RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 GPBP1L1Q9HC44 474 aaPredicted RBP23.97■■□□□ 1.43
SNRPA-201ENST00000243563 ANAPC4Q9UJX5 808 aa23.97■■□□□ 1.43
SNRPA-201ENST00000243563 ZNF213O14771 459 aa23.96■■□□□ 1.43
SNRPA-201ENST00000243563 KIF3CO14782 793 aa23.96■■□□□ 1.43
SNRPA-201ENST00000243563 YY1P25490 414 aa23.96■■□□□ 1.43
SNRPA-201ENST00000243563 TNNI2P48788 182 aa23.96■■□□□ 1.43
SNRPA-201ENST00000243563 TNFAIP1Q13829 316 aa23.96■■□□□ 1.43
SNRPA-201ENST00000243563 IMMTQ16891 758 aaKnown RBP23.96■■□□□ 1.43
SNRPA-201ENST00000243563 KRT26Q7Z3Y9 468 aa23.96■■□□□ 1.43
SNRPA-201ENST00000243563 CSRNP1Q96S65 589 aa23.96■■□□□ 1.43
SNRPA-201ENST00000243563 NEDD4P46934 1319 aa23.96■■□□□ 1.43
SNRPA-201ENST00000243563 GABPAQ06546 454 aa23.95■■□□□ 1.43
SNRPA-201ENST00000243563 ADCK5Q3MIX3 580 aa23.95■■□□□ 1.43
SNRPA-201ENST00000243563 FZD1Q9UP38 647 aa23.95■■□□□ 1.43
SNRPA-201ENST00000243563 PAPPA2Q9BXP8 1791 aa23.95■■□□□ 1.43
SNRPA-201ENST00000243563 LDHDQ86WU2 507 aa23.95■■□□□ 1.42
SNRPA-201ENST00000243563 TBC1D32Q96NH3 1257 aa23.95■■□□□ 1.42
SNRPA-201ENST00000243563 DHX36Q9H2U1 1008 aaKnown RBP23.95■■□□□ 1.42
SNRPA-201ENST00000243563 OTOFQ9HC10 1997 aa23.94■■□□□ 1.42
SNRPA-201ENST00000243563 PRDM1O75626 825 aa23.94■■□□□ 1.42
SNRPA-201ENST00000243563 SULF1Q8IWU6 871 aa23.94■■□□□ 1.42
SNRPA-201ENST00000243563 KIF2CQ99661 725 aa23.94■■□□□ 1.42
SNRPA-201ENST00000243563 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.94■■□□□ 1.42
SNRPA-201ENST00000243563 ATAD5Q96QE3 1844 aa23.94■■□□□ 1.42
SNRPA-201ENST00000243563 E7EWF7 191 aa23.93■■□□□ 1.42
SNRPA-201ENST00000243563 TRAF5O00463 557 aa23.93■■□□□ 1.42
SNRPA-201ENST00000243563 RBM25P49756 843 aaKnown RBP23.93■■□□□ 1.42
SNRPA-201ENST00000243563 MIGA2Q7L4E1 593 aa23.93■■□□□ 1.42
SNRPA-201ENST00000243563 TTC6Q86TZ1 520 aa23.93■■□□□ 1.42
SNRPA-201ENST00000243563 RRP1BQ14684 758 aaKnown RBP23.92■■□□□ 1.42
SNRPA-201ENST00000243563 SHROOM1Q2M3G4 852 aaPredicted RBP23.92■■□□□ 1.42
SNRPA-201ENST00000243563 C16orf86Q6ZW13 317 aa23.92■■□□□ 1.42
SNRPA-201ENST00000243563 PI4KBQ9UBF8 816 aa23.92■■□□□ 1.42
SNRPA-201ENST00000243563 SERPINB13Q9UIV8 391 aa23.92■■□□□ 1.42
SNRPA-201ENST00000243563 GREB1LQ9C091 1923 aaPredicted RBP23.92■■□□□ 1.42
SNRPA-201ENST00000243563 HLA-DOAP06340 250 aa23.92■■□□□ 1.42
SNRPA-201ENST00000243563 SHMT1P34896 483 aa23.92■■□□□ 1.42
SNRPA-201ENST00000243563 CDK8P49336 464 aa23.92■■□□□ 1.42
SNRPA-201ENST00000243563 AKNAD1Q5T1N1 836 aa23.92■■□□□ 1.42
SNRPA-201ENST00000243563 METTL16Q86W50 562 aaKnown RBP23.92■■□□□ 1.42
SNRPA-201ENST00000243563 ZNF784Q8NCA9 323 aaPredicted RBP23.92■■□□□ 1.42
SNRPA-201ENST00000243563 STAG1Q8WVM7 1258 aa23.92■■□□□ 1.42
SNRPA-201ENST00000243563 CDCA5Q96FF9 252 aa23.92■■□□□ 1.42
SNRPA-201ENST00000243563 EHD4Q9H223 541 aa23.92■■□□□ 1.42
SNRPA-201ENST00000243563 PPP2R3BQ9Y5P8 575 aa23.92■■□□□ 1.42
SNRPA-201ENST00000243563 EIF5BO60841 1220 aaKnown RBP23.91■■□□□ 1.42
SNRPA-201ENST00000243563 FGRP09769 529 aa23.91■■□□□ 1.42
SNRPA-201ENST00000243563 CPA1P15085 419 aa23.91■■□□□ 1.42
SNRPA-201ENST00000243563 AMOTL1Q8IY63 956 aa23.91■■□□□ 1.42
SNRPA-201ENST00000243563 MCCP23508 829 aa23.9■■□□□ 1.42
SNRPA-201ENST00000243563 TSGA10IPQ3SY00 556 aa23.9■■□□□ 1.42
SNRPA-201ENST00000243563 CDC37L1Q7L3B6 337 aa23.9■■□□□ 1.42
SNRPA-201ENST00000243563 UPF2Q9HAU5 1272 aaKnown RBP23.9■■□□□ 1.42
SNRPA-201ENST00000243563 TRPM7Q96QT4 1865 aa23.89■■□□□ 1.42
SNRPA-201ENST00000243563 JAG1P78504 1218 aa23.89■■□□□ 1.42
SNRPA-201ENST00000243563 RNF20Q5VTR2 975 aa23.89■■□□□ 1.42
SNRPA-201ENST00000243563 B4E1Z4 1266 aa23.88■■□□□ 1.41
SNRPA-201ENST00000243563 RASA1P20936 1047 aa23.88■■□□□ 1.41
SNRPA-201ENST00000243563 MAP3K10Q02779 954 aa23.88■■□□□ 1.41
SNRPA-201ENST00000243563 RRP12Q5JTH9 1297 aaKnown RBP23.88■■□□□ 1.41
SNRPA-201ENST00000243563 CRACR2BQ8N4Y2 399 aaPredicted RBP23.88■■□□□ 1.41
SNRPA-201ENST00000243563 IL17RAQ96F46 866 aa23.88■■□□□ 1.41
SNRPA-201ENST00000243563 CHADLQ6NUI6 762 aa23.88■■□□□ 1.41
SNRPA-201ENST00000243563 MFSD6Q6ZSS7 791 aa23.88■■□□□ 1.41
SNRPA-201ENST00000243563 FOXP4Q8IVH2 680 aaPredicted RBP23.88■■□□□ 1.41
SNRPA-201ENST00000243563 JAKMIP1Q96N16 626 aaKnown RBP23.88■■□□□ 1.41
SNRPA-201ENST00000243563 DOCK1Q14185 1865 aa23.87■■□□□ 1.41
SNRPA-201ENST00000243563 ITGBL1O95965 494 aaPredicted RBP23.87■■□□□ 1.41
SNRPA-201ENST00000243563 ZKSCAN1P17029 563 aaPredicted RBP23.87■■□□□ 1.41
SNRPA-201ENST00000243563 PRKG1Q13976 671 aa23.87■■□□□ 1.41
SNRPA-201ENST00000243563 FAM47AQ5JRC9 791 aa23.87■■□□□ 1.41
SNRPA-201ENST00000243563 CYB5R4Q7L1T6 521 aa23.87■■□□□ 1.41
SNRPA-201ENST00000243563 MB21D2Q8IYB1 491 aaPredicted RBP23.87■■□□□ 1.41
SNRPA-201ENST00000243563 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.87■■□□□ 1.41
SNRPA-201ENST00000243563 ORC4O43929 436 aa23.86■■□□□ 1.41
SNRPA-201ENST00000243563 TATDN1Q6P1N9 297 aa23.86■■□□□ 1.41
SNRPA-201ENST00000243563 TOMM22Q9NS69 142 aa23.86■■□□□ 1.41
SNRPA-201ENST00000243563 PHF20L1A8MW92 1017 aa23.85■■□□□ 1.41
SNRPA-201ENST00000243563 TBC1D12O60347 775 aa23.85■■□□□ 1.41
SNRPA-201ENST00000243563 ANTXR2P58335 489 aa23.85■■□□□ 1.41
SNRPA-201ENST00000243563 ANAPC15P60006 121 aa23.85■■□□□ 1.41
SNRPA-201ENST00000243563 MOB2Q70IA6 237 aa23.85■■□□□ 1.41
SNRPA-201ENST00000243563 CHST3Q7LGC8 479 aa23.85■■□□□ 1.41
SNRPA-201ENST00000243563 TCEANC2Q96MN5 208 aa23.85■■□□□ 1.41
SNRPA-201ENST00000243563 UPF3BQ9BZI7 483 aaKnown RBP23.85■■□□□ 1.41
SNRPA-201ENST00000243563 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.85■■□□□ 1.41
SNRPA-201ENST00000243563 HERC5Q9UII4 1024 aaKnown RBP23.85■■□□□ 1.41
SNRPA-201ENST00000243563 KDM4AO75164 1064 aa23.84■■□□□ 1.41
SNRPA-201ENST00000243563 SLC3A2P08195 630 aaKnown RBP23.84■■□□□ 1.41
SNRPA-201ENST00000243563 AKR1B1P15121 316 aa23.84■■□□□ 1.41
SNRPA-201ENST00000243563 PDE4BQ07343 736 aa23.84■■□□□ 1.41
SNRPA-201ENST00000243563 SWAP70Q9UH65 585 aa23.84■■□□□ 1.41
SNRPA-201ENST00000243563 GDF11O95390 407 aa23.84■■□□□ 1.41
SNRPA-201ENST00000243563 NEK1Q96PY6 1258 aa23.84■■□□□ 1.41
SNRPA-201ENST00000243563 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.84■■□□□ 1.41
SNRPA-201ENST00000243563 RNF41Q9H4P4 317 aaPredicted RBP23.84■■□□□ 1.41
SNRPA-201ENST00000243563 MKNK2Q9HBH9 465 aa23.84■■□□□ 1.41
SNRPA-201ENST00000243563 RANBP6O60518 1105 aaKnown RBP23.83■■□□□ 1.41
SNRPA-201ENST00000243563 USP2O75604 605 aaPredicted RBP23.83■■□□□ 1.41
SNRPA-201ENST00000243563 CASTP20810 708 aaKnown RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms