RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 DAGLAQ9Y4D2 1042 aa27.32■■□□□ 1.96
SYNGR3-201ENST00000248121 USP17L12C9JPN9 530 aa27.32■■□□□ 1.96
SYNGR3-201ENST00000248121 USP17L21D6R901 530 aa27.32■■□□□ 1.96
SYNGR3-201ENST00000248121 GPR75-ASB3A0A0A6YYF3 556 aa27.31■■□□□ 1.96
SYNGR3-201ENST00000248121 PPP4CP60510 307 aa27.31■■□□□ 1.96
SYNGR3-201ENST00000248121 TMEM67Q5HYA8 995 aa27.31■■□□□ 1.96
SYNGR3-201ENST00000248121 DACT2Q5SW24 774 aa27.31■■□□□ 1.96
SYNGR3-201ENST00000248121 TMED8Q6PL24 325 aaPredicted RBP27.31■■□□□ 1.96
SYNGR3-201ENST00000248121 NLGN2Q8NFZ4 835 aa27.31■■□□□ 1.96
SYNGR3-201ENST00000248121 MKRN1Q9UHC7 482 aaKnown RBP27.31■■□□□ 1.96
SYNGR3-201ENST00000248121 KIF3AQ9Y496 699 aa27.31■■□□□ 1.96
SYNGR3-201ENST00000248121 MYH15Q9Y2K3 1946 aa27.31■■□□□ 1.96
SYNGR3-201ENST00000248121 LIFRP42702 1097 aa27.31■■□□□ 1.96
SYNGR3-201ENST00000248121 CSPP1Q1MSJ5 1256 aa27.31■■□□□ 1.96
SYNGR3-201ENST00000248121 ILDR2Q71H61 639 aa27.31■■□□□ 1.96
SYNGR3-201ENST00000248121 RTKN2Q8IZC4 609 aa27.31■■□□□ 1.96
SYNGR3-201ENST00000248121 PSMD1Q99460 953 aa27.31■■□□□ 1.96
SYNGR3-201ENST00000248121 PCDHAC2Q9Y5I4 1007 aa27.31■■□□□ 1.96
SYNGR3-201ENST00000248121 SYCE3A1L190 88 aa27.3■■□□□ 1.96
SYNGR3-201ENST00000248121 DHX16O60231 1041 aaKnown RBP27.3■■□□□ 1.96
SYNGR3-201ENST00000248121 USP17L8P0C7I0 530 aa27.3■■□□□ 1.96
SYNGR3-201ENST00000248121 RXRAP19793 462 aa27.3■■□□□ 1.96
SYNGR3-201ENST00000248121 RHBDL3P58872 404 aa27.3■■□□□ 1.96
SYNGR3-201ENST00000248121 RRP12Q5JTH9 1297 aaKnown RBP27.3■■□□□ 1.96
SYNGR3-201ENST00000248121 SUPT20HQ8NEM7 779 aa27.3■■□□□ 1.96
SYNGR3-201ENST00000248121 TFIP11Q9UBB9 837 aaKnown RBP27.3■■□□□ 1.96
SYNGR3-201ENST00000248121 ECM29Q5VYK3 1845 aa27.3■■□□□ 1.96
SYNGR3-201ENST00000248121 SRCAPQ6ZRS2 3230 aa27.3■■□□□ 1.96
SYNGR3-201ENST00000248121 LDHCP07864 332 aa27.29■■□□□ 1.96
SYNGR3-201ENST00000248121 DALRD3Q5D0E6 543 aaKnown RBP27.29■■□□□ 1.96
SYNGR3-201ENST00000248121 TGFBRAP1Q8WUH2 860 aa27.29■■□□□ 1.96
SYNGR3-201ENST00000248121 ZSCAN16Q9H4T2 348 aaPredicted RBP27.29■■□□□ 1.96
SYNGR3-201ENST00000248121 MYH1P12882 1939 aa27.29■■□□□ 1.96
SYNGR3-201ENST00000248121 IFIT3O14879 490 aaKnown RBP27.29■■□□□ 1.96
SYNGR3-201ENST00000248121 IGSF3O75054 1194 aa27.29■■□□□ 1.96
SYNGR3-201ENST00000248121 CDC27P30260 824 aa27.29■■□□□ 1.96
SYNGR3-201ENST00000248121 ADD1P35611 737 aaKnown RBP27.29■■□□□ 1.96
SYNGR3-201ENST00000248121 KIAA0825Q8IV33 1275 aa27.29■■□□□ 1.96
SYNGR3-201ENST00000248121 FAM163AQ96GL9 167 aaPredicted RBP27.29■■□□□ 1.96
SYNGR3-201ENST00000248121 ATP8A2Q9NTI2 1148 aa27.29■■□□□ 1.96
SYNGR3-201ENST00000248121 ELP1O95163 1332 aa27.29■■□□□ 1.96
SYNGR3-201ENST00000248121 BAG3O95817 575 aa27.28■■□□□ 1.96
SYNGR3-201ENST00000248121 METAP2P50579 478 aaKnown RBP eCLIP27.28■■□□□ 1.96
SYNGR3-201ENST00000248121 TPRNQ4KMQ1 711 aa27.28■■□□□ 1.96
SYNGR3-201ENST00000248121 STRIP1Q5VSL9 837 aa27.28■■□□□ 1.96
SYNGR3-201ENST00000248121 GIMAP6Q6P9H5 292 aa27.28■■□□□ 1.96
SYNGR3-201ENST00000248121 MAPKAPK5Q8IW41 473 aa27.28■■□□□ 1.96
SYNGR3-201ENST00000248121 RNF41Q9H4P4 317 aaPredicted RBP27.28■■□□□ 1.96
SYNGR3-201ENST00000248121 USP5P45974 858 aa27.28■■□□□ 1.96
SYNGR3-201ENST00000248121 GUCY1B3Q02153 619 aa27.28■■□□□ 1.96
SYNGR3-201ENST00000248121 ZKSCAN3Q9BRR0 538 aa27.28■■□□□ 1.96
SYNGR3-201ENST00000248121 TOMM22Q9NS69 142 aa27.28■■□□□ 1.96
SYNGR3-201ENST00000248121 FAM217BQ9NTX9 383 aaPredicted RBP27.28■■□□□ 1.96
SYNGR3-201ENST00000248121 CD2APQ9Y5K6 639 aa27.28■■□□□ 1.96
SYNGR3-201ENST00000248121 CPLX1O14810 134 aa27.27■■□□□ 1.96
SYNGR3-201ENST00000248121 PRDM1O75626 825 aa27.27■■□□□ 1.96
SYNGR3-201ENST00000248121 MICU3Q86XE3 530 aa27.27■■□□□ 1.96
SYNGR3-201ENST00000248121 MYL10Q9BUA6 226 aa27.27■■□□□ 1.96
SYNGR3-201ENST00000248121 MCM9Q9NXL9 1143 aa27.27■■□□□ 1.96
SYNGR3-201ENST00000248121 ORC3Q9UBD5 711 aaPredicted RBP27.27■■□□□ 1.96
SYNGR3-201ENST00000248121 SUGT1Q9Y2Z0 365 aa27.27■■□□□ 1.96
SYNGR3-201ENST00000248121 USP17L3A6NCW0 530 aa27.26■■□□□ 1.95
SYNGR3-201ENST00000248121 USP17L4A6NCW7 530 aa27.26■■□□□ 1.95
SYNGR3-201ENST00000248121 LRSAM1Q6UWE0 723 aa27.26■■□□□ 1.95
SYNGR3-201ENST00000248121 USP17L1Q7RTZ2 530 aa27.26■■□□□ 1.95
SYNGR3-201ENST00000248121 NOL10Q9BSC4 688 aaKnown RBP27.26■■□□□ 1.95
SYNGR3-201ENST00000248121 ZBTB43O43298 467 aa27.26■■□□□ 1.95
SYNGR3-201ENST00000248121 NFXL1Q6ZNB6 911 aa27.26■■□□□ 1.95
SYNGR3-201ENST00000248121 LARGE2Q8N3Y3 721 aa27.26■■□□□ 1.95
SYNGR3-201ENST00000248121 LEO1Q8WVC0 666 aaPredicted RBP27.26■■□□□ 1.95
SYNGR3-201ENST00000248121 SCAND2PQ9GZW5 306 aaPredicted RBP27.26■■□□□ 1.95
SYNGR3-201ENST00000248121 BCS1LQ9Y276 419 aa27.26■■□□□ 1.95
SYNGR3-201ENST00000248121 OTUD7BQ6GQQ9 843 aa27.25■■□□□ 1.95
SYNGR3-201ENST00000248121 TEX11Q8IYF3 940 aa27.25■■□□□ 1.95
SYNGR3-201ENST00000248121 SYAP1Q96A49 352 aaPredicted RBP27.25■■□□□ 1.95
SYNGR3-201ENST00000248121 SAP30BPQ9UHR5 308 aaKnown RBP27.25■■□□□ 1.95
SYNGR3-201ENST00000248121 NTRK3Q16288 839 aa27.25■■□□□ 1.95
SYNGR3-201ENST00000248121 CCDC144CPQ8IYA2 1237 aa27.25■■□□□ 1.95
SYNGR3-201ENST00000248121 MTA3Q9BTC8 594 aa27.25■■□□□ 1.95
SYNGR3-201ENST00000248121 NFKBIEO00221 500 aa27.24■■□□□ 1.95
SYNGR3-201ENST00000248121 FGRP09769 529 aa27.24■■□□□ 1.95
SYNGR3-201ENST00000248121 SPATA32Q96LK8 384 aa27.24■■□□□ 1.95
SYNGR3-201ENST00000248121 ARFGEF1Q9Y6D6 1849 aa27.24■■□□□ 1.95
SYNGR3-201ENST00000248121 FLT1P17948 1338 aa27.23■■□□□ 1.95
SYNGR3-201ENST00000248121 GJB4Q9NTQ9 266 aa27.23■■□□□ 1.95
SYNGR3-201ENST00000248121 ARPP21Q9UBL0 812 aaPredicted RBP27.23■■□□□ 1.95
SYNGR3-201ENST00000248121 SLC12A7Q9Y666 1083 aa27.23■■□□□ 1.95
SYNGR3-201ENST00000248121 NID2Q14112 1375 aa27.23■■□□□ 1.95
SYNGR3-201ENST00000248121 RAD17O75943 681 aa27.23■■□□□ 1.95
SYNGR3-201ENST00000248121 GRIPAP1Q4V328 841 aa27.23■■□□□ 1.95
SYNGR3-201ENST00000248121 SLF2Q8IX21 1173 aa27.23■■□□□ 1.95
SYNGR3-201ENST00000248121 RBSNQ9H1K0 784 aa27.23■■□□□ 1.95
SYNGR3-201ENST00000248121 GOLGA8AA7E2F4 631 aa27.22■■□□□ 1.95
SYNGR3-201ENST00000248121 SBK1Q52WX2 424 aa27.22■■□□□ 1.95
SYNGR3-201ENST00000248121 FBXO18Q8NFZ0 1043 aa27.22■■□□□ 1.95
SYNGR3-201ENST00000248121 DYNLL2Q96FJ2 89 aa27.22■■□□□ 1.95
SYNGR3-201ENST00000248121 CCDC69A6NI79 296 aa27.21■■□□□ 1.95
SYNGR3-201ENST00000248121 RANBP6O60518 1105 aaKnown RBP27.21■■□□□ 1.95
SYNGR3-201ENST00000248121 CRKP46108 304 aa27.21■■□□□ 1.95
SYNGR3-201ENST00000248121 PLCD1P51178 756 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms