RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 TRPC5Q9UL62 973 aaPredicted RBP29.19■■■□□ 2.26
TMEM55B-201ENST00000250489 OFD1O75665 1012 aa29.18■■■□□ 2.26
TMEM55B-201ENST00000250489 GUCY1A2P33402 732 aa29.18■■■□□ 2.26
TMEM55B-201ENST00000250489 TMED8Q6PL24 325 aaPredicted RBP29.18■■■□□ 2.26
TMEM55B-201ENST00000250489 CRACR2BQ8N4Y2 399 aaPredicted RBP29.17■■■□□ 2.26
TMEM55B-201ENST00000250489 AATFQ9NY61 560 aaKnown RBP eCLIP29.17■■■□□ 2.26
TMEM55B-201ENST00000250489 NUP133Q8WUM0 1156 aa29.17■■■□□ 2.26
TMEM55B-201ENST00000250489 ZSCAN10Q96SZ4 725 aaPredicted RBP29.17■■■□□ 2.26
TMEM55B-201ENST00000250489 CRNKL1Q9BZJ0 848 aaKnown RBP29.17■■■□□ 2.26
TMEM55B-201ENST00000250489 USP17L12C9JPN9 530 aa29.16■■■□□ 2.26
TMEM55B-201ENST00000250489 USP17L21D6R901 530 aa29.16■■■□□ 2.26
TMEM55B-201ENST00000250489 ENAHQ8N8S7 591 aaPredicted RBP29.16■■■□□ 2.26
TMEM55B-201ENST00000250489 NAP1L5Q96NT1 182 aaPredicted RBP29.16■■■□□ 2.26
TMEM55B-201ENST00000250489 LEMD3Q9Y2U8 911 aa29.16■■■□□ 2.26
TMEM55B-201ENST00000250489 CCDC88AQ3V6T2 1871 aa29.16■■■□□ 2.26
TMEM55B-201ENST00000250489 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.15■■■□□ 2.26
TMEM55B-201ENST00000250489 DEXIO95424 95 aa29.15■■■□□ 2.26
TMEM55B-201ENST00000250489 CMA1P23946 247 aa29.15■■■□□ 2.26
TMEM55B-201ENST00000250489 PTPAQ15257 358 aa29.15■■■□□ 2.26
TMEM55B-201ENST00000250489 C11orf57Q6ZUT1 292 aaPredicted RBP29.15■■■□□ 2.26
TMEM55B-201ENST00000250489 SLC51AQ86UW1 340 aa29.15■■■□□ 2.26
TMEM55B-201ENST00000250489 MAP3K14Q99558 947 aa29.15■■■□□ 2.26
TMEM55B-201ENST00000250489 LAMB1P07942 1786 aa29.15■■■□□ 2.26
TMEM55B-201ENST00000250489 UBR3Q6ZT12 1888 aa29.15■■■□□ 2.26
TMEM55B-201ENST00000250489 MYH2Q9UKX2 1941 aa29.15■■■□□ 2.26
TMEM55B-201ENST00000250489 PPP6R2O75170 966 aa29.15■■■□□ 2.26
TMEM55B-201ENST00000250489 WDHD1O75717 1129 aaPredicted RBP29.15■■■□□ 2.26
TMEM55B-201ENST00000250489 MMP1P03956 469 aa29.15■■■□□ 2.26
TMEM55B-201ENST00000250489 IQCB1Q15051 598 aa29.15■■■□□ 2.26
TMEM55B-201ENST00000250489 DCP1AQ9NPI6 582 aaPredicted RBP29.15■■■□□ 2.26
TMEM55B-201ENST00000250489 ANKIB1Q9P2G1 1089 aa29.15■■■□□ 2.26
TMEM55B-201ENST00000250489 PPP2R5BQ15173 497 aa29.14■■■□□ 2.26
TMEM55B-201ENST00000250489 PRR5LQ6MZQ0 368 aa29.14■■■□□ 2.26
TMEM55B-201ENST00000250489 ZNF830Q96NB3 372 aaPredicted RBP29.14■■■□□ 2.26
TMEM55B-201ENST00000250489 ATP8A2Q9NTI2 1148 aa29.14■■■□□ 2.26
TMEM55B-201ENST00000250489 JAG2Q9Y219 1238 aa29.14■■■□□ 2.26
TMEM55B-201ENST00000250489 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.14■■■□□ 2.26
TMEM55B-201ENST00000250489 DLEC1Q9Y238 1755 aa29.14■■■□□ 2.26
TMEM55B-201ENST00000250489 KIAA1551Q9HCM1 1747 aa29.14■■■□□ 2.25
TMEM55B-201ENST00000250489 PRDM1O75626 825 aa29.13■■■□□ 2.25
TMEM55B-201ENST00000250489 MARCKSP29966 332 aaPredicted RBP29.13■■■□□ 2.25
TMEM55B-201ENST00000250489 HSPA1LP34931 641 aa29.13■■■□□ 2.25
TMEM55B-201ENST00000250489 SPTY2D1Q68D10 685 aaPredicted RBP29.13■■■□□ 2.25
TMEM55B-201ENST00000250489 CMTR1Q8N1G2 835 aaKnown RBP29.13■■■□□ 2.25
TMEM55B-201ENST00000250489 SDF4Q9BRK5 362 aa29.13■■■□□ 2.25
TMEM55B-201ENST00000250489 MROH7-TTC4A0A0A0MT08 1334 aa29.13■■■□□ 2.25
TMEM55B-201ENST00000250489 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.13■■■□□ 2.25
TMEM55B-201ENST00000250489 ANO10Q9NW15 660 aa29.13■■■□□ 2.25
TMEM55B-201ENST00000250489 XDHP47989 1333 aa29.12■■■□□ 2.25
TMEM55B-201ENST00000250489 NOSTRINQ8IVI9 506 aa29.12■■■□□ 2.25
TMEM55B-201ENST00000250489 CCDC82Q8N4S0 544 aa29.12■■■□□ 2.25
TMEM55B-201ENST00000250489 JMYQ8N9B5 988 aa29.12■■■□□ 2.25
TMEM55B-201ENST00000250489 TTC12Q9H892 705 aaPredicted RBP29.12■■■□□ 2.25
TMEM55B-201ENST00000250489 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.12■■■□□ 2.25
TMEM55B-201ENST00000250489 ORC4O43929 436 aa29.12■■■□□ 2.25
TMEM55B-201ENST00000250489 PFKFB1P16118 471 aa29.12■■■□□ 2.25
TMEM55B-201ENST00000250489 KIAA2012Q0VF49 1180 aa29.12■■■□□ 2.25
TMEM55B-201ENST00000250489 SAFBQ15424 915 aaKnown RBP eCLIP29.12■■■□□ 2.25
TMEM55B-201ENST00000250489 IFIT1BQ5T764 474 aaKnown RBP29.12■■■□□ 2.25
TMEM55B-201ENST00000250489 IQCA1Q86XH1 822 aa29.12■■■□□ 2.25
TMEM55B-201ENST00000250489 KCNJ14Q9UNX9 436 aa29.12■■■□□ 2.25
TMEM55B-201ENST00000250489 EVX2Q03828 476 aa29.11■■■□□ 2.25
TMEM55B-201ENST00000250489 DZIP1Q86YF9 867 aaKnown RBP29.11■■■□□ 2.25
TMEM55B-201ENST00000250489 DIS3L2Q8IYB7 885 aaKnown RBP29.11■■■□□ 2.25
TMEM55B-201ENST00000250489 RNF26Q9BY78 433 aaPredicted RBP29.11■■■□□ 2.25
TMEM55B-201ENST00000250489 BTBD18B2RXH4 712 aa29.1■■■□□ 2.25
TMEM55B-201ENST00000250489 ZNF202O95125 648 aa29.1■■■□□ 2.25
TMEM55B-201ENST00000250489 GYS1P13807 737 aa29.1■■■□□ 2.25
TMEM55B-201ENST00000250489 SBK1Q52WX2 424 aa29.1■■■□□ 2.25
TMEM55B-201ENST00000250489 PLA2G4DQ86XP0 818 aa29.1■■■□□ 2.25
TMEM55B-201ENST00000250489 CERKQ8TCT0 537 aa29.1■■■□□ 2.25
TMEM55B-201ENST00000250489 ERCC4Q92889 916 aaPredicted RBP29.1■■■□□ 2.25
TMEM55B-201ENST00000250489 ARPP21Q9UBL0 812 aaPredicted RBP29.1■■■□□ 2.25
TMEM55B-201ENST00000250489 IGSF3O75054 1194 aa29.1■■■□□ 2.25
TMEM55B-201ENST00000250489 ZNF75DP51815 510 aa29.1■■■□□ 2.25
TMEM55B-201ENST00000250489 CATIPQ7Z7H3 387 aa29.1■■■□□ 2.25
TMEM55B-201ENST00000250489 WDR66Q8TBY9 1149 aa29.1■■■□□ 2.25
TMEM55B-201ENST00000250489 FOXP1Q9H334 677 aaPredicted RBP29.1■■■□□ 2.25
TMEM55B-201ENST00000250489 GOLGA6L6A8MZA4 724 aa29.09■■■□□ 2.25
TMEM55B-201ENST00000250489 TPM3P06753 285 aa29.09■■■□□ 2.25
TMEM55B-201ENST00000250489 SPC24Q8NBT2 197 aa29.09■■■□□ 2.25
TMEM55B-201ENST00000250489 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.09■■■□□ 2.25
TMEM55B-201ENST00000250489 KIAA1468Q9P260 1216 aa29.09■■■□□ 2.25
TMEM55B-201ENST00000250489 A0A087WWV3 80 aa29.08■■■□□ 2.25
TMEM55B-201ENST00000250489 CRY2Q49AN0 593 aa29.08■■■□□ 2.25
TMEM55B-201ENST00000250489 C15orf52Q6ZUT6 534 aaKnown RBP29.08■■■□□ 2.25
TMEM55B-201ENST00000250489 RPGRQ92834 1020 aaKnown RBP29.08■■■□□ 2.25
TMEM55B-201ENST00000250489 GOLGA6L19H0YKK7 550 aa29.08■■■□□ 2.25
TMEM55B-201ENST00000250489 CYP2D6P10635 497 aa29.08■■■□□ 2.25
TMEM55B-201ENST00000250489 SHC4Q6S5L8 630 aa29.08■■■□□ 2.25
TMEM55B-201ENST00000250489 TRIM5Q9C035 493 aa29.08■■■□□ 2.25
TMEM55B-201ENST00000250489 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.08■■■□□ 2.25
TMEM55B-201ENST00000250489 HPSEQ9Y251 543 aa29.08■■■□□ 2.25
TMEM55B-201ENST00000250489 FAM237AA0A1B0GTK4 181 aa29.07■■■□□ 2.24
TMEM55B-201ENST00000250489 FUT2Q10981 343 aa29.07■■■□□ 2.24
TMEM55B-201ENST00000250489 LDHBP07195 334 aaKnown RBP29.06■■■□□ 2.24
TMEM55B-201ENST00000250489 SLC3A2P08195 630 aaKnown RBP29.06■■■□□ 2.24
TMEM55B-201ENST00000250489 CALM1P0DP23 149 aa29.06■■■□□ 2.24
TMEM55B-201ENST00000250489 CALM2P0DP24 149 aa29.06■■■□□ 2.24
TMEM55B-201ENST00000250489 CALM3P0DP25 149 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms