RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 SH2B2O14492 632 aaPredicted RBP11.13□□□□□ -0.63
NIP7-202ENST00000254941 PFKFB2O60825 505 aa11.13□□□□□ -0.63
NIP7-202ENST00000254941 WDHD1O75717 1129 aaPredicted RBP11.13□□□□□ -0.63
NIP7-202ENST00000254941 CYP2D6P10635 497 aa11.13□□□□□ -0.63
NIP7-202ENST00000254941 PDIA3P30101 505 aaKnown RBP11.13□□□□□ -0.63
NIP7-202ENST00000254941 LIFRP42702 1097 aa11.13□□□□□ -0.63
NIP7-202ENST00000254941 NT5C2P49902 561 aa11.13□□□□□ -0.63
NIP7-202ENST00000254941 PDE4BQ07343 736 aa11.13□□□□□ -0.63
NIP7-202ENST00000254941 RRP12Q5JTH9 1297 aaKnown RBP11.13□□□□□ -0.63
NIP7-202ENST00000254941 STK11IPQ8N1F8 1099 aa11.13□□□□□ -0.63
NIP7-202ENST00000254941 TOMM22Q9NS69 142 aa11.13□□□□□ -0.63
NIP7-202ENST00000254941 USP40Q9NVE5 1235 aa11.13□□□□□ -0.63
NIP7-202ENST00000254941 NUCB2P80303 420 aa11.12□□□□□ -0.63
NIP7-202ENST00000254941 CXCL9Q07325 125 aa11.12□□□□□ -0.63
NIP7-202ENST00000254941 STK3Q13188 491 aa11.12□□□□□ -0.63
NIP7-202ENST00000254941 SGMS1Q86VZ5 419 aa11.12□□□□□ -0.63
NIP7-202ENST00000254941 AGBL3Q8NEM8 1001 aa11.12□□□□□ -0.63
NIP7-202ENST00000254941 IFIT3O14879 490 aaKnown RBP11.12□□□□□ -0.63
NIP7-202ENST00000254941 POLR3DP05423 398 aaPredicted RBP11.12□□□□□ -0.63
NIP7-202ENST00000254941 PLCD1P51178 756 aa11.12□□□□□ -0.63
NIP7-202ENST00000254941 RBM5P52756 815 aaKnown RBP eCLIP11.12□□□□□ -0.63
NIP7-202ENST00000254941 SCRN1Q12765 414 aa11.12□□□□□ -0.63
NIP7-202ENST00000254941 SART3Q15020 963 aaKnown RBP11.12□□□□□ -0.63
NIP7-202ENST00000254941 RAB3GAP1Q15042 981 aa11.12□□□□□ -0.63
NIP7-202ENST00000254941 TMEM67Q5HYA8 995 aa11.12□□□□□ -0.63
NIP7-202ENST00000254941 LY9Q9HBG7 655 aa11.12□□□□□ -0.63
NIP7-202ENST00000254941 SAP30BPQ9UHR5 308 aaKnown RBP11.12□□□□□ -0.63
NIP7-202ENST00000254941 BRPF3Q9ULD4 1205 aa11.12□□□□□ -0.63
NIP7-202ENST00000254941 SMC3Q9UQE7 1217 aa11.12□□□□□ -0.63
NIP7-202ENST00000254941 KLF18A0A0U1RQI7 1052 aa11.11□□□□□ -0.63
NIP7-202ENST00000254941 RANBP6O60518 1105 aaKnown RBP11.11□□□□□ -0.63
NIP7-202ENST00000254941 PRDM1O75626 825 aa11.11□□□□□ -0.63
NIP7-202ENST00000254941 SLC4A8Q2Y0W8 1093 aa11.11□□□□□ -0.63
NIP7-202ENST00000254941 CIAPIN1Q6FI81 312 aa11.11□□□□□ -0.63
NIP7-202ENST00000254941 TMTC2Q8N394 836 aa11.11□□□□□ -0.63
NIP7-202ENST00000254941 OGFOD1Q8N543 542 aa11.11□□□□□ -0.63
NIP7-202ENST00000254941 CHMP4CQ96CF2 233 aa11.11□□□□□ -0.63
NIP7-202ENST00000254941 IDI2Q9BXS1 227 aa11.11□□□□□ -0.63
NIP7-202ENST00000254941 DDX4Q9NQI0 724 aaKnown RBP11.11□□□□□ -0.63
NIP7-202ENST00000254941 PCDHAC2Q9Y5I4 1007 aa11.11□□□□□ -0.63
NIP7-202ENST00000254941 TCHHQ07283 1943 aa11.11□□□□□ -0.63
NIP7-202ENST00000254941 ERICH2A1L162 156 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 PRELPP51888 382 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 RASSF7Q02833 373 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 PICALMQ13492 652 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 PKP1Q13835 747 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 TNIP1Q15025 636 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 CFAP100Q494V2 611 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 C16orf86Q6ZW13 317 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 IQCA1Q86XH1 822 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 DYNLL2Q96FJ2 89 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 ZKSCAN3Q9BRR0 538 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 LLPHQ9BRT6 129 aaKnown RBP11.1□□□□□ -0.63
NIP7-202ENST00000254941 UBAC1Q9BSL1 405 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 SYT17Q9BSW7 474 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 ZNF287Q9HBT7 754 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 HDAC9Q9UKV0 1011 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 HPS5Q9UPZ3 1129 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 SIPA1L1O43166 1804 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 MYCNP04198 464 aaPredicted RBP11.1□□□□□ -0.63
NIP7-202ENST00000254941 GJB2P29033 226 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 MMP14P50281 582 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 NFIAQ12857 509 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 SEC23AQ15436 765 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 APOA5Q6Q788 366 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 TTC6Q86TZ1 520 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 PRMT6Q96LA8 375 aaPredicted RBP11.1□□□□□ -0.63
NIP7-202ENST00000254941 ZSCAN10Q96SZ4 725 aaPredicted RBP11.1□□□□□ -0.63
NIP7-202ENST00000254941 OSBPL5Q9H0X9 879 aaPredicted RBP11.1□□□□□ -0.63
NIP7-202ENST00000254941 SENP2Q9HC62 589 aa11.1□□□□□ -0.63
NIP7-202ENST00000254941 NAP1L2Q9ULW6 460 aaPredicted RBP11.1□□□□□ -0.63
NIP7-202ENST00000254941 MYH6P13533 1939 aa11.09□□□□□ -0.63
NIP7-202ENST00000254941 TNKSO95271 1327 aa11.09□□□□□ -0.63
NIP7-202ENST00000254941 SPDYE2BA6NHP3 402 aa11.09□□□□□ -0.63
NIP7-202ENST00000254941 GOLGA8BA8MQT2 603 aa11.09□□□□□ -0.63
NIP7-202ENST00000254941 FZD9O00144 591 aa11.09□□□□□ -0.63
NIP7-202ENST00000254941 SPDYE6P0CI01 402 aa11.09□□□□□ -0.63
NIP7-202ENST00000254941 CCT2P78371 535 aaKnown RBP11.09□□□□□ -0.63
NIP7-202ENST00000254941 WTAPQ15007 396 aa11.09□□□□□ -0.63
NIP7-202ENST00000254941 ENAHQ8N8S7 591 aaPredicted RBP11.09□□□□□ -0.63
NIP7-202ENST00000254941 MTMR14Q8NCE2 650 aa11.09□□□□□ -0.63
NIP7-202ENST00000254941 SMARCC2Q8TAQ2 1214 aa11.09□□□□□ -0.63
NIP7-202ENST00000254941 MKNK2Q9HBH9 465 aa11.09□□□□□ -0.63
NIP7-202ENST00000254941 NCOA5Q9HCD5 579 aaKnown RBP11.09□□□□□ -0.63
NIP7-202ENST00000254941 CCDC69A6NI79 296 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 TSPY2A6NKD2 308 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 DHX16O60231 1041 aaKnown RBP11.08□□□□□ -0.64
NIP7-202ENST00000254941 CTDNEP1O95476 244 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 BRD1O95696 1058 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 PDIA4P13667 645 aaKnown RBP11.08□□□□□ -0.64
NIP7-202ENST00000254941 RPS12P25398 132 aaKnown RBP11.08□□□□□ -0.64
NIP7-202ENST00000254941 CDK8P49336 464 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 RCAN1P53805 252 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 GABPAQ06546 454 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 NFXL1Q6ZNB6 911 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 SLC44A5Q8NCS7 719 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 NSUN7Q8NE18 718 aaKnown RBP11.08□□□□□ -0.64
NIP7-202ENST00000254941 TNPO1Q92973 898 aaKnown RBP11.08□□□□□ -0.64
NIP7-202ENST00000254941 DHX36Q9H2U1 1008 aaKnown RBP11.08□□□□□ -0.64
NIP7-202ENST00000254941 TDRD3Q9H7E2 651 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms