RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 MAN1A1P33908 653 aa15.38■□□□□ 0.05
TARDBP-201ENST00000240185 FAM69CQ0P6D2 419 aa15.38■□□□□ 0.05
TARDBP-201ENST00000240185 PPP2R5CQ13362 524 aa15.38■□□□□ 0.05
TARDBP-201ENST00000240185 FAM173BQ6P4H8 233 aa15.38■□□□□ 0.05
TARDBP-201ENST00000240185 SYCE1Q8N0S2 351 aa15.38■□□□□ 0.05
TARDBP-201ENST00000240185 NLRP12P59046 1061 aa15.38■□□□□ 0.05
TARDBP-201ENST00000240185 E2F5Q15329 346 aa15.38■□□□□ 0.05
TARDBP-201ENST00000240185 CCDC93Q567U6 631 aa15.38■□□□□ 0.05
TARDBP-201ENST00000240185 PARP2Q9UGN5 583 aa15.38■□□□□ 0.05
TARDBP-201ENST00000240185 TTC41PQ6P2S7 1318 aa15.38■□□□□ 0.05
TARDBP-201ENST00000240185 C9orf84Q5VXU9 1444 aa15.38■□□□□ 0.05
TARDBP-201ENST00000240185 ZNF500O60304 480 aaPredicted RBP15.38■□□□□ 0.05
TARDBP-201ENST00000240185 CPA1P15085 419 aa15.38■□□□□ 0.05
TARDBP-201ENST00000240185 WDR46O15213 610 aaKnown RBP15.37■□□□□ 0.05
TARDBP-201ENST00000240185 CHMLP26374 656 aa15.37■□□□□ 0.05
TARDBP-201ENST00000240185 AEBP2Q6ZN18 517 aaPredicted RBP15.37■□□□□ 0.05
TARDBP-201ENST00000240185 GPIHBP1Q8IV16 184 aa15.37■□□□□ 0.05
TARDBP-201ENST00000240185 EFCAB8A8MWE9 144 aa15.37■□□□□ 0.05
TARDBP-201ENST00000240185 LRRC23Q53EV4 343 aaPredicted RBP15.37■□□□□ 0.05
TARDBP-201ENST00000240185 LCA5Q86VQ0 697 aa15.37■□□□□ 0.05
TARDBP-201ENST00000240185 ATP2A3Q93084 1043 aa15.37■□□□□ 0.05
TARDBP-201ENST00000240185 THEGQ9P2T0 379 aa15.37■□□□□ 0.05
TARDBP-201ENST00000240185 IQSEC3Q9UPP2 1182 aaPredicted RBP15.37■□□□□ 0.05
TARDBP-201ENST00000240185 POLR2DO15514 142 aaKnown RBP15.37■□□□□ 0.05
TARDBP-201ENST00000240185 THEMISQ8N1K5 641 aaPredicted RBP15.37■□□□□ 0.05
TARDBP-201ENST00000240185 P3H4Q92791 437 aa15.37■□□□□ 0.05
TARDBP-201ENST00000240185 ANKRD13DQ6ZTN6 518 aa15.37■□□□□ 0.05
TARDBP-201ENST00000240185 FNBP1Q96RU3 617 aa15.37■□□□□ 0.05
TARDBP-201ENST00000240185 KLHL30Q0D2K2 578 aa15.36■□□□□ 0.05
TARDBP-201ENST00000240185 CASC4Q6P4E1 433 aa15.36■□□□□ 0.05
TARDBP-201ENST00000240185 FLOT1O75955 427 aa15.36■□□□□ 0.05
TARDBP-201ENST00000240185 STK10O94804 968 aaKnown RBP15.36■□□□□ 0.05
TARDBP-201ENST00000240185 IFIH1Q9BYX4 1025 aaKnown RBP15.36■□□□□ 0.05
TARDBP-201ENST00000240185 DCTPP1Q9H773 170 aa15.36■□□□□ 0.05
TARDBP-201ENST00000240185 CAMSAP2Q08AD1 1489 aa15.36■□□□□ 0.05
TARDBP-201ENST00000240185 SRGAP1Q7Z6B7 1085 aa15.36■□□□□ 0.05
TARDBP-201ENST00000240185 EFCAB13Q8IY85 973 aa15.36■□□□□ 0.05
TARDBP-201ENST00000240185 ZBTB21Q9ULJ3 1066 aa15.36■□□□□ 0.05
TARDBP-201ENST00000240185 RNF113AO15541 343 aaKnown RBP15.35■□□□□ 0.05
TARDBP-201ENST00000240185 INPP1P49441 399 aa15.35■□□□□ 0.05
TARDBP-201ENST00000240185 PHEXP78562 749 aa15.35■□□□□ 0.05
TARDBP-201ENST00000240185 LETM2Q2VYF4 491 aa15.35■□□□□ 0.05
TARDBP-201ENST00000240185 PLEKHM2Q8IWE5 1019 aa15.35■□□□□ 0.05
TARDBP-201ENST00000240185 PDZD8Q8NEN9 1154 aa15.35■□□□□ 0.05
TARDBP-201ENST00000240185 EFCC1Q9HA90 598 aa15.35■□□□□ 0.05
TARDBP-201ENST00000240185 ZNF202O95125 648 aa15.35■□□□□ 0.05
TARDBP-201ENST00000240185 SERPINB6P35237 376 aa15.35■□□□□ 0.05
TARDBP-201ENST00000240185 IL15P40933 162 aaPredicted RBP15.35■□□□□ 0.05
TARDBP-201ENST00000240185 CTAGE3PQ8IX95 158 aa15.35■□□□□ 0.05
TARDBP-201ENST00000240185 MRPL46Q9H2W6 279 aaKnown RBP15.35■□□□□ 0.05
TARDBP-201ENST00000240185 PDE11AQ9HCR9 933 aa15.35■□□□□ 0.05
TARDBP-201ENST00000240185 WWC3Q9ULE0 1092 aa15.35■□□□□ 0.05
TARDBP-201ENST00000240185 VPS41P49754 854 aa15.35■□□□□ 0.05
TARDBP-201ENST00000240185 NCBP1Q09161 790 aaKnown RBP15.35■□□□□ 0.05
TARDBP-201ENST00000240185 RPS6KA2Q15349 733 aa15.35■□□□□ 0.05
TARDBP-201ENST00000240185 XPO4Q9C0E2 1151 aaKnown RBP15.35■□□□□ 0.05
TARDBP-201ENST00000240185 GADD45BO75293 160 aaPredicted RBP15.35■□□□□ 0.05
TARDBP-201ENST00000240185 PPP4R1Q8TF05 950 aa15.35■□□□□ 0.05
TARDBP-201ENST00000240185 USTQ9Y2C2 406 aa15.35■□□□□ 0.05
TARDBP-201ENST00000240185 JRKLQ9Y4A0 524 aa15.35■□□□□ 0.05
TARDBP-201ENST00000240185 NESP48681 1621 aa15.35■□□□□ 0.05
TARDBP-201ENST00000240185 LONRF2Q1L5Z9 754 aa15.35■□□□□ 0.05
TARDBP-201ENST00000240185 ZNF219Q9P2Y4 722 aaPredicted RBP15.35■□□□□ 0.05
TARDBP-201ENST00000240185 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.35■□□□□ 0.05
TARDBP-201ENST00000240185 RAD50Q92878 1312 aa15.34■□□□□ 0.05
TARDBP-201ENST00000240185 IFT88Q13099 833 aa15.34■□□□□ 0.05
TARDBP-201ENST00000240185 KLHDC4Q8TBB5 520 aa15.34■□□□□ 0.05
TARDBP-201ENST00000240185 DNMBPQ6XZF7 1577 aa15.34■□□□□ 0.05
TARDBP-201ENST00000240185 ADKP55263 362 aaKnown RBP15.34■□□□□ 0.05
TARDBP-201ENST00000240185 POLE2P56282 527 aa15.34■□□□□ 0.05
TARDBP-201ENST00000240185 E2F4Q16254 413 aa15.34■□□□□ 0.05
TARDBP-201ENST00000240185 LMBR1LQ6UX01 489 aa15.34■□□□□ 0.05
TARDBP-201ENST00000240185 RSPH3Q86UC2 560 aa15.34■□□□□ 0.05
TARDBP-201ENST00000240185 CCDC13Q8IYE1 715 aa15.34■□□□□ 0.05
TARDBP-201ENST00000240185 TRIM6Q9C030 488 aaPredicted RBP15.34■□□□□ 0.05
TARDBP-201ENST00000240185 PA2G4Q9UQ80 394 aaKnown RBP15.34■□□□□ 0.05
TARDBP-201ENST00000240185 CA8P35219 290 aa15.34■□□□□ 0.05
TARDBP-201ENST00000240185 GRM8O00222 908 aa15.34■□□□□ 0.05
TARDBP-201ENST00000240185 DAPK3O43293 454 aa15.34■□□□□ 0.05
TARDBP-201ENST00000240185 CUTAO60888 179 aa15.34■□□□□ 0.05
TARDBP-201ENST00000240185 ETF1P62495 437 aaKnown RBP15.34■□□□□ 0.05
TARDBP-201ENST00000240185 ARHGAP4P98171 946 aa15.34■□□□□ 0.05
TARDBP-201ENST00000240185 SPDL1Q96EA4 605 aa15.34■□□□□ 0.05
TARDBP-201ENST00000240185 LMBRD1Q9NUN5 540 aa15.34■□□□□ 0.05
TARDBP-201ENST00000240185 GNAT2P19087 354 aa15.33■□□□□ 0.05
TARDBP-201ENST00000240185 TTC19Q6DKK2 380 aaPredicted RBP15.33■□□□□ 0.05
TARDBP-201ENST00000240185 TCP11Q8WWU5 503 aa15.33■□□□□ 0.05
TARDBP-201ENST00000240185 MRFAP1L1Q96HT8 127 aa15.33■□□□□ 0.05
TARDBP-201ENST00000240185 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.04
TARDBP-201ENST00000240185 HAUS8Q9BT25 410 aa15.33■□□□□ 0.04
TARDBP-201ENST00000240185 CUL4BQ13620 913 aa15.33■□□□□ 0.04
TARDBP-201ENST00000240185 TYW1BQ6NUM6 668 aa15.33■□□□□ 0.04
TARDBP-201ENST00000240185 CCDC84Q86UT8 332 aaPredicted RBP15.33■□□□□ 0.04
TARDBP-201ENST00000240185 TRIM58Q8NG06 486 aa15.33■□□□□ 0.04
TARDBP-201ENST00000240185 PRPF31Q8WWY3 499 aaKnown RBP15.33■□□□□ 0.04
TARDBP-201ENST00000240185 JPH2Q9BR39 696 aaPredicted RBP15.33■□□□□ 0.04
TARDBP-201ENST00000240185 MAGEB6P1A0A0J9YX57 407 aa15.33■□□□□ 0.04
TARDBP-201ENST00000240185 RNF8O76064 485 aa15.33■□□□□ 0.04
TARDBP-201ENST00000240185 APOEP02649 317 aa15.33■□□□□ 0.04
TARDBP-201ENST00000240185 TMED1Q13445 227 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms