RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 NFXL1Q6ZNB6 911 aa12.96□□□□□ -0.33
PDE6B-201ENST00000255622 AIDAQ96BJ3 306 aa12.96□□□□□ -0.33
PDE6B-201ENST00000255622 CCDC97Q96F63 343 aaPredicted RBP12.96□□□□□ -0.33
PDE6B-201ENST00000255622 CLIC6Q96NY7 704 aa12.96□□□□□ -0.33
PDE6B-201ENST00000255622 NAT10Q9H0A0 1025 aaKnown RBP12.96□□□□□ -0.33
PDE6B-201ENST00000255622 SLC24A3Q9HC58 644 aa12.96□□□□□ -0.33
PDE6B-201ENST00000255622 MYH3P11055 1940 aa12.96□□□□□ -0.33
PDE6B-201ENST00000255622 CTIFO43310 598 aaKnown RBP12.96□□□□□ -0.34
PDE6B-201ENST00000255622 SMC2O95347 1197 aa12.96□□□□□ -0.34
PDE6B-201ENST00000255622 ZRSR1Q15695 479 aaKnown RBP12.96□□□□□ -0.34
PDE6B-201ENST00000255622 MAGEB6Q8N7X4 407 aa12.96□□□□□ -0.34
PDE6B-201ENST00000255622 STRBPQ96SI9 672 aaKnown RBP12.96□□□□□ -0.34
PDE6B-201ENST00000255622 XPO4Q9C0E2 1151 aaKnown RBP12.96□□□□□ -0.34
PDE6B-201ENST00000255622 ARMT1Q9H993 441 aa12.96□□□□□ -0.34
PDE6B-201ENST00000255622 BIN2Q9UBW5 565 aaPredicted RBP12.96□□□□□ -0.34
PDE6B-201ENST00000255622 LRP6O75581 1613 aa12.95□□□□□ -0.34
PDE6B-201ENST00000255622 ATRNO75882 1429 aa12.95□□□□□ -0.34
PDE6B-201ENST00000255622 TTF1Q15361 905 aaPredicted RBP12.95□□□□□ -0.34
PDE6B-201ENST00000255622 DZIP3Q86Y13 1208 aaKnown RBP12.95□□□□□ -0.34
PDE6B-201ENST00000255622 IGDCC4Q8TDY8 1250 aa12.95□□□□□ -0.34
PDE6B-201ENST00000255622 ZKSCAN3Q9BRR0 538 aa12.95□□□□□ -0.34
PDE6B-201ENST00000255622 IFNKQ9P0W0 207 aa12.95□□□□□ -0.34
PDE6B-201ENST00000255622 ECM29Q5VYK3 1845 aa12.95□□□□□ -0.34
PDE6B-201ENST00000255622 PRKAB2O43741 272 aa12.95□□□□□ -0.34
PDE6B-201ENST00000255622 MBD4O95243 580 aa12.95□□□□□ -0.34
PDE6B-201ENST00000255622 ATP2B1P20020 1258 aa12.95□□□□□ -0.34
PDE6B-201ENST00000255622 NCBP1Q09161 790 aaKnown RBP12.95□□□□□ -0.34
PDE6B-201ENST00000255622 GNL2Q13823 731 aaKnown RBP12.95□□□□□ -0.34
PDE6B-201ENST00000255622 RASGRF1Q13972 1273 aa12.95□□□□□ -0.34
PDE6B-201ENST00000255622 UBE3CQ15386 1083 aa12.95□□□□□ -0.34
PDE6B-201ENST00000255622 ZC3H12AQ5D1E8 599 aaKnown RBP12.95□□□□□ -0.34
PDE6B-201ENST00000255622 LY9Q9HBG7 655 aa12.95□□□□□ -0.34
PDE6B-201ENST00000255622 SEC31BQ9NQW1 1179 aa12.95□□□□□ -0.34
PDE6B-201ENST00000255622 FAM217BQ9NTX9 383 aaPredicted RBP12.95□□□□□ -0.34
PDE6B-201ENST00000255622 PDE8AO60658 829 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 PTPN21Q16825 1174 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 TMEM67Q5HYA8 995 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 CEP135Q66GS9 1140 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 CC2D2BQ6DHV5 1058 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 SHC4Q6S5L8 630 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 ITFG2Q969R8 447 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 NUP98P52948 1817 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 WDR19Q8NEZ3 1342 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 SMTNL1A8MU46 457 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 ZBTB43O43298 467 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 RBM6P78332 1123 aaKnown RBP12.94□□□□□ -0.34
PDE6B-201ENST00000255622 SLC39A14Q15043 492 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 PUM3Q15397 648 aaKnown RBP12.94□□□□□ -0.34
PDE6B-201ENST00000255622 CMTR1Q8N1G2 835 aaKnown RBP12.94□□□□□ -0.34
PDE6B-201ENST00000255622 CCDC82Q8N4S0 544 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 SPATA5Q8NB90 893 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 ZSWIM5Q9P217 1185 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 MORC2Q9Y6X9 1032 aaPredicted RBP12.94□□□□□ -0.34
PDE6B-201ENST00000255622 BCL9O00512 1426 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 GOLGA8AA7E2F4 631 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 ATP1A3P13637 1013 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 CMA1P23946 247 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 LMOD1P29536 600 aaPredicted RBP12.94□□□□□ -0.34
PDE6B-201ENST00000255622 GUCY1A2P33402 732 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 PNOCQ13519 176 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 NTRK3Q16288 839 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 RRP12Q5JTH9 1297 aaKnown RBP12.94□□□□□ -0.34
PDE6B-201ENST00000255622 SPECC1Q5M775 1068 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 MFSD4BQ5TF39 518 aa12.94□□□□□ -0.34
PDE6B-201ENST00000255622 ZNF512BQ96KM6 892 aaPredicted RBP12.94□□□□□ -0.34
PDE6B-201ENST00000255622 ANKRD36CQ5JPF3 1778 aa12.93□□□□□ -0.34
PDE6B-201ENST00000255622 CYP2C19P33261 490 aa12.93□□□□□ -0.34
PDE6B-201ENST00000255622 NCAPHQ15003 741 aa12.93□□□□□ -0.34
PDE6B-201ENST00000255622 TMC6Q7Z403 805 aa12.93□□□□□ -0.34
PDE6B-201ENST00000255622 KIF18AQ8NI77 898 aa12.93□□□□□ -0.34
PDE6B-201ENST00000255622 SLC26A6Q9BXS9 759 aa12.93□□□□□ -0.34
PDE6B-201ENST00000255622 FGFR2P21802 821 aa12.93□□□□□ -0.34
PDE6B-201ENST00000255622 PTPAQ15257 358 aa12.93□□□□□ -0.34
PDE6B-201ENST00000255622 CCDC96Q2M329 555 aa12.93□□□□□ -0.34
PDE6B-201ENST00000255622 IFNL3Q8IZI9 196 aa12.93□□□□□ -0.34
PDE6B-201ENST00000255622 LPIN2Q92539 896 aa12.93□□□□□ -0.34
PDE6B-201ENST00000255622 MAP3K14Q99558 947 aa12.93□□□□□ -0.34
PDE6B-201ENST00000255622 NAPBQ9H115 298 aa12.93□□□□□ -0.34
PDE6B-201ENST00000255622 ZNF446Q9NWS9 450 aa12.93□□□□□ -0.34
PDE6B-201ENST00000255622 IARSP41252 1262 aaKnown RBP12.93□□□□□ -0.34
PDE6B-201ENST00000255622 SYKP43405 635 aa12.93□□□□□ -0.34
PDE6B-201ENST00000255622 NLRP12P59046 1061 aa12.93□□□□□ -0.34
PDE6B-201ENST00000255622 SUSD4Q5VX71 490 aa12.93□□□□□ -0.34
PDE6B-201ENST00000255622 CCDC112Q8NEF3 446 aa12.93□□□□□ -0.34
PDE6B-201ENST00000255622 IQSEC3Q9UPP2 1182 aaPredicted RBP12.93□□□□□ -0.34
PDE6B-201ENST00000255622 SMIM22K7EJ46 135 aa12.92□□□□□ -0.34
PDE6B-201ENST00000255622 IFIT3O14879 490 aaKnown RBP12.92□□□□□ -0.34
PDE6B-201ENST00000255622 BCAMP50895 628 aa12.92□□□□□ -0.34
PDE6B-201ENST00000255622 ARMCX5Q6P1M9 558 aa12.92□□□□□ -0.34
PDE6B-201ENST00000255622 MIGA1Q8NAN2 632 aa12.92□□□□□ -0.34
PDE6B-201ENST00000255622 NUCKS1Q9H1E3 243 aaKnown RBP12.92□□□□□ -0.34
PDE6B-201ENST00000255622 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.92□□□□□ -0.34
PDE6B-201ENST00000255622 V9GYY5 206 aaPredicted RBP12.92□□□□□ -0.34
PDE6B-201ENST00000255622 POLR3GO15318 223 aaPredicted RBP12.92□□□□□ -0.34
PDE6B-201ENST00000255622 NAIF1Q69YI7 327 aaPredicted RBP12.92□□□□□ -0.34
PDE6B-201ENST00000255622 LCORLQ8N3X6 602 aa12.92□□□□□ -0.34
PDE6B-201ENST00000255622 HSD3B7Q9H2F3 369 aa12.92□□□□□ -0.34
PDE6B-201ENST00000255622 FOXN1O15353 648 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 CDKL5O76039 1030 aa12.91□□□□□ -0.34
PDE6B-201ENST00000255622 PTPN14Q15678 1187 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms