RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 VPS54Q9P1Q0 977 aa13.58□□□□□ -0.24
LIN28A-201ENST00000254231 ST3GAL1Q11201 340 aa13.58□□□□□ -0.24
LIN28A-201ENST00000254231 GPKOWQ92917 476 aaPredicted RBP eCLIP13.58□□□□□ -0.24
LIN28A-201ENST00000254231 CLIP2Q9UDT6 1046 aa13.58□□□□□ -0.24
LIN28A-201ENST00000254231 DAGLAQ9Y4D2 1042 aa13.58□□□□□ -0.24
LIN28A-201ENST00000254231 GUCY1A2P33402 732 aa13.58□□□□□ -0.24
LIN28A-201ENST00000254231 DHX8Q14562 1220 aaKnown RBP13.58□□□□□ -0.24
LIN28A-201ENST00000254231 PDILTQ8N807 584 aa13.58□□□□□ -0.24
LIN28A-201ENST00000254231 PRMT6Q96LA8 375 aaPredicted RBP13.58□□□□□ -0.24
LIN28A-201ENST00000254231 ZSCAN31Q96LW9 406 aaPredicted RBP13.58□□□□□ -0.24
LIN28A-201ENST00000254231 CRAMP1Q96RY5 1269 aa13.58□□□□□ -0.24
LIN28A-201ENST00000254231 PDE4DIPQ5VU43 2346 aa13.58□□□□□ -0.24
LIN28A-201ENST00000254231 WDR33Q9C0J8 1336 aaKnown RBP13.58□□□□□ -0.24
LIN28A-201ENST00000254231 PSMD14O00487 310 aa13.57□□□□□ -0.24
LIN28A-201ENST00000254231 USP17L2Q6R6M4 530 aa13.57□□□□□ -0.24
LIN28A-201ENST00000254231 RASSF8Q8NHQ8 419 aa13.57□□□□□ -0.24
LIN28A-201ENST00000254231 KAT14Q9H8E8 782 aa13.57□□□□□ -0.24
LIN28A-201ENST00000254231 NRAPQ86VF7 1730 aa13.57□□□□□ -0.24
LIN28A-201ENST00000254231 ZSCAN22P10073 491 aaPredicted RBP13.57□□□□□ -0.24
LIN28A-201ENST00000254231 RTN1Q16799 776 aa13.57□□□□□ -0.24
LIN28A-201ENST00000254231 CRY2Q49AN0 593 aa13.57□□□□□ -0.24
LIN28A-201ENST00000254231 RIOK1Q9BRS2 568 aaKnown RBP13.57□□□□□ -0.24
LIN28A-201ENST00000254231 FHDC1Q9C0D6 1143 aaPredicted RBP13.57□□□□□ -0.24
LIN28A-201ENST00000254231 LAMA3Q16787 3333 aa13.57□□□□□ -0.24
LIN28A-201ENST00000254231 PLEKHA8P1O95397 391 aa13.56□□□□□ -0.24
LIN28A-201ENST00000254231 CRKP46108 304 aa13.56□□□□□ -0.24
LIN28A-201ENST00000254231 RASGRP4Q8TDF6 673 aa13.56□□□□□ -0.24
LIN28A-201ENST00000254231 HMGB1P09429 215 aaKnown RBP13.56□□□□□ -0.24
LIN28A-201ENST00000254231 CATIPQ7Z7H3 387 aa13.56□□□□□ -0.24
LIN28A-201ENST00000254231 CWC22Q9HCG8 908 aaKnown RBP13.56□□□□□ -0.24
LIN28A-201ENST00000254231 DDX4Q9NQI0 724 aaKnown RBP13.56□□□□□ -0.24
LIN28A-201ENST00000254231 SH2B1Q9NRF2 756 aaPredicted RBP13.56□□□□□ -0.24
LIN28A-201ENST00000254231 EGFRP00533 1210 aa13.56□□□□□ -0.24
LIN28A-201ENST00000254231 DLGAP5Q15398 846 aa13.56□□□□□ -0.24
LIN28A-201ENST00000254231 CFAP100Q494V2 611 aa13.56□□□□□ -0.24
LIN28A-201ENST00000254231 APOA5Q6Q788 366 aa13.56□□□□□ -0.24
LIN28A-201ENST00000254231 GTF3C6Q969F1 213 aa13.56□□□□□ -0.24
LIN28A-201ENST00000254231 SPATA32Q96LK8 384 aa13.56□□□□□ -0.24
LIN28A-201ENST00000254231 PLIN2Q99541 437 aa13.56□□□□□ -0.24
LIN28A-201ENST00000254231 VEGFAP15692 232 aaPredicted RBP13.55□□□□□ -0.24
LIN28A-201ENST00000254231 NBPF9Q3BBW0 867 aa13.55□□□□□ -0.24
LIN28A-201ENST00000254231 HSP90AA4PQ58FG1 418 aa13.55□□□□□ -0.24
LIN28A-201ENST00000254231 WDR78Q5VTH9 848 aa13.55□□□□□ -0.24
LIN28A-201ENST00000254231 CTCFLQ8NI51 663 aaPredicted RBP13.55□□□□□ -0.24
LIN28A-201ENST00000254231 NUP88Q99567 741 aaPredicted RBP13.55□□□□□ -0.24
LIN28A-201ENST00000254231 RNF41Q9H4P4 317 aaPredicted RBP13.55□□□□□ -0.24
LIN28A-201ENST00000254231 TMOD2Q9NZR1 351 aa13.55□□□□□ -0.24
LIN28A-201ENST00000254231 ASTN2O75129 1339 aaPredicted RBP13.55□□□□□ -0.24
LIN28A-201ENST00000254231 SORBS3O60504 671 aa13.55□□□□□ -0.24
LIN28A-201ENST00000254231 CCDC93Q567U6 631 aa13.55□□□□□ -0.24
LIN28A-201ENST00000254231 HEATR3Q7Z4Q2 680 aa13.55□□□□□ -0.24
LIN28A-201ENST00000254231 UPF1Q92900 1129 aaKnown RBP eCLIP13.55□□□□□ -0.24
LIN28A-201ENST00000254231 PGBD1Q96JS3 809 aa13.55□□□□□ -0.24
LIN28A-201ENST00000254231 F13A1P00488 732 aa13.55□□□□□ -0.24
LIN28A-201ENST00000254231 GSTO1P78417 241 aa13.55□□□□□ -0.24
LIN28A-201ENST00000254231 TRIM22Q8IYM9 498 aa13.55□□□□□ -0.24
LIN28A-201ENST00000254231 ZNF654Q8IZM8 581 aa13.55□□□□□ -0.24
LIN28A-201ENST00000254231 KRT23Q9C075 422 aa13.55□□□□□ -0.24
LIN28A-201ENST00000254231 COA1Q9GZY4 146 aa13.55□□□□□ -0.24
LIN28A-201ENST00000254231 CHMP4BP1P59074 171 aa13.54□□□□□ -0.24
LIN28A-201ENST00000254231 KCTD1Q719H9 257 aa13.54□□□□□ -0.24
LIN28A-201ENST00000254231 CSRNP1Q96S65 589 aa13.54□□□□□ -0.24
LIN28A-201ENST00000254231 TAOK3Q9H2K8 898 aa13.54□□□□□ -0.24
LIN28A-201ENST00000254231 BRWD3Q6RI45 1802 aa13.54□□□□□ -0.24
LIN28A-201ENST00000254231 NR5A1Q13285 461 aa13.54□□□□□ -0.24
LIN28A-201ENST00000254231 DGKZQ13574 1117 aa13.54□□□□□ -0.24
LIN28A-201ENST00000254231 STAG2Q8N3U4 1231 aa13.54□□□□□ -0.24
LIN28A-201ENST00000254231 ENAHQ8N8S7 591 aaPredicted RBP13.54□□□□□ -0.24
LIN28A-201ENST00000254231 HOMER2Q9NSB8 354 aa13.54□□□□□ -0.24
LIN28A-201ENST00000254231 COL1A1P02452 1464 aaPredicted RBP13.54□□□□□ -0.24
LIN28A-201ENST00000254231 DDX11L8A8MPP1 907 aa13.54□□□□□ -0.24
LIN28A-201ENST00000254231 GNAT2P19087 354 aa13.54□□□□□ -0.24
LIN28A-201ENST00000254231 SSRP1Q08945 709 aaKnown RBP13.54□□□□□ -0.24
LIN28A-201ENST00000254231 STK38Q15208 465 aa13.54□□□□□ -0.24
LIN28A-201ENST00000254231 GIMAP6Q6P9H5 292 aa13.54□□□□□ -0.24
LIN28A-201ENST00000254231 PAXIP1Q6ZW49 1069 aaPredicted RBP13.54□□□□□ -0.24
LIN28A-201ENST00000254231 MB21D2Q8IYB1 491 aaPredicted RBP13.54□□□□□ -0.24
LIN28A-201ENST00000254231 TMEM39BQ9GZU3 492 aa13.54□□□□□ -0.24
LIN28A-201ENST00000254231 MTMR6Q9Y217 621 aa13.54□□□□□ -0.24
LIN28A-201ENST00000254231 MRVI1Q9Y6F6 885 aa13.54□□□□□ -0.24
LIN28A-201ENST00000254231 CDC42EP5Q6NZY7 148 aa13.53□□□□□ -0.24
LIN28A-201ENST00000254231 NSUN7Q8NE18 718 aaKnown RBP13.53□□□□□ -0.24
LIN28A-201ENST00000254231 ZSCAN10Q96SZ4 725 aaPredicted RBP13.53□□□□□ -0.24
LIN28A-201ENST00000254231 YDJCA8MPS7 323 aa13.53□□□□□ -0.24
LIN28A-201ENST00000254231 BIN1O00499 593 aa13.53□□□□□ -0.24
LIN28A-201ENST00000254231 BTBD18B2RXH4 712 aa13.52□□□□□ -0.24
LIN28A-201ENST00000254231 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.52□□□□□ -0.24
LIN28A-201ENST00000254231 FEZ1Q99689 392 aa13.52□□□□□ -0.24
LIN28A-201ENST00000254231 TM6SF1Q9BZW5 370 aa13.52□□□□□ -0.24
LIN28A-201ENST00000254231 CTDNEP1O95476 244 aa13.52□□□□□ -0.25
LIN28A-201ENST00000254231 CDK8P49336 464 aa13.52□□□□□ -0.25
LIN28A-201ENST00000254231 USH1GQ495M9 461 aa13.52□□□□□ -0.25
LIN28A-201ENST00000254231 DDTLA6NHG4 134 aaPredicted RBP13.52□□□□□ -0.25
LIN28A-201ENST00000254231 MARCH6O60337 910 aa13.52□□□□□ -0.25
LIN28A-201ENST00000254231 HOXA10P31260 410 aaPredicted RBP13.52□□□□□ -0.25
LIN28A-201ENST00000254231 CPXCR1Q8N123 301 aa13.52□□□□□ -0.25
LIN28A-201ENST00000254231 PNMA1Q8ND90 353 aa13.52□□□□□ -0.25
LIN28A-201ENST00000254231 NWD2Q9ULI1 1742 aa13.52□□□□□ -0.25
LIN28A-201ENST00000254231 MROH7-TTC4A0A0A0MT08 1334 aa13.52□□□□□ -0.25
LIN28A-201ENST00000254231 AKR1B1P15121 316 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms