RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 CHPF2Q9P2E5 772 aa14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 CREB3O43889 395 aa14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 PIK3C2GO75747 1445 aa14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 EEF2P13639 858 aaKnown RBP14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 STX2P32856 288 aa14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 IFT88Q13099 833 aa14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 LRRC2Q9BYS8 371 aa14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 SYNCQ9H7C4 482 aa14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 PABPN1LA6NDY0 278 aaKnown RBP14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 SNRPA1P09661 255 aaKnown RBP14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 IFIT5Q13325 482 aaKnown RBP14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 NUP58Q9BVL2 599 aa14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 MBD5Q9P267 1494 aa14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 PIK3R4Q99570 1358 aa14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 CTNNA1P35221 906 aaKnown RBP14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 CCT6AP40227 531 aaKnown RBP14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 MFSD6Q6ZSS7 791 aa14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 ZNF444Q8N0Y2 327 aaPredicted RBP14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 ACTR5Q9H9F9 607 aaPredicted RBP14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 CFAP65Q6ZU64 1925 aaKnown RBP14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 ARL1P40616 181 aaPredicted RBP14.65□□□□□ -0.06
PCDHGA3-201ENST00000253812 ZNF652Q9Y2D9 606 aa14.65□□□□□ -0.06
PCDHGA3-201ENST00000253812 PSDA5PKW4 1024 aaPredicted RBP14.65□□□□□ -0.06
PCDHGA3-201ENST00000253812 TMEM110-MUSTN1A8MSY1 372 aa14.65□□□□□ -0.06
PCDHGA3-201ENST00000253812 DENND2CQ68D51 928 aa14.65□□□□□ -0.06
PCDHGA3-201ENST00000253812 NCAPGQ9BPX3 1015 aa14.65□□□□□ -0.06
PCDHGA3-201ENST00000253812 SSX2IPQ9Y2D8 614 aa14.65□□□□□ -0.06
PCDHGA3-201ENST00000253812 EVI5O60447 810 aa14.65□□□□□ -0.06
PCDHGA3-201ENST00000253812 SLC9C1Q4G0N8 1177 aa14.65□□□□□ -0.06
PCDHGA3-201ENST00000253812 FAM169AQ9Y6X4 670 aa14.65□□□□□ -0.06
PCDHGA3-201ENST00000253812 PTPDC1A2A3K4 754 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 GUCY2CP25092 1073 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 ERCC5P28715 1186 aaPredicted RBP14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 MAGEA1P43355 309 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 LRMPQ12912 555 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 TADA2BQ86TJ2 420 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 ERMNQ8TAM6 284 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 TCP11Q8WWU5 503 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 SPECC1L-ADORA2AF8WAN1 911 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 I3L4J1 428 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 MCM7P33993 719 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 SF3A3Q12874 501 aaKnown RBP eCLIP14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 LONRF2Q1L5Z9 754 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 ARMC9Q7Z3E5 817 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 ARMC2Q8NEN0 867 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 FBXO18Q8NFZ0 1043 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 ZCRB1Q8TBF4 217 aaKnown RBP14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 FBXO41Q8TF61 875 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 CUL5Q93034 780 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 CCDC51Q96ER9 411 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 ZPR1O75312 459 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 RNF8O76064 485 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 CCDC14Q49A88 953 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 GAS2L3Q86XJ1 694 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 MRPL50Q8N5N7 158 aaKnown RBP14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 LEO1Q8WVC0 666 aaPredicted RBP14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 VPS16Q9H269 839 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 SLC24A3Q9HC58 644 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 BAG2O95816 211 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 SKIP12755 728 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 SESN3P58005 492 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 WTAPQ15007 396 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 ANKRD13DQ6ZTN6 518 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 TRIM31Q9BZY9 425 aa14.64□□□□□ -0.07
PCDHGA3-201ENST00000253812 CCDC151A5D8V7 595 aa14.63□□□□□ -0.07
PCDHGA3-201ENST00000253812 RTN1Q16799 776 aa14.63□□□□□ -0.07
PCDHGA3-201ENST00000253812 AKAP4Q5JQC9 854 aa14.63□□□□□ -0.07
PCDHGA3-201ENST00000253812 KLHL7Q8IXQ5 586 aa14.63□□□□□ -0.07
PCDHGA3-201ENST00000253812 CCDC197Q8NCU1 140 aa14.63□□□□□ -0.07
PCDHGA3-201ENST00000253812 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.63□□□□□ -0.07
PCDHGA3-201ENST00000253812 VAMP4O75379 141 aa14.63□□□□□ -0.07
PCDHGA3-201ENST00000253812 NLRP12P59046 1061 aa14.63□□□□□ -0.07
PCDHGA3-201ENST00000253812 RNASE9P60153 205 aaKnown RBP14.63□□□□□ -0.07
PCDHGA3-201ENST00000253812 UAP1Q16222 522 aaPredicted RBP14.63□□□□□ -0.07
PCDHGA3-201ENST00000253812 ZC4H2Q9NQZ6 224 aa14.63□□□□□ -0.07
PCDHGA3-201ENST00000253812 GJC1P36383 396 aa14.63□□□□□ -0.07
PCDHGA3-201ENST00000253812 LRRC8AQ8IWT6 810 aa14.63□□□□□ -0.07
PCDHGA3-201ENST00000253812 CFAP61Q8NHU2 1237 aa14.63□□□□□ -0.07
PCDHGA3-201ENST00000253812 SH3GL3Q99963 347 aa14.63□□□□□ -0.07
PCDHGA3-201ENST00000253812 YY1AP1Q9H869 796 aa14.63□□□□□ -0.07
PCDHGA3-201ENST00000253812 NFE2L3Q9Y4A8 694 aa14.63□□□□□ -0.07
PCDHGA3-201ENST00000253812 SUN1O94901 812 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 MTX1Q13505 466 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 TAF11Q15544 211 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 XPO4Q9C0E2 1151 aaKnown RBP14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 RAB17Q9H0T7 212 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 DCTPP1Q9H773 170 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 KRT15P19012 456 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 CXorf38Q8TB03 319 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 PSMD1Q99460 953 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 NOC4LQ9BVI4 516 aaKnown RBP14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 PARP2Q9UGN5 583 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 SCINQ9Y6U3 715 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 GAS8O95995 478 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 TMED1Q13445 227 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 COPS6Q7L5N1 327 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 XAGE3Q8WTP9 111 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 HAUS1Q96CS2 278 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 SLF1Q9BQI6 1058 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms