RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 TMEM67Q5HYA8 995 aa19.69■□□□□ 0.74
HLA-F-216ENST00000259951 TTC6Q86TZ1 520 aa19.69■□□□□ 0.74
HLA-F-216ENST00000259951 STK11IPQ8N1F8 1099 aa19.69■□□□□ 0.74
HLA-F-216ENST00000259951 UBAC1Q9BSL1 405 aa19.69■□□□□ 0.74
HLA-F-216ENST00000259951 SAP30BPQ9UHR5 308 aaKnown RBP19.69■□□□□ 0.74
HLA-F-216ENST00000259951 SMC3Q9UQE7 1217 aa19.69■□□□□ 0.74
HLA-F-216ENST00000259951 RPS12P25398 132 aaKnown RBP19.68■□□□□ 0.74
HLA-F-216ENST00000259951 IQCA1Q86XH1 822 aa19.68■□□□□ 0.74
HLA-F-216ENST00000259951 GTF3C6Q969F1 213 aa19.68■□□□□ 0.74
HLA-F-216ENST00000259951 RANBP6O60518 1105 aaKnown RBP19.67■□□□□ 0.74
HLA-F-216ENST00000259951 PICALMQ13492 652 aa19.67■□□□□ 0.74
HLA-F-216ENST00000259951 NECAB1Q8N987 351 aa19.67■□□□□ 0.74
HLA-F-216ENST00000259951 IGDCC4Q8TDY8 1250 aa19.67■□□□□ 0.74
HLA-F-216ENST00000259951 IDI2Q9BXS1 227 aa19.67■□□□□ 0.74
HLA-F-216ENST00000259951 NAP1L2Q9ULW6 460 aaPredicted RBP19.67■□□□□ 0.74
HLA-F-216ENST00000259951 KLF18A0A0U1RQI7 1052 aa19.66■□□□□ 0.74
HLA-F-216ENST00000259951 STK3Q13188 491 aa19.66■□□□□ 0.74
HLA-F-216ENST00000259951 DLGAP5Q15398 846 aa19.66■□□□□ 0.74
HLA-F-216ENST00000259951 ARHGAP27Q6ZUM4 889 aa19.66■□□□□ 0.74
HLA-F-216ENST00000259951 SGMS1Q86VZ5 419 aa19.66■□□□□ 0.74
HLA-F-216ENST00000259951 LLPHQ9BRT6 129 aaKnown RBP19.66■□□□□ 0.74
HLA-F-216ENST00000259951 MKNK2Q9HBH9 465 aa19.66■□□□□ 0.74
HLA-F-216ENST00000259951 TMOD2Q9NZR1 351 aa19.66■□□□□ 0.74
HLA-F-216ENST00000259951 TAOK2Q9UL54 1235 aa19.66■□□□□ 0.74
HLA-F-216ENST00000259951 FZD9O00144 591 aa19.65■□□□□ 0.74
HLA-F-216ENST00000259951 DHX16O60231 1041 aaKnown RBP19.65■□□□□ 0.74
HLA-F-216ENST00000259951 PDIA4P13667 645 aaKnown RBP19.65■□□□□ 0.74
HLA-F-216ENST00000259951 PDIA3P30101 505 aaKnown RBP19.65■□□□□ 0.74
HLA-F-216ENST00000259951 WTAPQ15007 396 aa19.65■□□□□ 0.74
HLA-F-216ENST00000259951 NFXL1Q6ZNB6 911 aa19.65■□□□□ 0.74
HLA-F-216ENST00000259951 MTMR14Q8NCE2 650 aa19.65■□□□□ 0.74
HLA-F-216ENST00000259951 OSBPL5Q9H0X9 879 aaPredicted RBP19.65■□□□□ 0.74
HLA-F-216ENST00000259951 LY9Q9HBG7 655 aa19.65■□□□□ 0.74
HLA-F-216ENST00000259951 MYH8P13535 1937 aa19.65■□□□□ 0.74
HLA-F-216ENST00000259951 CCDC69A6NI79 296 aa19.65■□□□□ 0.74
HLA-F-216ENST00000259951 PRDM1O75626 825 aa19.65■□□□□ 0.74
HLA-F-216ENST00000259951 HLA-DOAP06340 250 aa19.65■□□□□ 0.74
HLA-F-216ENST00000259951 PLCD1P51178 756 aa19.65■□□□□ 0.74
HLA-F-216ENST00000259951 CCDC178Q5BJE1 867 aa19.65■□□□□ 0.74
HLA-F-216ENST00000259951 SYNE3Q6ZMZ3 975 aa19.65■□□□□ 0.74
HLA-F-216ENST00000259951 C16orf86Q6ZW13 317 aa19.65■□□□□ 0.74
HLA-F-216ENST00000259951 ZNF444Q8N0Y2 327 aaPredicted RBP19.65■□□□□ 0.74
HLA-F-216ENST00000259951 DHX36Q9H2U1 1008 aaKnown RBP19.65■□□□□ 0.74
HLA-F-216ENST00000259951 GPHNQ9NQX3 736 aaPredicted RBP19.65■□□□□ 0.74
HLA-F-216ENST00000259951 ZBTB12Q9Y330 459 aaPredicted RBP19.65■□□□□ 0.74
HLA-F-216ENST00000259951 SBF1O95248 1867 aa19.64■□□□□ 0.74
HLA-F-216ENST00000259951 SPDYE2BA6NHP3 402 aa19.64■□□□□ 0.73
HLA-F-216ENST00000259951 TSPY2A6NKD2 308 aa19.64■□□□□ 0.73
HLA-F-216ENST00000259951 GOLGA8BA8MQT2 603 aa19.64■□□□□ 0.73
HLA-F-216ENST00000259951 SMIM22K7EJ46 135 aa19.64■□□□□ 0.73
HLA-F-216ENST00000259951 SPDYE6P0CI01 402 aa19.64■□□□□ 0.73
HLA-F-216ENST00000259951 LMNB1P20700 586 aa19.64■□□□□ 0.73
HLA-F-216ENST00000259951 ZSCAN10Q96SZ4 725 aaPredicted RBP19.64■□□□□ 0.73
HLA-F-216ENST00000259951 DDX4Q9NQI0 724 aaKnown RBP19.64■□□□□ 0.73
HLA-F-216ENST00000259951 ST3GAL1Q11201 340 aa19.63■□□□□ 0.73
HLA-F-216ENST00000259951 SCRN1Q12765 414 aa19.63■□□□□ 0.73
HLA-F-216ENST00000259951 GPR162Q16538 588 aa19.63■□□□□ 0.73
HLA-F-216ENST00000259951 SLC4A8Q2Y0W8 1093 aa19.63■□□□□ 0.73
HLA-F-216ENST00000259951 NKX2-3Q8TAU0 364 aa19.63■□□□□ 0.73
HLA-F-216ENST00000259951 PRMT6Q96LA8 375 aaPredicted RBP19.63■□□□□ 0.73
HLA-F-216ENST00000259951 SWAP70Q9UH65 585 aa19.63■□□□□ 0.73
HLA-F-216ENST00000259951 BRPF3Q9ULD4 1205 aa19.63■□□□□ 0.73
HLA-F-216ENST00000259951 SLC12A7Q9Y666 1083 aa19.63■□□□□ 0.73
HLA-F-216ENST00000259951 TNKSO95271 1327 aa19.63■□□□□ 0.73
HLA-F-216ENST00000259951 ENTPD3O75355 529 aa19.62■□□□□ 0.73
HLA-F-216ENST00000259951 CDK8P49336 464 aa19.62■□□□□ 0.73
HLA-F-216ENST00000259951 RCAN1P53805 252 aa19.62■□□□□ 0.73
HLA-F-216ENST00000259951 RAB3GAP1Q15042 981 aa19.62■□□□□ 0.73
HLA-F-216ENST00000259951 DPF2Q92785 391 aa19.62■□□□□ 0.73
HLA-F-216ENST00000259951 DYNLL2Q96FJ2 89 aa19.62■□□□□ 0.73
HLA-F-216ENST00000259951 TDRD3Q9H7E2 651 aaKnown RBP19.62■□□□□ 0.73
HLA-F-216ENST00000259951 PCDHAC2Q9Y5I4 1007 aa19.62■□□□□ 0.73
HLA-F-216ENST00000259951 ZBTB43O43298 467 aa19.62■□□□□ 0.73
HLA-F-216ENST00000259951 MYO1BO43795 1136 aa19.62■□□□□ 0.73
HLA-F-216ENST00000259951 PDCP20941 246 aa19.62■□□□□ 0.73
HLA-F-216ENST00000259951 GJB2P29033 226 aa19.62■□□□□ 0.73
HLA-F-216ENST00000259951 EVX2Q03828 476 aa19.62■□□□□ 0.73
HLA-F-216ENST00000259951 NFIAQ12857 509 aa19.62■□□□□ 0.73
HLA-F-216ENST00000259951 APOA5Q6Q788 366 aa19.62■□□□□ 0.73
HLA-F-216ENST00000259951 ZKSCAN3Q9BRR0 538 aa19.62■□□□□ 0.73
HLA-F-216ENST00000259951 EHD4Q9H223 541 aa19.62■□□□□ 0.73
HLA-F-216ENST00000259951 KIF3AQ9Y496 699 aa19.62■□□□□ 0.73
HLA-F-216ENST00000259951 COL2A1P02458 1487 aaPredicted RBP19.61■□□□□ 0.73
HLA-F-216ENST00000259951 YY1P25490 414 aa19.61■□□□□ 0.73
HLA-F-216ENST00000259951 PRELPP51888 382 aa19.61■□□□□ 0.73
HLA-F-216ENST00000259951 CCT2P78371 535 aaKnown RBP19.61■□□□□ 0.73
HLA-F-216ENST00000259951 HMGN5P82970 282 aaKnown RBP19.61■□□□□ 0.73
HLA-F-216ENST00000259951 TFAP4Q01664 338 aa19.61■□□□□ 0.73
HLA-F-216ENST00000259951 SEC23AQ15436 765 aa19.61■□□□□ 0.73
HLA-F-216ENST00000259951 CPLX2Q6PUV4 134 aaKnown RBP19.61■□□□□ 0.73
HLA-F-216ENST00000259951 SERPINB13Q9UIV8 391 aa19.61■□□□□ 0.73
HLA-F-216ENST00000259951 TSPY3P0CV98 308 aa19.6■□□□□ 0.73
HLA-F-216ENST00000259951 TSPY8P0CW00 308 aa19.6■□□□□ 0.73
HLA-F-216ENST00000259951 METAP2P50579 478 aaKnown RBP eCLIP19.6■□□□□ 0.73
HLA-F-216ENST00000259951 ZNF280AP59817 542 aaPredicted RBP19.6■□□□□ 0.73
HLA-F-216ENST00000259951 IFIT1BQ5T764 474 aaKnown RBP19.6■□□□□ 0.73
HLA-F-216ENST00000259951 FKBP1CQ5VVH2 108 aa19.6■□□□□ 0.73
HLA-F-216ENST00000259951 ENAHQ8N8S7 591 aaPredicted RBP19.6■□□□□ 0.73
HLA-F-216ENST00000259951 TCP11L1Q9NUJ3 509 aa19.6■□□□□ 0.73
HLA-F-216ENST00000259951 FAM198AQ9UFP1 575 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms