RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 DHX36Q9H2U1 1008 aaKnown RBP13.62□□□□□ -0.23
TREM1-201ENST00000244709 RRAGCQ9HB90 399 aa13.62□□□□□ -0.23
TREM1-201ENST00000244709 PRDM1O75626 825 aa13.61□□□□□ -0.23
TREM1-201ENST00000244709 SLC3A2P08195 630 aaKnown RBP13.61□□□□□ -0.23
TREM1-201ENST00000244709 SLURP2P0DP57 97 aa13.61□□□□□ -0.23
TREM1-201ENST00000244709 CPA1P15085 419 aa13.61□□□□□ -0.23
TREM1-201ENST00000244709 CASTP20810 708 aaKnown RBP13.61□□□□□ -0.23
TREM1-201ENST00000244709 MFSD6Q6ZSS7 791 aa13.61□□□□□ -0.23
TREM1-201ENST00000244709 SLC44A5Q8NCS7 719 aa13.61□□□□□ -0.23
TREM1-201ENST00000244709 ZNF526Q8TF50 670 aaPredicted RBP13.61□□□□□ -0.23
TREM1-201ENST00000244709 NEK1Q96PY6 1258 aa13.61□□□□□ -0.23
TREM1-201ENST00000244709 RNF41Q9H4P4 317 aaPredicted RBP13.61□□□□□ -0.23
TREM1-201ENST00000244709 PGAP2Q9UHJ9 254 aa13.61□□□□□ -0.23
TREM1-201ENST00000244709 PITPNM2Q9BZ72 1349 aa13.61□□□□□ -0.23
TREM1-201ENST00000244709 FGRP09769 529 aa13.6□□□□□ -0.23
TREM1-201ENST00000244709 PSMA5P28066 241 aa13.6□□□□□ -0.23
TREM1-201ENST00000244709 GABPAQ06546 454 aa13.6□□□□□ -0.23
TREM1-201ENST00000244709 RRP12Q5JTH9 1297 aaKnown RBP13.6□□□□□ -0.23
TREM1-201ENST00000244709 C16orf86Q6ZW13 317 aa13.6□□□□□ -0.23
TREM1-201ENST00000244709 NCOA7Q8NI08 942 aa13.6□□□□□ -0.23
TREM1-201ENST00000244709 CSRNP1Q96S65 589 aa13.6□□□□□ -0.23
TREM1-201ENST00000244709 UPF3BQ9BZI7 483 aaKnown RBP13.6□□□□□ -0.23
TREM1-201ENST00000244709 TM6SF1Q9BZW5 370 aa13.6□□□□□ -0.23
TREM1-201ENST00000244709 DEFB129Q9H1M3 183 aa13.6□□□□□ -0.23
TREM1-201ENST00000244709 TOMM22Q9NS69 142 aa13.6□□□□□ -0.23
TREM1-201ENST00000244709 PI4KBQ9UBF8 816 aa13.6□□□□□ -0.23
TREM1-201ENST00000244709 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.6□□□□□ -0.23
TREM1-201ENST00000244709 B4E1Z4 1266 aa13.59□□□□□ -0.23
TREM1-201ENST00000244709 CDK8P49336 464 aa13.59□□□□□ -0.23
TREM1-201ENST00000244709 PDE4BQ07343 736 aa13.59□□□□□ -0.23
TREM1-201ENST00000244709 TRDNQ13061 729 aa13.59□□□□□ -0.23
TREM1-201ENST00000244709 RABEP1Q15276 862 aa13.59□□□□□ -0.23
TREM1-201ENST00000244709 BLOC1S2Q6QNY1 142 aa13.59□□□□□ -0.23
TREM1-201ENST00000244709 RALYLQ86SE5 291 aaKnown RBP13.59□□□□□ -0.23
TREM1-201ENST00000244709 PNMA8AQ86V59 439 aaPredicted RBP13.59□□□□□ -0.23
TREM1-201ENST00000244709 MB21D2Q8IYB1 491 aaPredicted RBP13.59□□□□□ -0.23
TREM1-201ENST00000244709 TEPSINQ96N21 525 aa13.59□□□□□ -0.23
TREM1-201ENST00000244709 EHD4Q9H223 541 aa13.59□□□□□ -0.23
TREM1-201ENST00000244709 ZSWIM6Q9HCJ5 1215 aa13.59□□□□□ -0.23
TREM1-201ENST00000244709 NMRK2Q9NPI5 230 aa13.59□□□□□ -0.23
TREM1-201ENST00000244709 SERPINB13Q9UIV8 391 aa13.59□□□□□ -0.23
TREM1-201ENST00000244709 RBM19Q9Y4C8 960 aaKnown RBP13.59□□□□□ -0.23
TREM1-201ENST00000244709 FAM196BA6NMK8 535 aa13.59□□□□□ -0.23
TREM1-201ENST00000244709 POTEIP0CG38 1075 aa13.59□□□□□ -0.23
TREM1-201ENST00000244709 POTEJP0CG39 1038 aa13.59□□□□□ -0.23
TREM1-201ENST00000244709 VEGFAP15692 232 aaPredicted RBP13.59□□□□□ -0.23
TREM1-201ENST00000244709 ZC3H15Q8WU90 426 aaKnown RBP13.59□□□□□ -0.23
TREM1-201ENST00000244709 DCPSQ96C86 337 aaKnown RBP13.59□□□□□ -0.23
TREM1-201ENST00000244709 KRT23Q9C075 422 aa13.59□□□□□ -0.23
TREM1-201ENST00000244709 DNAJC18Q9H819 358 aa13.59□□□□□ -0.23
TREM1-201ENST00000244709 CNNM2Q9H8M5 875 aa13.59□□□□□ -0.23
TREM1-201ENST00000244709 ADM5C9JUS6 153 aa13.58□□□□□ -0.24
TREM1-201ENST00000244709 ORC4O43929 436 aa13.58□□□□□ -0.24
TREM1-201ENST00000244709 KDM4AO75164 1064 aa13.58□□□□□ -0.24
TREM1-201ENST00000244709 PCP11498 1178 aaKnown RBP13.58□□□□□ -0.24
TREM1-201ENST00000244709 RPS6KB1P23443 525 aa13.58□□□□□ -0.24
TREM1-201ENST00000244709 RUFY3Q7L099 469 aa13.58□□□□□ -0.24
TREM1-201ENST00000244709 CYB5R4Q7L1T6 521 aa13.58□□□□□ -0.24
TREM1-201ENST00000244709 CHST3Q7LGC8 479 aa13.58□□□□□ -0.24
TREM1-201ENST00000244709 CRACR2BQ8N4Y2 399 aaPredicted RBP13.58□□□□□ -0.24
TREM1-201ENST00000244709 TCEANC2Q96MN5 208 aa13.58□□□□□ -0.24
TREM1-201ENST00000244709 TRIM34Q9BYJ4 488 aa13.58□□□□□ -0.24
TREM1-201ENST00000244709 MKNK2Q9HBH9 465 aa13.58□□□□□ -0.24
TREM1-201ENST00000244709 SWAP70Q9UH65 585 aa13.58□□□□□ -0.24
TREM1-201ENST00000244709 PPP2R3BQ9Y5P8 575 aa13.58□□□□□ -0.24
TREM1-201ENST00000244709 CYP46A1Q9Y6A2 500 aa13.58□□□□□ -0.24
TREM1-201ENST00000244709 HMGB1P09429 215 aaKnown RBP13.57□□□□□ -0.24
TREM1-201ENST00000244709 SHMT1P34896 483 aa13.57□□□□□ -0.24
TREM1-201ENST00000244709 NEK4P51957 841 aa13.57□□□□□ -0.24
TREM1-201ENST00000244709 ANTXR2P58335 489 aa13.57□□□□□ -0.24
TREM1-201ENST00000244709 NBPF12Q5TAG4 269 aaPredicted RBP13.57□□□□□ -0.24
TREM1-201ENST00000244709 PRAMEF18Q5VWM3 479 aa13.57□□□□□ -0.24
TREM1-201ENST00000244709 METTL16Q86W50 562 aaKnown RBP13.57□□□□□ -0.24
TREM1-201ENST00000244709 FOXP4Q8IVH2 680 aaPredicted RBP13.57□□□□□ -0.24
TREM1-201ENST00000244709 SULF1Q8IWU6 871 aa13.57□□□□□ -0.24
TREM1-201ENST00000244709 CLEC11AQ9Y240 323 aa13.57□□□□□ -0.24
TREM1-201ENST00000244709 GREB1LQ9C091 1923 aaPredicted RBP13.57□□□□□ -0.24
TREM1-201ENST00000244709 ATAD5Q96QE3 1844 aa13.57□□□□□ -0.24
TREM1-201ENST00000244709 RANBP6O60518 1105 aaKnown RBP13.56□□□□□ -0.24
TREM1-201ENST00000244709 RASA1P20936 1047 aa13.56□□□□□ -0.24
TREM1-201ENST00000244709 EXOSC10Q01780 885 aaKnown RBP13.56□□□□□ -0.24
TREM1-201ENST00000244709 FAM47AQ5JRC9 791 aa13.56□□□□□ -0.24
TREM1-201ENST00000244709 DLK2Q6UY11 383 aa13.56□□□□□ -0.24
TREM1-201ENST00000244709 MIGA2Q7L4E1 593 aa13.56□□□□□ -0.24
TREM1-201ENST00000244709 DHX32Q7L7V1 743 aaKnown RBP13.56□□□□□ -0.24
TREM1-201ENST00000244709 KRT26Q7Z3Y9 468 aa13.56□□□□□ -0.24
TREM1-201ENST00000244709 ESR2Q92731 530 aa13.56□□□□□ -0.24
TREM1-201ENST00000244709 LRRC2Q9BYS8 371 aa13.56□□□□□ -0.24
TREM1-201ENST00000244709 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.56□□□□□ -0.24
TREM1-201ENST00000244709 ZNF287Q9HBT7 754 aa13.56□□□□□ -0.24
TREM1-201ENST00000244709 PDRG1Q9NUG6 133 aa13.56□□□□□ -0.24
TREM1-201ENST00000244709 ZSWIM5Q9P217 1185 aa13.56□□□□□ -0.24
TREM1-201ENST00000244709 HERC5Q9UII4 1024 aaKnown RBP13.56□□□□□ -0.24
TREM1-201ENST00000244709 SSC5DA1L4H1 1573 aa13.56□□□□□ -0.24
TREM1-201ENST00000244709 PRC1O43663 620 aa13.56□□□□□ -0.24
TREM1-201ENST00000244709 MCM5P33992 734 aa13.56□□□□□ -0.24
TREM1-201ENST00000244709 USP48Q86UV5 1035 aa13.56□□□□□ -0.24
TREM1-201ENST00000244709 ZNF444Q8N0Y2 327 aaPredicted RBP13.56□□□□□ -0.24
TREM1-201ENST00000244709 TTC14Q96N46 770 aa13.56□□□□□ -0.24
TREM1-201ENST00000244709 TBC1D12O60347 775 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms