RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 IRX6P78412 446 aaPredicted RBP30.32■■■□□ 2.44
LSM7-201ENST00000252622 CFHR5Q9BXR6 569 aa30.32■■■□□ 2.44
LSM7-201ENST00000252622 CRNKL1Q9BZJ0 848 aaKnown RBP30.32■■■□□ 2.44
LSM7-201ENST00000252622 METTL16Q86W50 562 aaKnown RBP30.31■■■□□ 2.44
LSM7-201ENST00000252622 PALD1Q9ULE6 856 aa30.31■■■□□ 2.44
LSM7-201ENST00000252622 FAM196BA6NMK8 535 aa30.3■■■□□ 2.44
LSM7-201ENST00000252622 IGF2BP3O00425 579 aaKnown RBP eCLIP30.3■■■□□ 2.44
LSM7-201ENST00000252622 IRF6O14896 467 aa30.3■■■□□ 2.44
LSM7-201ENST00000252622 HLA-DOAP06340 250 aa30.3■■■□□ 2.44
LSM7-201ENST00000252622 LCORLQ8N3X6 602 aa30.3■■■□□ 2.44
LSM7-201ENST00000252622 STAP2Q9UGK3 403 aa30.3■■■□□ 2.44
LSM7-201ENST00000252622 DDX60LQ5H9U9 1706 aaKnown RBP30.3■■■□□ 2.44
LSM7-201ENST00000252622 DOCK1Q14185 1865 aa30.29■■■□□ 2.44
LSM7-201ENST00000252622 SNAPC2Q13487 334 aa30.29■■■□□ 2.44
LSM7-201ENST00000252622 SLFNL1Q499Z3 407 aa30.29■■■□□ 2.44
LSM7-201ENST00000252622 OTUD7BQ6GQQ9 843 aa30.29■■■□□ 2.44
LSM7-201ENST00000252622 FOXP4Q8IVH2 680 aaPredicted RBP30.29■■■□□ 2.44
LSM7-201ENST00000252622 BRI3BPQ8WY22 251 aa30.29■■■□□ 2.44
LSM7-201ENST00000252622 PICK1Q9NRD5 415 aa30.29■■■□□ 2.44
LSM7-201ENST00000252622 SAP30BPQ9UHR5 308 aaKnown RBP30.29■■■□□ 2.44
LSM7-201ENST00000252622 CCL15-CCL14A0A0B4J2E2 113 aa30.28■■■□□ 2.44
LSM7-201ENST00000252622 MBD4O95243 580 aa30.28■■■□□ 2.44
LSM7-201ENST00000252622 CCL15Q16663 113 aa30.28■■■□□ 2.44
LSM7-201ENST00000252622 PTPN18Q99952 460 aa30.28■■■□□ 2.44
LSM7-201ENST00000252622 KCNH4Q9UQ05 1017 aa30.28■■■□□ 2.44
LSM7-201ENST00000252622 CHGBP05060 677 aa30.27■■■□□ 2.44
LSM7-201ENST00000252622 CETPP11597 493 aa30.27■■■□□ 2.44
LSM7-201ENST00000252622 LNPKQ9C0E8 428 aa30.27■■■□□ 2.44
LSM7-201ENST00000252622 ARMT1Q9H993 441 aa30.27■■■□□ 2.44
LSM7-201ENST00000252622 MYH1P12882 1939 aa30.27■■■□□ 2.44
LSM7-201ENST00000252622 NAV1Q8NEY1 1877 aa30.27■■■□□ 2.44
LSM7-201ENST00000252622 PTPRAP18433 802 aa30.26■■■□□ 2.43
LSM7-201ENST00000252622 NUCB1Q02818 461 aa30.26■■■□□ 2.43
LSM7-201ENST00000252622 NOM1Q5C9Z4 860 aaKnown RBP30.26■■■□□ 2.43
LSM7-201ENST00000252622 CRACR2BQ8N4Y2 399 aaPredicted RBP30.26■■■□□ 2.43
LSM7-201ENST00000252622 EHD4Q9H223 541 aa30.26■■■□□ 2.43
LSM7-201ENST00000252622 DNAJC18Q9H819 358 aa30.26■■■□□ 2.43
LSM7-201ENST00000252622 TBC1D8O95759 1140 aa30.25■■■□□ 2.43
LSM7-201ENST00000252622 ZFYP08048 801 aaPredicted RBP30.25■■■□□ 2.43
LSM7-201ENST00000252622 PDE1AP54750 535 aa30.25■■■□□ 2.43
LSM7-201ENST00000252622 LRRFIP1Q32MZ4 808 aaKnown RBP30.25■■■□□ 2.43
LSM7-201ENST00000252622 B4GALNT3Q6L9W6 998 aa30.25■■■□□ 2.43
LSM7-201ENST00000252622 TTC6Q86TZ1 520 aa30.25■■■□□ 2.43
LSM7-201ENST00000252622 CHD1LQ86WJ1 897 aa30.25■■■□□ 2.43
LSM7-201ENST00000252622 TRIM34Q9BYJ4 488 aa30.25■■■□□ 2.43
LSM7-201ENST00000252622 CXCL11O14625 94 aa30.23■■■□□ 2.43
LSM7-201ENST00000252622 RNF113AO15541 343 aaKnown RBP30.23■■■□□ 2.43
LSM7-201ENST00000252622 CAP2P40123 477 aa30.23■■■□□ 2.43
LSM7-201ENST00000252622 SDR42E1Q8WUS8 393 aa30.23■■■□□ 2.43
LSM7-201ENST00000252622 APPBP2Q92624 585 aa30.23■■■□□ 2.43
LSM7-201ENST00000252622 PUS7LQ9H0K6 701 aaKnown RBP30.23■■■□□ 2.43
LSM7-201ENST00000252622 DCP1AQ9NPI6 582 aaPredicted RBP30.23■■■□□ 2.43
LSM7-201ENST00000252622 ZHX2Q9Y6X8 837 aa30.23■■■□□ 2.43
LSM7-201ENST00000252622 RRP1BQ14684 758 aaKnown RBP30.22■■■□□ 2.43
LSM7-201ENST00000252622 SLC4A8Q2Y0W8 1093 aa30.22■■■□□ 2.43
LSM7-201ENST00000252622 TNS4Q8IZW8 715 aa30.22■■■□□ 2.43
LSM7-201ENST00000252622 ZCCHC17Q9NP64 241 aaKnown RBP30.22■■■□□ 2.43
LSM7-201ENST00000252622 ATP8A2Q9NTI2 1148 aa30.22■■■□□ 2.43
LSM7-201ENST00000252622 SERPINB13Q9UIV8 391 aa30.22■■■□□ 2.43
LSM7-201ENST00000252622 MCM9Q9NXL9 1143 aa30.21■■■□□ 2.43
LSM7-201ENST00000252622 AFG3L2Q9Y4W6 797 aa30.21■■■□□ 2.43
LSM7-201ENST00000252622 POLR3DP05423 398 aaPredicted RBP30.2■■■□□ 2.43
LSM7-201ENST00000252622 FAM43AQ8N2R8 423 aa30.2■■■□□ 2.43
LSM7-201ENST00000252622 FSD1Q9BTV5 496 aa30.2■■■□□ 2.43
LSM7-201ENST00000252622 TBC1D2Q9BYX2 928 aa30.2■■■□□ 2.43
LSM7-201ENST00000252622 GINM1Q9NU53 330 aa30.2■■■□□ 2.43
LSM7-201ENST00000252622 PHIPQ8WWQ0 1821 aa30.19■■■□□ 2.42
LSM7-201ENST00000252622 ATAD5Q96QE3 1844 aa30.19■■■□□ 2.42
LSM7-201ENST00000252622 GPR25O00155 361 aa30.19■■■□□ 2.42
LSM7-201ENST00000252622 PRKAB2O43741 272 aa30.19■■■□□ 2.42
LSM7-201ENST00000252622 R3HDMLQ9H3Y0 253 aa30.19■■■□□ 2.42
LSM7-201ENST00000252622 CASP8AP2Q9UKL3 1982 aa30.19■■■□□ 2.42
LSM7-201ENST00000252622 BTBD19C9JJ37 291 aa30.18■■■□□ 2.42
LSM7-201ENST00000252622 CRHR2Q13324 411 aa30.18■■■□□ 2.42
LSM7-201ENST00000252622 MOGSQ13724 837 aa30.18■■■□□ 2.42
LSM7-201ENST00000252622 OSBP2Q969R2 916 aa30.18■■■□□ 2.42
LSM7-201ENST00000252622 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.18■■■□□ 2.42
LSM7-201ENST00000252622 SLC4A4Q9Y6R1 1079 aa30.18■■■□□ 2.42
LSM7-201ENST00000252622 A0A0G2JLL6 359 aaPredicted RBP30.17■■■□□ 2.42
LSM7-201ENST00000252622 ASNSP08243 561 aa30.17■■■□□ 2.42
LSM7-201ENST00000252622 PLCD1P51178 756 aa30.17■■■□□ 2.42
LSM7-201ENST00000252622 TATDN1Q6P1N9 297 aa30.17■■■□□ 2.42
LSM7-201ENST00000252622 PRRT2Q7Z6L0 340 aaPredicted RBP30.17■■■□□ 2.42
LSM7-201ENST00000252622 ANKRD23Q86SG2 305 aa30.17■■■□□ 2.42
LSM7-201ENST00000252622 EVI5LQ96CN4 794 aa30.17■■■□□ 2.42
LSM7-201ENST00000252622 STRBPQ96SI9 672 aaKnown RBP30.17■■■□□ 2.42
LSM7-201ENST00000252622 TAOK2Q9UL54 1235 aa30.17■■■□□ 2.42
LSM7-201ENST00000252622 TAF1CQ15572 869 aaPredicted RBP30.16■■■□□ 2.42
LSM7-201ENST00000252622 CCDC84Q86UT8 332 aaPredicted RBP30.16■■■□□ 2.42
LSM7-201ENST00000252622 ZNF296Q8WUU4 475 aaPredicted RBP30.16■■■□□ 2.42
LSM7-201ENST00000252622 DDRGK1Q96HY6 314 aa30.16■■■□□ 2.42
LSM7-201ENST00000252622 OSBPL3Q9H4L5 887 aa30.16■■■□□ 2.42
LSM7-201ENST00000252622 USP17L5A8MUK1 530 aa30.15■■■□□ 2.42
LSM7-201ENST00000252622 GABPAQ06546 454 aa30.15■■■□□ 2.42
LSM7-201ENST00000252622 PLEKHM2Q8IWE5 1019 aa30.15■■■□□ 2.42
LSM7-201ENST00000252622 ZFYVE28Q9HCC9 887 aa30.15■■■□□ 2.42
LSM7-201ENST00000252622 GDF11O95390 407 aa30.14■■■□□ 2.42
LSM7-201ENST00000252622 FASTKD5Q7L8L6 764 aaKnown RBP30.14■■■□□ 2.42
LSM7-201ENST00000252622 TICAM2Q86XR7 235 aa30.14■■■□□ 2.42
LSM7-201ENST00000252622 ZNF280CQ8ND82 737 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms