RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 PCCAP05165 728 aaPredicted RBP5.4□□□□□ -1.55
USP44-201ENST00000258499 DNA2P51530 1060 aa5.4□□□□□ -1.55
USP44-201ENST00000258499 CAVIN4Q5BKX8 364 aa5.4□□□□□ -1.55
USP44-201ENST00000258499 AXDND1Q5T1B0 1012 aaPredicted RBP5.4□□□□□ -1.55
USP44-201ENST00000258499 ILDR1Q86SU0 546 aaPredicted RBP5.4□□□□□ -1.55
USP44-201ENST00000258499 GOLGA1Q92805 767 aa5.4□□□□□ -1.55
USP44-201ENST00000258499 OSBPL5Q9H0X9 879 aaPredicted RBP5.4□□□□□ -1.55
USP44-201ENST00000258499 CALCOCO1Q9P1Z2 691 aa5.4□□□□□ -1.55
USP44-201ENST00000258499 NIP7Q9Y221 180 aaKnown RBP eCLIP5.4□□□□□ -1.55
USP44-201ENST00000258499 PCDHB6Q9Y5E3 794 aa5.4□□□□□ -1.55
USP44-201ENST00000258499 MROH7-TTC4A0A0A0MT08 1334 aa5.4□□□□□ -1.55
USP44-201ENST00000258499 ERVV-2B6SEH9 535 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 EXOC5O00471 708 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 DEXIO95424 95 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 AMOTL1Q8IY63 956 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 ZNF654Q8IZM8 581 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 KLHL34Q8N239 644 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 MLKLQ8NB16 471 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 NEK11Q8NG66 645 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 LPIN2Q92539 896 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 ZNHIT6Q9NWK9 470 aaKnown RBP5.39□□□□□ -1.55
USP44-201ENST00000258499 GUCA1BQ9UMX6 200 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 CTNND2Q9UQB3 1225 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 ZBTB1Q9Y2K1 713 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.39□□□□□ -1.55
USP44-201ENST00000258499 NEDD4P46934 1319 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 C3P01024 1663 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 MAGEB6P1A0A0J9YX57 407 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 PATL2C9JE40 543 aaKnown RBP5.39□□□□□ -1.55
USP44-201ENST00000258499 IKBKBO14920 756 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 PDE8AO60658 829 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 EIF3JO75822 258 aaKnown RBP5.39□□□□□ -1.55
USP44-201ENST00000258499 ADAMTS2O95450 1211 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 GUCY1A2P33402 732 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 STIM1Q13586 685 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 TMTC2Q8N394 836 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 TTLL11Q8NHH1 800 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 SEC31BQ9NQW1 1179 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 PODXL2Q9NZ53 605 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 PRDM4Q9UKN5 801 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 HPS5Q9UPZ3 1129 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 SYNRGQ9UMZ2 1314 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 CCDC194A0A1B0GVG4 234 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 CDC25AP30304 524 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 KRT2P35908 639 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 UBA7P41226 1012 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 TAF3Q5VWG9 929 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 CCDC70Q6NSX1 233 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 PIK3AP1Q6ZUJ8 805 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 NYAP1Q6ZVC0 841 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 CCDC24Q8N4L8 307 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 FANCBQ8NB91 859 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 LRRN4CLQ8ND94 238 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 CAPZA3Q96KX2 299 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 DRC1Q96MC2 740 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 IRX2Q9BZI1 471 aaPredicted RBP5.39□□□□□ -1.55
USP44-201ENST00000258499 CSRNP2Q9H175 543 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 ACBD3Q9H3P7 528 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 DEF6Q9H4E7 631 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 BTG4Q9NY30 223 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 TAB2Q9NYJ8 693 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 MAN1B1Q9UKM7 699 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 STX8Q9UNK0 236 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 ADGRL3Q9HAR2 1447 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 TMEM94Q12767 1356 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 CYP2D7A0A087X1C5 515 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 CTAGE9A4FU28 777 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 SOWAHDA6NJG2 315 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 NUTM2BA6NNL0 878 aaPredicted RBP5.39□□□□□ -1.55
USP44-201ENST00000258499 NUTM2EB1AL46 878 aaPredicted RBP5.39□□□□□ -1.55
USP44-201ENST00000258499 PPP6R2O75170 966 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 SSBP05455 408 aaKnown RBP eCLIP5.39□□□□□ -1.55
USP44-201ENST00000258499 PRR29P0C7W0 189 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 ERCC3P19447 782 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 OAS2P29728 719 aaKnown RBP5.39□□□□□ -1.55
USP44-201ENST00000258499 CHMP4BP1P59074 171 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 SYCP1Q15431 976 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 TERF2Q15554 542 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 ENOX2Q16206 610 aaKnown RBP5.39□□□□□ -1.55
USP44-201ENST00000258499 CCDC152Q4G0S7 254 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 GIGYF2Q6Y7W6 1299 aaKnown RBP5.39□□□□□ -1.55
USP44-201ENST00000258499 NBPF11Q86T75 865 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 VSTM4Q8IW00 320 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 EPSTI1Q96J88 318 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 TRIM47Q96LD4 638 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 MKNK2Q9HBH9 465 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 VAT1LQ9HCJ6 419 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 ZCCHC17Q9NP64 241 aaKnown RBP5.39□□□□□ -1.55
USP44-201ENST00000258499 VPS18Q9P253 973 aa5.39□□□□□ -1.55
USP44-201ENST00000258499 PALLDQ8WX93 1383 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 RIMBP3CA6NJZ7 1639 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 RIMBP3BA6NNM3 1639 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 RIMBP3Q9UFD9 1639 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 TNKSO95271 1327 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 CTAGE15A4D2H0 777 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 TUBB4AP04350 444 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 CTAGE8P0CG41 777 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 PNMA6AP0CW24 399 aaPredicted RBP5.38□□□□□ -1.55
USP44-201ENST00000258499 ATP6V1AP38606 617 aa5.38□□□□□ -1.55
USP44-201ENST00000258499 STAT6P42226 847 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms