RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 MAP3K14Q99558 947 aa13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 BCL2L12Q9HB09 334 aa13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 VPS54Q9P1Q0 977 aa13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 PNPLA7Q6ZV29 1317 aa13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 USP27XA6NNY8 438 aa13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 USP17L12C9JPN9 530 aa13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 USP17L21D6R901 530 aa13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 IFNAR1P17181 557 aa13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 PRDX5P30044 214 aa13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 LONRF3Q496Y0 759 aa13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 TXNRD3Q86VQ6 643 aa13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 NOSTRINQ8IVI9 506 aa13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 CABP5Q9NP86 173 aa13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 BSDC1Q9NW68 430 aaPredicted RBP13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 PCDHB6Q9Y5E3 794 aa13.08□□□□□ -0.32
SLC3A1-201ENST00000260649 DDX60Q8IY21 1712 aaKnown RBP13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 RIOK3O14730 519 aaKnown RBP13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 CYP2D6P10635 497 aa13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 ATP1A3P13637 1013 aa13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 LRRC8AQ8IWT6 810 aa13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 GRAMD1CQ8IYS0 662 aa13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 CRACR2BQ8N4Y2 399 aaPredicted RBP13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 ESR2Q92731 530 aa13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 GPR101Q96P66 508 aaPredicted RBP13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 XPO4Q9C0E2 1151 aaKnown RBP13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 RNF41Q9H4P4 317 aaPredicted RBP13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 ZPR1O75312 459 aa13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 PLEKHA8P1O95397 391 aa13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 MMP1P03956 469 aa13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 U2AF2P26368 475 aaKnown RBP eCLIP13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 TOB1P50616 345 aaPredicted RBP13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 RPS8P62241 208 aaKnown RBP13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 TMC6Q7Z403 805 aa13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 JMYQ8N9B5 988 aa13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 CNNM3Q8NE01 707 aa13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 RIOK1Q9BRS2 568 aaKnown RBP13.07□□□□□ -0.32
SLC3A1-201ENST00000260649 LRP5O75197 1615 aa13.06□□□□□ -0.32
SLC3A1-201ENST00000260649 DYNC1I1O14576 645 aa13.06□□□□□ -0.32
SLC3A1-201ENST00000260649 SKILP12757 684 aa13.06□□□□□ -0.32
SLC3A1-201ENST00000260649 NLRP12P59046 1061 aa13.06□□□□□ -0.32
SLC3A1-201ENST00000260649 AKAP17AQ02040 695 aaKnown RBP13.06□□□□□ -0.32
SLC3A1-201ENST00000260649 UBE4AQ14139 1066 aa13.06□□□□□ -0.32
SLC3A1-201ENST00000260649 ENAHQ8N8S7 591 aaPredicted RBP13.06□□□□□ -0.32
SLC3A1-201ENST00000260649 NLRP3Q96P20 1036 aa13.06□□□□□ -0.32
SLC3A1-201ENST00000260649 TNNT1P13805 278 aa13.06□□□□□ -0.32
SLC3A1-201ENST00000260649 MECOMQ03112 1051 aa13.06□□□□□ -0.32
SLC3A1-201ENST00000260649 IFIT1BQ5T764 474 aaKnown RBP13.06□□□□□ -0.32
SLC3A1-201ENST00000260649 SARM1Q6SZW1 724 aa13.06□□□□□ -0.32
SLC3A1-201ENST00000260649 MRFAP1L1Q96HT8 127 aa13.06□□□□□ -0.32
SLC3A1-201ENST00000260649 KCNH3Q9ULD8 1083 aa13.06□□□□□ -0.32
SLC3A1-201ENST00000260649 V9GY48 417 aaPredicted RBP13.06□□□□□ -0.32
SLC3A1-201ENST00000260649 SF3B3Q15393 1217 aaKnown RBP13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 ZNF827Q17R98 1081 aa13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 NOM1Q5C9Z4 860 aaKnown RBP13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 CLEC4GQ6UXB4 293 aa13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 BARGINQ6ZT62 677 aa13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 USP49Q70CQ1 688 aa13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 NBPF11Q86T75 865 aa13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 PHLPP1O60346 1717 aa13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 WASF1Q92558 559 aa13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 ZNF804BA4D1E1 1349 aa13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 BAZ2AQ9UIF9 1905 aaKnown RBP13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 POLR2DO15514 142 aaKnown RBP13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 PPP6R2O75170 966 aa13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 DEXIO95424 95 aa13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 CTR9Q6PD62 1173 aa13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 METTL16Q86W50 562 aaKnown RBP13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 FOXP4Q8IVH2 680 aaPredicted RBP13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 KRI1Q8N9T8 703 aaKnown RBP13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 SHISA4Q96DD7 197 aa13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 PRIMPOLQ96LW4 560 aa13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 ZSCAN10Q96SZ4 725 aaPredicted RBP13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 CCNL1Q9UK58 526 aaPredicted RBP13.05□□□□□ -0.32
SLC3A1-201ENST00000260649 AHDC1Q5TGY3 1603 aaPredicted RBP13.04□□□□□ -0.32
SLC3A1-201ENST00000260649 HIBADHP31937 336 aaKnown RBP13.04□□□□□ -0.32
SLC3A1-201ENST00000260649 GOLGA8FQ08AF8 430 aa13.04□□□□□ -0.32
SLC3A1-201ENST00000260649 GOLGA8DPQ0D2H9 430 aa13.04□□□□□ -0.32
SLC3A1-201ENST00000260649 EARS2Q5JPH6 523 aaKnown RBP13.04□□□□□ -0.32
SLC3A1-201ENST00000260649 RESP18Q5W5W9 173 aa13.04□□□□□ -0.32
SLC3A1-201ENST00000260649 PCDHA5Q9Y5H7 936 aa13.04□□□□□ -0.32
SLC3A1-201ENST00000260649 CHD4Q14839 1912 aa13.04□□□□□ -0.32
SLC3A1-201ENST00000260649 SEC23AQ15436 765 aa13.04□□□□□ -0.32
SLC3A1-201ENST00000260649 SERTAD1Q9UHV2 236 aa13.04□□□□□ -0.32
SLC3A1-201ENST00000260649 RTL9Q8NET4 1388 aa13.03□□□□□ -0.32
SLC3A1-201ENST00000260649 WNK3Q9BYP7 1800 aa13.03□□□□□ -0.32
SLC3A1-201ENST00000260649 CCDC196A0A1B0GTZ2 297 aa13.03□□□□□ -0.32
SLC3A1-201ENST00000260649 CUTAO60888 179 aa13.03□□□□□ -0.32
SLC3A1-201ENST00000260649 PRR29P0C7W0 189 aa13.03□□□□□ -0.32
SLC3A1-201ENST00000260649 CDC25BP30305 580 aa13.03□□□□□ -0.32
SLC3A1-201ENST00000260649 NSUN4Q96CB9 384 aaKnown RBP13.03□□□□□ -0.32
SLC3A1-201ENST00000260649 ANKIB1Q9P2G1 1089 aa13.03□□□□□ -0.32
SLC3A1-201ENST00000260649 HPSEQ9Y251 543 aa13.03□□□□□ -0.32
SLC3A1-201ENST00000260649 MYH2Q9UKX2 1941 aa13.03□□□□□ -0.32
SLC3A1-201ENST00000260649 BCL9LQ86UU0 1499 aa13.03□□□□□ -0.32
SLC3A1-201ENST00000260649 NCAPHQ15003 741 aa13.03□□□□□ -0.32
SLC3A1-201ENST00000260649 KRBA2Q6ZNG9 492 aa13.03□□□□□ -0.32
SLC3A1-201ENST00000260649 CATIPQ7Z7H3 387 aa13.03□□□□□ -0.32
SLC3A1-201ENST00000260649 IQCA1Q86XH1 822 aa13.03□□□□□ -0.32
SLC3A1-201ENST00000260649 TMTC2Q8N394 836 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms