RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 SNAPC2Q13487 334 aa15.45■□□□□ 0.06
VPREB3-201ENST00000248948 UBE3CQ15386 1083 aa15.45■□□□□ 0.06
VPREB3-201ENST00000248948 OTUD7BQ6GQQ9 843 aa15.45■□□□□ 0.06
VPREB3-201ENST00000248948 METTL16Q86W50 562 aaKnown RBP15.45■□□□□ 0.06
VPREB3-201ENST00000248948 SMC5Q8IY18 1101 aa15.45■□□□□ 0.06
VPREB3-201ENST00000248948 EXOC6Q8TAG9 804 aa15.45■□□□□ 0.06
VPREB3-201ENST00000248948 MS4A4AQ96JQ5 239 aa15.45■□□□□ 0.06
VPREB3-201ENST00000248948 RWDD1Q9H446 243 aaPredicted RBP15.45■□□□□ 0.06
VPREB3-201ENST00000248948 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.45■□□□□ 0.06
VPREB3-201ENST00000248948 PICK1Q9NRD5 415 aa15.45■□□□□ 0.06
VPREB3-201ENST00000248948 CCL15-CCL14A0A0B4J2E2 113 aa15.44■□□□□ 0.06
VPREB3-201ENST00000248948 IRF6O14896 467 aa15.44■□□□□ 0.06
VPREB3-201ENST00000248948 CETPP11597 493 aa15.44■□□□□ 0.06
VPREB3-201ENST00000248948 USP5P45974 858 aa15.44■□□□□ 0.06
VPREB3-201ENST00000248948 CCL15Q16663 113 aa15.44■□□□□ 0.06
VPREB3-201ENST00000248948 TNS4Q8IZW8 715 aa15.44■□□□□ 0.06
VPREB3-201ENST00000248948 KBTBD3Q8NAB2 608 aa15.44■□□□□ 0.06
VPREB3-201ENST00000248948 PI4K2BQ8TCG2 481 aa15.44■□□□□ 0.06
VPREB3-201ENST00000248948 CRNKL1Q9BZJ0 848 aaKnown RBP15.44■□□□□ 0.06
VPREB3-201ENST00000248948 EHD4Q9H223 541 aa15.44■□□□□ 0.06
VPREB3-201ENST00000248948 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.44■□□□□ 0.06
VPREB3-201ENST00000248948 KCNH4Q9UQ05 1017 aa15.44■□□□□ 0.06
VPREB3-201ENST00000248948 TSHZ3Q63HK5 1081 aa15.43■□□□□ 0.06
VPREB3-201ENST00000248948 BRI3BPQ8WY22 251 aa15.43■□□□□ 0.06
VPREB3-201ENST00000248948 TBC1D2Q9BYX2 928 aa15.43■□□□□ 0.06
VPREB3-201ENST00000248948 ZFYP08048 801 aaPredicted RBP15.42■□□□□ 0.06
VPREB3-201ENST00000248948 PTPRAP18433 802 aa15.42■□□□□ 0.06
VPREB3-201ENST00000248948 LRRFIP1Q32MZ4 808 aaKnown RBP15.42■□□□□ 0.06
VPREB3-201ENST00000248948 ANKRD45Q5TZF3 282 aa15.42■□□□□ 0.06
VPREB3-201ENST00000248948 FOXP4Q8IVH2 680 aaPredicted RBP15.42■□□□□ 0.06
VPREB3-201ENST00000248948 LCORLQ8N3X6 602 aa15.42■□□□□ 0.06
VPREB3-201ENST00000248948 PTPN18Q99952 460 aa15.42■□□□□ 0.06
VPREB3-201ENST00000248948 TRIM34Q9BYJ4 488 aa15.42■□□□□ 0.06
VPREB3-201ENST00000248948 TAOK2Q9UL54 1235 aa15.42■□□□□ 0.06
VPREB3-201ENST00000248948 PALD1Q9ULE6 856 aa15.42■□□□□ 0.06
VPREB3-201ENST00000248948 FAM196BA6NMK8 535 aa15.41■□□□□ 0.06
VPREB3-201ENST00000248948 CXCL11O14625 94 aa15.41■□□□□ 0.06
VPREB3-201ENST00000248948 TBC1D8O95759 1140 aa15.41■□□□□ 0.06
VPREB3-201ENST00000248948 TTC6Q86TZ1 520 aa15.41■□□□□ 0.06
VPREB3-201ENST00000248948 CRACR2BQ8N4Y2 399 aaPredicted RBP15.41■□□□□ 0.06
VPREB3-201ENST00000248948 OTUD7AQ8TE49 926 aaPredicted RBP15.41■□□□□ 0.06
VPREB3-201ENST00000248948 DNAJC18Q9H819 358 aa15.41■□□□□ 0.06
VPREB3-201ENST00000248948 GINM1Q9NU53 330 aa15.41■□□□□ 0.06
VPREB3-201ENST00000248948 STAP2Q9UGK3 403 aa15.41■□□□□ 0.06
VPREB3-201ENST00000248948 SAP30BPQ9UHR5 308 aaKnown RBP15.41■□□□□ 0.06
VPREB3-201ENST00000248948 MBD4O95243 580 aa15.4■□□□□ 0.06
VPREB3-201ENST00000248948 CAP2P40123 477 aa15.4■□□□□ 0.06
VPREB3-201ENST00000248948 APPBP2Q92624 585 aa15.4■□□□□ 0.06
VPREB3-201ENST00000248948 SERPINB13Q9UIV8 391 aa15.4■□□□□ 0.06
VPREB3-201ENST00000248948 GREB1LQ9C091 1923 aaPredicted RBP15.4■□□□□ 0.06
VPREB3-201ENST00000248948 MGAMO43451 1857 aa15.4■□□□□ 0.06
VPREB3-201ENST00000248948 A0A0G2JLL6 359 aaPredicted RBP15.39■□□□□ 0.05
VPREB3-201ENST00000248948 GPR25O00155 361 aa15.39■□□□□ 0.05
VPREB3-201ENST00000248948 ASNSP08243 561 aa15.39■□□□□ 0.05
VPREB3-201ENST00000248948 SLURP2P0DP57 97 aa15.39■□□□□ 0.05
VPREB3-201ENST00000248948 CRHR2Q13324 411 aa15.39■□□□□ 0.05
VPREB3-201ENST00000248948 PRRT2Q7Z6L0 340 aaPredicted RBP15.39■□□□□ 0.05
VPREB3-201ENST00000248948 ANKRD23Q86SG2 305 aa15.39■□□□□ 0.05
VPREB3-201ENST00000248948 FAM43AQ8N2R8 423 aa15.39■□□□□ 0.05
VPREB3-201ENST00000248948 ZNF296Q8WUU4 475 aaPredicted RBP15.39■□□□□ 0.05
VPREB3-201ENST00000248948 ARMT1Q9H993 441 aa15.39■□□□□ 0.05
VPREB3-201ENST00000248948 DCP1AQ9NPI6 582 aaPredicted RBP15.39■□□□□ 0.05
VPREB3-201ENST00000248948 ATP8A2Q9NTI2 1148 aa15.39■□□□□ 0.05
VPREB3-201ENST00000248948 AFG3L2Q9Y4W6 797 aa15.39■□□□□ 0.05
VPREB3-201ENST00000248948 PDE1AP54750 535 aa15.38■□□□□ 0.05
VPREB3-201ENST00000248948 TAF1CQ15572 869 aaPredicted RBP15.38■□□□□ 0.05
VPREB3-201ENST00000248948 TATDN1Q6P1N9 297 aa15.38■□□□□ 0.05
VPREB3-201ENST00000248948 SDR42E1Q8WUS8 393 aa15.38■□□□□ 0.05
VPREB3-201ENST00000248948 DDRGK1Q96HY6 314 aa15.38■□□□□ 0.05
VPREB3-201ENST00000248948 AS3MTQ9HBK9 375 aa15.38■□□□□ 0.05
VPREB3-201ENST00000248948 MCM9Q9NXL9 1143 aa15.38■□□□□ 0.05
VPREB3-201ENST00000248948 ZHX2Q9Y6X8 837 aa15.38■□□□□ 0.05
VPREB3-201ENST00000248948 BTBD19C9JJ37 291 aa15.37■□□□□ 0.05
VPREB3-201ENST00000248948 RNF113AO15541 343 aaKnown RBP15.37■□□□□ 0.05
VPREB3-201ENST00000248948 FKTNO75072 461 aa15.37■□□□□ 0.05
VPREB3-201ENST00000248948 IGHDP01880 384 aa15.37■□□□□ 0.05
VPREB3-201ENST00000248948 NUCB1Q02818 461 aa15.37■□□□□ 0.05
VPREB3-201ENST00000248948 MOGSQ13724 837 aa15.37■□□□□ 0.05
VPREB3-201ENST00000248948 FASTKD5Q7L8L6 764 aaKnown RBP15.37■□□□□ 0.05
VPREB3-201ENST00000248948 CHD1LQ86WJ1 897 aa15.37■□□□□ 0.05
VPREB3-201ENST00000248948 TICAM2Q86XR7 235 aa15.37■□□□□ 0.05
VPREB3-201ENST00000248948 FSD1Q9BTV5 496 aa15.37■□□□□ 0.05
VPREB3-201ENST00000248948 LNPKQ9C0E8 428 aa15.37■□□□□ 0.05
VPREB3-201ENST00000248948 PUS7LQ9H0K6 701 aaKnown RBP15.37■□□□□ 0.05
VPREB3-201ENST00000248948 ZFYVE28Q9HCC9 887 aa15.37■□□□□ 0.05
VPREB3-201ENST00000248948 ZBTB21Q9ULJ3 1066 aa15.37■□□□□ 0.05
VPREB3-201ENST00000248948 SLC45A1Q9Y2W3 748 aa15.37■□□□□ 0.05
VPREB3-201ENST00000248948 ZSWIM8A7E2V4 1837 aa15.37■□□□□ 0.05
VPREB3-201ENST00000248948 LAMA4Q16363 1823 aa15.37■□□□□ 0.05
VPREB3-201ENST00000248948 USP17L5A8MUK1 530 aa15.36■□□□□ 0.05
VPREB3-201ENST00000248948 CHGBP05060 677 aa15.36■□□□□ 0.05
VPREB3-201ENST00000248948 POLR3DP05423 398 aaPredicted RBP15.36■□□□□ 0.05
VPREB3-201ENST00000248948 GABPAQ06546 454 aa15.36■□□□□ 0.05
VPREB3-201ENST00000248948 RRP1BQ14684 758 aaKnown RBP15.36■□□□□ 0.05
VPREB3-201ENST00000248948 SLFNL1Q499Z3 407 aa15.36■□□□□ 0.05
VPREB3-201ENST00000248948 IFFO2Q5TF58 517 aa15.36■□□□□ 0.05
VPREB3-201ENST00000248948 CTU1Q7Z7A3 348 aaKnown RBP15.36■□□□□ 0.05
VPREB3-201ENST00000248948 AMOTL1Q8IY63 956 aa15.36■□□□□ 0.05
VPREB3-201ENST00000248948 ZNF280CQ8ND82 737 aa15.36■□□□□ 0.05
VPREB3-201ENST00000248948 PARK7Q99497 189 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms