 PNMA1Q8ND90 353 aa10.76□□□□□ -0.69
SSR3-201ENST00000265044 ZNF277Q9NRM2 450 aaPredicted RBP10.76□□□□□ -0.69
SSR3-201ENST00000265044 GNAQP50148 359 aa10.76□□□□□ -0.69
SSR3-201ENST00000265044 DLGAP5Q15398 846 aa10.76□□□□□ -0.69
SSR3-201ENST00000265044 FBXO18Q8NFZ0 1043 aa10.76□□□□□ -0.69
SSR3-201ENST00000265044 PANK2Q9BZ23 570 aa10.76□□□□□ -0.69
SSR3-201ENST00000265044 LY9Q9HBG7 655 aa10.76□□□□□ -0.69
SSR3-201ENST00000265044 PCP11498 1178 aaKnown RBP10.75□□□□□ -0.69
SSR3-201ENST00000265044 DIS3L2Q8IYB7 885 aaKnown RBP10.75□□□□□ -0.69
SSR3-201ENST00000265044 LEO1Q8WVC0 666 aaPredicted RBP10.75□□□□□ -0.69
SSR3-201ENST00000265044 RBM28Q9NW13 759 aaKnown RBP10.75□□□□□ -0.69
SSR3-201ENST00000265044 VPS54Q9P1Q0 977 aa10.75□□□□□ -0.69
SSR3-201ENST00000265044 PIM2Q9P1W9 311 aa10.75□□□□□ -0.69
SSR3-201ENST00000265044 CTDP1Q9Y5B0 961 aaPredicted RBP10.75□□□□□ -0.69
SSR3-201ENST00000265044 CCDC194A0A1B0GVG4 234 aa10.75□□□□□ -0.69
SSR3-201ENST00000265044 CLRN2A0PK11 232 aa10.75□□□□□ -0.69
SSR3-201ENST00000265044 GOLGA8HP0CJ92 632 aa10.75□□□□□ -0.69
SSR3-201ENST00000265044 CDC27P30260 824 aa10.75□□□□□ -0.69
SSR3-201ENST00000265044 GRIK5Q16478 980 aa10.75□□□□□ -0.69
SSR3-201ENST00000265044 BRAPQ7Z569 592 aa10.75□□□□□ -0.69
SSR3-201ENST00000265044 GPT2Q8TD30 523 aa10.75□□□□□ -0.69
SSR3-201ENST00000265044 IGDCC4Q8TDY8 1250 aa10.75□□□□□ -0.69
SSR3-201ENST00000265044 PDGFDQ9GZP0 370 aaPredicted RBP10.75□□□□□ -0.69
SSR3-201ENST00000265044 BTAF1O14981 1849 aa10.75□□□□□ -0.69
SSR3-201ENST00000265044 TCP10L2B9ZVM9 353 aa10.74□□□□□ -0.69
SSR3-201ENST00000265044 SMIM22K7EJ46 135 aa10.74□□□□□ -0.69
SSR3-201ENST00000265044 SPTLC2O15270 562 aa10.74□□□□□ -0.69
SSR3-201ENST00000265044 RTKN2Q8IZC4 609 aa10.74□□□□□ -0.69
SSR3-201ENST00000265044 ENAHQ8N8S7 591 aaPredicted RBP10.74□□□□□ -0.69
SSR3-201ENST00000265044 USP28Q96RU2 1077 aa10.74□□□□□ -0.69
SSR3-201ENST00000265044 TMEM63CQ9P1W3 806 aa10.74□□□□□ -0.69
SSR3-201ENST00000265044 CLIP2Q9UDT6 1046 aa10.74□□□□□ -0.69
SSR3-201ENST00000265044 DPEP1P16444 411 aa10.74□□□□□ -0.69
SSR3-201ENST00000265044 CRKP46108 304 aa10.74□□□□□ -0.69
SSR3-201ENST00000265044 DALRD3Q5D0E6 543 aaKnown RBP10.74□□□□□ -0.69
SSR3-201ENST00000265044 CREBRFQ8IUR6 639 aa10.74□□□□□ -0.69
SSR3-201ENST00000265044 FTOQ9C0B1 505 aaKnown RBP eCLIP10.74□□□□□ -0.69
SSR3-201ENST00000265044 SERPINB13Q9UIV8 391 aa10.74□□□□□ -0.69
SSR3-201ENST00000265044 DAGLAQ9Y4D2 1042 aa10.74□□□□□ -0.69
SSR3-201ENST00000265044 PARP1P09874 1014 aaKnown RBP10.74□□□□□ -0.69
SSR3-201ENST00000265044 CDK8P49336 464 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms