RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 C2orf54Q08AI8 447 aa18■□□□□ 0.47
PRPF40B-201ENST00000261897 NR5A1Q13285 461 aa18■□□□□ 0.47
PRPF40B-201ENST00000261897 RSRC2Q7L4I2 434 aaKnown RBP18■□□□□ 0.47
PRPF40B-201ENST00000261897 ANKRD13CQ8N6S4 541 aa18■□□□□ 0.47
PRPF40B-201ENST00000261897 ZNHIT6Q9NWK9 470 aaKnown RBP18■□□□□ 0.47
PRPF40B-201ENST00000261897 M0R2C6 588 aa17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 GCKRQ14397 625 aa17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 CCDC96Q2M329 555 aa17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 FOXP4Q8IVH2 680 aaPredicted RBP17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 KIRREL3Q8IZU9 778 aa17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 SYNRGQ9UMZ2 1314 aa17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 ASXL2Q76L83 1435 aa17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 CXorf56Q9H5V9 222 aa17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 KAT14Q9H8E8 782 aa17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 A0A087WUV0 522 aaPredicted RBP17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 ERICH2A1L162 156 aa17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 RPSAP08865 295 aaKnown RBP17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 TRIM21P19474 475 aaKnown RBP17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 PPP2R5AQ15172 486 aa17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 SLC4A8Q2Y0W8 1093 aa17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 LRRC24Q50LG9 513 aa17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 OSBP2Q969R2 916 aa17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 CAPS2Q9BXY5 557 aa17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 L1RE1Q9UN81 338 aa17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 MAST3O60307 1309 aa17.99■□□□□ 0.47
PRPF40B-201ENST00000261897 NF2P35240 595 aa17.98■□□□□ 0.47
PRPF40B-201ENST00000261897 HLTFQ14527 1009 aaKnown RBP eCLIP17.98■□□□□ 0.47
PRPF40B-201ENST00000261897 ESCO1Q5FWF5 840 aa17.98■□□□□ 0.47
PRPF40B-201ENST00000261897 ZNF274Q96GC6 653 aaPredicted RBP17.98■□□□□ 0.47
PRPF40B-201ENST00000261897 INTS13Q9NVM9 706 aa17.98■□□□□ 0.47
PRPF40B-201ENST00000261897 PTPRMP28827 1452 aa17.98■□□□□ 0.47
PRPF40B-201ENST00000261897 SETBP1Q9Y6X0 1596 aa17.98■□□□□ 0.47
PRPF40B-201ENST00000261897 NRXN1Q9ULB1 1477 aa17.98■□□□□ 0.47
PRPF40B-201ENST00000261897 MYO1FO00160 1098 aa17.98■□□□□ 0.47
PRPF40B-201ENST00000261897 ZNF185O15231 689 aa17.98■□□□□ 0.47
PRPF40B-201ENST00000261897 CORO7P57737 925 aa17.98■□□□□ 0.47
PRPF40B-201ENST00000261897 CYP27A1Q02318 531 aa17.98■□□□□ 0.47
PRPF40B-201ENST00000261897 AMOTL2Q9Y2J4 779 aa17.98■□□□□ 0.47
PRPF40B-201ENST00000261897 KIAA1210Q9ULL0 1709 aa17.98■□□□□ 0.47
PRPF40B-201ENST00000261897 ZNF609O15014 1411 aa17.98■□□□□ 0.47
PRPF40B-201ENST00000261897 BACH1O14867 736 aa17.98■□□□□ 0.47
PRPF40B-201ENST00000261897 SH2D3CQ8N5H7 860 aa17.98■□□□□ 0.47
PRPF40B-201ENST00000261897 RAPGEF4Q8WZA2 1011 aa17.98■□□□□ 0.47
PRPF40B-201ENST00000261897 MINDY4BA8MYZ0 360 aa17.97■□□□□ 0.47
PRPF40B-201ENST00000261897 PPARAQ07869 468 aa17.97■□□□□ 0.47
PRPF40B-201ENST00000261897 GOLGA6L7A0A1B0GV03 622 aa17.97■□□□□ 0.47
PRPF40B-201ENST00000261897 IGKV5-2P06315 115 aa17.97■□□□□ 0.47
PRPF40B-201ENST00000261897 FXR1P51114 621 aaKnown RBP eCLIP17.97■□□□□ 0.47
PRPF40B-201ENST00000261897 GUCY2FP51841 1108 aa17.97■□□□□ 0.47
PRPF40B-201ENST00000261897 ZNF174Q15697 407 aa17.97■□□□□ 0.47
PRPF40B-201ENST00000261897 CCDC57Q2TAC2 916 aa17.97■□□□□ 0.47
PRPF40B-201ENST00000261897 KAZALD1Q96I82 304 aa17.97■□□□□ 0.47
PRPF40B-201ENST00000261897 PPANQ9NQ55 473 aaKnown RBP17.97■□□□□ 0.47
PRPF40B-201ENST00000261897 NEURL1BA8MQ27 555 aa17.97■□□□□ 0.47
PRPF40B-201ENST00000261897 CNGA4Q8IV77 575 aa17.97■□□□□ 0.47
PRPF40B-201ENST00000261897 ZC3H13Q5T200 1668 aaKnown RBP17.96■□□□□ 0.47
PRPF40B-201ENST00000261897 HGSO14964 777 aaPredicted RBP17.96■□□□□ 0.47
PRPF40B-201ENST00000261897 CEBPAP49715 358 aaPredicted RBP17.96■□□□□ 0.47
PRPF40B-201ENST00000261897 PUS3Q9BZE2 481 aaKnown RBP17.96■□□□□ 0.47
PRPF40B-201ENST00000261897 SMARCAL1Q9NZC9 954 aa17.96■□□□□ 0.47
PRPF40B-201ENST00000261897 MAGEC2Q9UBF1 373 aaPredicted RBP17.96■□□□□ 0.47
PRPF40B-201ENST00000261897 SAR1BQ9Y6B6 198 aa17.96■□□□□ 0.47
PRPF40B-201ENST00000261897 NEBLO76041 1014 aa17.96■□□□□ 0.47
PRPF40B-201ENST00000261897 NAA25Q14CX7 972 aa17.96■□□□□ 0.47
PRPF40B-201ENST00000261897 FCHSD1Q86WN1 690 aa17.96■□□□□ 0.47
PRPF40B-201ENST00000261897 KCNB2Q92953 911 aa17.96■□□□□ 0.47
PRPF40B-201ENST00000261897 KIFC2Q96AC6 838 aa17.96■□□□□ 0.47
PRPF40B-201ENST00000261897 CCDC114Q96M63 670 aa17.96■□□□□ 0.47
PRPF40B-201ENST00000261897 CHP1Q99653 195 aa17.96■□□□□ 0.47
PRPF40B-201ENST00000261897 MED4Q9NPJ6 270 aa17.96■□□□□ 0.47
PRPF40B-201ENST00000261897 EID1Q9Y6B2 187 aa17.96■□□□□ 0.47
PRPF40B-201ENST00000261897 MLKLQ8NB16 471 aa17.96■□□□□ 0.46
PRPF40B-201ENST00000261897 EPSTI1Q96J88 318 aa17.96■□□□□ 0.46
PRPF40B-201ENST00000261897 SENP2Q9HC62 589 aa17.96■□□□□ 0.46
PRPF40B-201ENST00000261897 BRMS1Q9HCU9 246 aa17.96■□□□□ 0.46
PRPF40B-201ENST00000261897 PLEKHG2Q9H7P9 1386 aa17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 MMS19Q96T76 1030 aa17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 HAUS7Q99871 368 aa17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 TTF2Q9UNY4 1162 aaKnown RBP17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 NPHP4O75161 1426 aaPredicted RBP17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 HSF2BPO75031 334 aa17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 PTPN12Q05209 780 aaKnown RBP17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 JAKMIP2Q96AA8 810 aa17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 SIRT1Q96EB6 747 aa17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 WWC3Q9ULE0 1092 aa17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 IGSF1Q8N6C5 1336 aa17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 MED23Q9ULK4 1368 aa17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 YEATS2Q9ULM3 1422 aa17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 INO80Q9ULG1 1556 aaPredicted RBP17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 GPAA1O43292 621 aa17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 MYO1BO43795 1136 aa17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 IFT88Q13099 833 aa17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 PROSER2Q86WR7 435 aaPredicted RBP17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 TEX2Q8IWB9 1127 aa17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 TEX13AQ9BXU3 409 aaPredicted RBP17.95■□□□□ 0.46
PRPF40B-201ENST00000261897 COL15A1P39059 1388 aa17.94■□□□□ 0.46
PRPF40B-201ENST00000261897 DDX21Q9NR30 783 aaKnown RBP eCLIP17.94■□□□□ 0.46
PRPF40B-201ENST00000261897 LUC7L2Q9Y383 392 aaKnown RBP17.94■□□□□ 0.46
PRPF40B-201ENST00000261897 PCDHB6Q9Y5E3 794 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms