RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 MAP3K9P80192 1104 aa13.94□□□□□ -0.18
USP30-201ENST00000257548 SLC39A14Q15043 492 aa13.94□□□□□ -0.18
USP30-201ENST00000257548 CNGA4Q8IV77 575 aa13.94□□□□□ -0.18
USP30-201ENST00000257548 ANKRD18AQ8IVF6 992 aa13.94□□□□□ -0.18
USP30-201ENST00000257548 FAM71BQ8TC56 605 aa13.94□□□□□ -0.18
USP30-201ENST00000257548 BRMS1Q9HCU9 246 aa13.94□□□□□ -0.18
USP30-201ENST00000257548 ABCF2Q9UG63 623 aa13.94□□□□□ -0.18
USP30-201ENST00000257548 IQSEC3Q9UPP2 1182 aaPredicted RBP13.94□□□□□ -0.18
USP30-201ENST00000257548 USP6P35125 1406 aa13.94□□□□□ -0.18
USP30-201ENST00000257548 A0A0U1RQJ8 604 aa13.93□□□□□ -0.18
USP30-201ENST00000257548 PLEKHG3A1L390 1219 aa13.93□□□□□ -0.18
USP30-201ENST00000257548 IKBKBO14920 756 aa13.93□□□□□ -0.18
USP30-201ENST00000257548 TDRD12Q587J7 1177 aaKnown RBP13.93□□□□□ -0.18
USP30-201ENST00000257548 GPTP24298 496 aa13.93□□□□□ -0.18
USP30-201ENST00000257548 NF2P35240 595 aa13.93□□□□□ -0.18
USP30-201ENST00000257548 PAFAH1B1P43034 410 aa13.93□□□□□ -0.18
USP30-201ENST00000257548 KIF23Q02241 960 aaPredicted RBP13.93□□□□□ -0.18
USP30-201ENST00000257548 ZNF174Q15697 407 aa13.93□□□□□ -0.18
USP30-201ENST00000257548 TRIM65Q6PJ69 517 aa13.93□□□□□ -0.18
USP30-201ENST00000257548 ANKRD13CQ8N6S4 541 aa13.93□□□□□ -0.18
USP30-201ENST00000257548 NOA1Q8NC60 698 aaKnown RBP13.93□□□□□ -0.18
USP30-201ENST00000257548 TRIM47Q96LD4 638 aa13.93□□□□□ -0.18
USP30-201ENST00000257548 TFR2Q9UP52 801 aa13.93□□□□□ -0.18
USP30-201ENST00000257548 DLC1Q96QB1 1528 aa13.93□□□□□ -0.18
USP30-201ENST00000257548 MARCH6O60337 910 aa13.93□□□□□ -0.18
USP30-201ENST00000257548 GIGYF1O75420 1035 aaPredicted RBP13.93□□□□□ -0.18
USP30-201ENST00000257548 CABP4P57796 275 aa13.93□□□□□ -0.18
USP30-201ENST00000257548 PACS2Q86VP3 889 aa13.93□□□□□ -0.18
USP30-201ENST00000257548 HELBQ8NG08 1087 aaPredicted RBP13.93□□□□□ -0.18
USP30-201ENST00000257548 ZNF274Q96GC6 653 aaPredicted RBP13.93□□□□□ -0.18
USP30-201ENST00000257548 DDX21Q9NR30 783 aaKnown RBP eCLIP13.93□□□□□ -0.18
USP30-201ENST00000257548 POLR3EQ9NVU0 708 aa13.93□□□□□ -0.18
USP30-201ENST00000257548 LUC7L2Q9Y383 392 aaKnown RBP13.93□□□□□ -0.18
USP30-201ENST00000257548 SYNRGQ9UMZ2 1314 aa13.93□□□□□ -0.18
USP30-201ENST00000257548 AKR1B10O60218 316 aa13.92□□□□□ -0.18
USP30-201ENST00000257548 HSF2BPO75031 334 aa13.92□□□□□ -0.18
USP30-201ENST00000257548 PDE4BQ07343 736 aa13.92□□□□□ -0.18
USP30-201ENST00000257548 MLKLQ8NB16 471 aa13.92□□□□□ -0.18
USP30-201ENST00000257548 C19orf44Q9H6X5 657 aa13.92□□□□□ -0.18
USP30-201ENST00000257548 INCENPQ9NQS7 918 aa13.92□□□□□ -0.18
USP30-201ENST00000257548 CXCR5P32302 372 aa13.92□□□□□ -0.18
USP30-201ENST00000257548 PTPROQ16827 1216 aa13.92□□□□□ -0.18
USP30-201ENST00000257548 CCDC114Q96M63 670 aa13.92□□□□□ -0.18
USP30-201ENST00000257548 CDK12Q9NYV4 1490 aaPredicted RBP13.92□□□□□ -0.18
USP30-201ENST00000257548 AATKQ6ZMQ8 1374 aa13.92□□□□□ -0.18
USP30-201ENST00000257548 GPAA1O43292 621 aa13.92□□□□□ -0.18
USP30-201ENST00000257548 MCM3P25205 808 aa13.92□□□□□ -0.18
USP30-201ENST00000257548 MTIF2P46199 727 aaKnown RBP13.92□□□□□ -0.18
USP30-201ENST00000257548 ARID5AQ03989 594 aa13.92□□□□□ -0.18
USP30-201ENST00000257548 MUM1L1Q5H9M0 696 aa13.92□□□□□ -0.18
USP30-201ENST00000257548 IQCEQ6IPM2 695 aa13.92□□□□□ -0.18
USP30-201ENST00000257548 TADA2BQ86TJ2 420 aa13.92□□□□□ -0.18
USP30-201ENST00000257548 ZNF526Q8TF50 670 aaPredicted RBP13.92□□□□□ -0.18
USP30-201ENST00000257548 CCDC113Q9H0I3 377 aa13.92□□□□□ -0.18
USP30-201ENST00000257548 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.92□□□□□ -0.18
USP30-201ENST00000257548 HGSO14964 777 aaPredicted RBP13.91□□□□□ -0.18
USP30-201ENST00000257548 RANBP6O60518 1105 aaKnown RBP13.91□□□□□ -0.18
USP30-201ENST00000257548 SLC7A5Q01650 507 aa13.91□□□□□ -0.18
USP30-201ENST00000257548 NR5A1Q13285 461 aa13.91□□□□□ -0.18
USP30-201ENST00000257548 LRRC24Q50LG9 513 aa13.91□□□□□ -0.18
USP30-201ENST00000257548 THEMISQ8N1K5 641 aaPredicted RBP13.91□□□□□ -0.18
USP30-201ENST00000257548 ANKRD24Q8TF21 1146 aa13.91□□□□□ -0.18
USP30-201ENST00000257548 ANGEL1Q9UNK9 670 aaKnown RBP13.91□□□□□ -0.18
USP30-201ENST00000257548 SAR1BQ9Y6B6 198 aa13.91□□□□□ -0.18
USP30-201ENST00000257548 NEURL1BA8MQ27 555 aa13.91□□□□□ -0.18
USP30-201ENST00000257548 TULP2O00295 520 aa13.91□□□□□ -0.18
USP30-201ENST00000257548 MAN1B1Q9UKM7 699 aa13.91□□□□□ -0.18
USP30-201ENST00000257548 TTF2Q9UNY4 1162 aaKnown RBP13.91□□□□□ -0.18
USP30-201ENST00000257548 CEP131Q9UPN4 1083 aa13.91□□□□□ -0.18
USP30-201ENST00000257548 KRT86O43790 486 aa13.91□□□□□ -0.18
USP30-201ENST00000257548 PRR29P0C7W0 189 aa13.91□□□□□ -0.18
USP30-201ENST00000257548 ATP6V1AP38606 617 aa13.91□□□□□ -0.18
USP30-201ENST00000257548 FMR1Q06787 632 aaKnown RBP eCLIP13.91□□□□□ -0.18
USP30-201ENST00000257548 SHC4Q6S5L8 630 aa13.91□□□□□ -0.18
USP30-201ENST00000257548 CAPS2Q9BXY5 557 aa13.91□□□□□ -0.18
USP30-201ENST00000257548 PPANQ9NQ55 473 aaKnown RBP13.91□□□□□ -0.18
USP30-201ENST00000257548 TRIM10Q9UDY6 481 aa13.91□□□□□ -0.18
USP30-201ENST00000257548 UBE2Q2LH0YL09 131 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 GBP2P32456 591 aaPredicted RBP13.9□□□□□ -0.18
USP30-201ENST00000257548 KIF5AQ12840 1032 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 CCDC93Q567U6 631 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 SMARCC2Q8TAQ2 1214 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 OSBP2Q969R2 916 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 CTAGE1Q96RT6 745 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 AKAP2Q9Y2D5 859 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 PPFIA4O75335 1185 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 FDPSP14324 419 aaKnown RBP13.9□□□□□ -0.18
USP30-201ENST00000257548 GGCXP38435 758 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 GUCY2FP51841 1108 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 NAA25Q14CX7 972 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 E2F5Q15329 346 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 LDHAL6AQ6ZMR3 332 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 EP400NLQ6ZTU2 488 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 WWC3Q9ULE0 1092 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 TRIM75PA6NK02 468 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 ZAP70P43403 619 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 CYP27A1Q02318 531 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 NCAPHQ15003 741 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 RAD9BQ6WBX8 426 aa13.9□□□□□ -0.18
USP30-201ENST00000257548 CTCFLQ8NI51 663 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms