RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 A0A1W2PQ27 194 aa15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 A0A1W2PQ64 194 aa15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 A0A1W2PQD8 194 aa15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 KINO60870 393 aaKnown RBP15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 IGSF3O75054 1194 aa15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 ST5P78524 1137 aa15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 PRR5LQ6MZQ0 368 aa15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 TXNRD3Q86VQ6 643 aa15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 MRPS27Q92552 414 aaKnown RBP15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 GOLPH3LQ9H4A5 285 aa15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 XDHP47989 1333 aa15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 SPTLC2O15270 562 aa15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 ADCY5O95622 1261 aa15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 PRDX5P30044 214 aa15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 ANO1Q5XXA6 986 aa15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 CTR9Q6PD62 1173 aa15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 DZIP1Q86YF9 867 aaKnown RBP15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 ZNF654Q8IZM8 581 aa15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 ATP8A2Q9NTI2 1148 aa15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 AATFQ9NY61 560 aaKnown RBP eCLIP15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 DLEC1Q9Y238 1755 aa15.01□□□□□ -0.01
SPTLC1-201ENST00000262554 TNKSO95271 1327 aa15□□□□□ -0.01
SPTLC1-201ENST00000262554 BRWD3Q6RI45 1802 aa15□□□□□ -0.01
SPTLC1-201ENST00000262554 CAVIN2O95810 425 aa15□□□□□ -0.01
SPTLC1-201ENST00000262554 GYS1P13807 737 aa15□□□□□ -0.01
SPTLC1-201ENST00000262554 SNW1Q13573 536 aaKnown RBP15□□□□□ -0.01
SPTLC1-201ENST00000262554 PPP2R5BQ15173 497 aa15□□□□□ -0.01
SPTLC1-201ENST00000262554 SEC23AQ15436 765 aa15□□□□□ -0.01
SPTLC1-201ENST00000262554 ANO6Q4KMQ2 910 aa15□□□□□ -0.01
SPTLC1-201ENST00000262554 ZNF804AQ7Z570 1209 aa15□□□□□ -0.01
SPTLC1-201ENST00000262554 FANCBQ8NB91 859 aa15□□□□□ -0.01
SPTLC1-201ENST00000262554 ENGASEQ8NFI3 743 aa15□□□□□ -0.01
SPTLC1-201ENST00000262554 WDR66Q8TBY9 1149 aa15□□□□□ -0.01
SPTLC1-201ENST00000262554 SSUH2Q9Y2M2 353 aa15□□□□□ -0.01
SPTLC1-201ENST00000262554 MYH6P13533 1939 aa15□□□□□ -0.01
SPTLC1-201ENST00000262554 SLC3A2P08195 630 aaKnown RBP14.99□□□□□ -0.01
SPTLC1-201ENST00000262554 FGRP09769 529 aa14.99□□□□□ -0.01
SPTLC1-201ENST00000262554 HMGB2P26583 209 aaKnown RBP14.99□□□□□ -0.01
SPTLC1-201ENST00000262554 IQCA1Q86XH1 822 aa14.99□□□□□ -0.01
SPTLC1-201ENST00000262554 ZSCAN10Q96SZ4 725 aaPredicted RBP14.99□□□□□ -0.01
SPTLC1-201ENST00000262554 CYP2D7A0A087X1C5 515 aa14.99□□□□□ -0.01
SPTLC1-201ENST00000262554 USP17L12C9JPN9 530 aa14.99□□□□□ -0.01
SPTLC1-201ENST00000262554 USP17L21D6R901 530 aa14.99□□□□□ -0.01
SPTLC1-201ENST00000262554 SERPINB2P05120 415 aa14.99□□□□□ -0.01
SPTLC1-201ENST00000262554 U2AF2P26368 475 aaKnown RBP eCLIP14.99□□□□□ -0.013e-6■■■□□ 15.4
SPTLC1-201ENST00000262554 PLCB2Q00722 1185 aa14.99□□□□□ -0.01
SPTLC1-201ENST00000262554 KRT27Q7Z3Y8 459 aa14.99□□□□□ -0.01
SPTLC1-201ENST00000262554 NUP133Q8WUM0 1156 aa14.99□□□□□ -0.01
SPTLC1-201ENST00000262554 RBM17Q96I25 401 aaKnown RBP14.99□□□□□ -0.01
SPTLC1-201ENST00000262554 DCP1AQ9NPI6 582 aaPredicted RBP14.99□□□□□ -0.01
SPTLC1-201ENST00000262554 TAOK2Q9UL54 1235 aa14.99□□□□□ -0.01
SPTLC1-201ENST00000262554 ZKSCAN5Q9Y2L8 839 aa14.99□□□□□ -0.01
SPTLC1-201ENST00000262554 DEXIO95424 95 aa14.98□□□□□ -0.01
SPTLC1-201ENST00000262554 LDHBP07195 334 aaKnown RBP14.98□□□□□ -0.01
SPTLC1-201ENST00000262554 SAFBQ15424 915 aaKnown RBP eCLIP14.98□□□□□ -0.01
SPTLC1-201ENST00000262554 CRY2Q49AN0 593 aa14.98□□□□□ -0.01
SPTLC1-201ENST00000262554 C15orf52Q6ZUT6 534 aaKnown RBP14.98□□□□□ -0.01
SPTLC1-201ENST00000262554 ENAHQ8N8S7 591 aaPredicted RBP14.98□□□□□ -0.01
SPTLC1-201ENST00000262554 TDRD7Q8NHU6 1098 aaKnown RBP14.98□□□□□ -0.01
SPTLC1-201ENST00000262554 ARPP21Q9UBL0 812 aaPredicted RBP14.98□□□□□ -0.01
SPTLC1-201ENST00000262554 ORC4O43929 436 aa14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 TRIM37O94972 964 aa14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 GSTO1P78417 241 aa14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 SLC39A14Q15043 492 aa14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 SBK1Q52WX2 424 aa14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 IFIT1BQ5T764 474 aaKnown RBP14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 CATIPQ7Z7H3 387 aa14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 FMR1NBQ8N0W7 255 aaPredicted RBP14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 CRACR2BQ8N4Y2 399 aaPredicted RBP14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 JMYQ8N9B5 988 aa14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 CBX8Q9HC52 389 aa14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 JAG2Q9Y219 1238 aa14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 A0A1B0GVL5 298 aa14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 SMIM22K7EJ46 135 aa14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 CALM1P0DP23 149 aa14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 CALM2P0DP24 149 aa14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 CALM3P0DP25 149 aa14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 NBPF11Q86T75 865 aa14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 LUZP1Q86V48 1076 aa14.97□□□□□ -0.01
SPTLC1-201ENST00000262554 PRDM1O75626 825 aa14.96□□□□□ -0.01
SPTLC1-201ENST00000262554 MMP1P03956 469 aa14.96□□□□□ -0.01
SPTLC1-201ENST00000262554 ATP2B4P23634 1241 aa14.96□□□□□ -0.01
SPTLC1-201ENST00000262554 ZNF165P49910 485 aa14.96□□□□□ -0.01
SPTLC1-201ENST00000262554 GPSM2P81274 684 aa14.96□□□□□ -0.01
SPTLC1-201ENST00000262554 STX1AQ16623 288 aa14.96□□□□□ -0.01
SPTLC1-201ENST00000262554 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.96□□□□□ -0.01
SPTLC1-201ENST00000262554 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.96□□□□□ -0.015e-6■□□□□ 9.7
SPTLC1-201ENST00000262554 UBE2Q2LH0YL09 131 aa14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 PPP6R2O75170 966 aa14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 CMA1P23946 247 aa14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 GUCY1A2P33402 732 aa14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 NDUFA8P51970 172 aa14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 AKAP17AQ02040 695 aaKnown RBP14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 PDE4BQ07343 736 aa14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 CCDC82Q8N4S0 544 aa14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 SDF4Q9BRK5 362 aa14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 NOL10Q9BSC4 688 aaKnown RBP14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 RNF26Q9BY78 433 aaPredicted RBP14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 DNAJC25Q9H1X3 360 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms