RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 CD2APQ9Y5K6 639 aa17.84■□□□□ 0.45
HDHD3-201ENST00000238379 NAV1Q8NEY1 1877 aa17.84■□□□□ 0.45
HDHD3-201ENST00000238379 ERICH2A1L162 156 aa17.84■□□□□ 0.45
HDHD3-201ENST00000238379 F13A1P00488 732 aa17.84■□□□□ 0.45
HDHD3-201ENST00000238379 PLCD1P51178 756 aa17.84■□□□□ 0.45
HDHD3-201ENST00000238379 HDLBPQ00341 1268 aaKnown RBP17.84■□□□□ 0.45
HDHD3-201ENST00000238379 WTAPQ15007 396 aa17.84■□□□□ 0.45
HDHD3-201ENST00000238379 SLC4A8Q2Y0W8 1093 aa17.84■□□□□ 0.45
HDHD3-201ENST00000238379 DALRD3Q5D0E6 543 aaKnown RBP17.84■□□□□ 0.45
HDHD3-201ENST00000238379 KIAA0825Q8IV33 1275 aa17.84■□□□□ 0.45
HDHD3-201ENST00000238379 AMOTL1Q8IY63 956 aa17.84■□□□□ 0.45
HDHD3-201ENST00000238379 ZSCAN10Q96SZ4 725 aaPredicted RBP17.84■□□□□ 0.45
HDHD3-201ENST00000238379 ZNF277Q9NRM2 450 aaPredicted RBP17.84■□□□□ 0.45
HDHD3-201ENST00000238379 SAP30BPQ9UHR5 308 aaKnown RBP17.84■□□□□ 0.45
HDHD3-201ENST00000238379 DDX60LQ5H9U9 1706 aaKnown RBP17.83■□□□□ 0.44
HDHD3-201ENST00000238379 CCDC69A6NI79 296 aa17.83■□□□□ 0.44
HDHD3-201ENST00000238379 ZBTB43O43298 467 aa17.83■□□□□ 0.44
HDHD3-201ENST00000238379 CRKP46108 304 aa17.83■□□□□ 0.44
HDHD3-201ENST00000238379 MCTP1Q6DN14 999 aa17.83■□□□□ 0.44
HDHD3-201ENST00000238379 LARGE2Q8N3Y3 721 aa17.83■□□□□ 0.44
HDHD3-201ENST00000238379 DYNLL2Q96FJ2 89 aa17.83■□□□□ 0.44
HDHD3-201ENST00000238379 ZDHHC15Q96MV8 337 aa17.83■□□□□ 0.44
HDHD3-201ENST00000238379 PPP1R1BQ9UD71 204 aaPredicted RBP17.83■□□□□ 0.44
HDHD3-201ENST00000238379 SLC12A7Q9Y666 1083 aa17.83■□□□□ 0.44
HDHD3-201ENST00000238379 TNKSO95271 1327 aa17.83■□□□□ 0.44
HDHD3-201ENST00000238379 BRCA1P38398 1863 aaKnown RBP17.82■□□□□ 0.44
HDHD3-201ENST00000238379 VPS37CA5D8V6 355 aaPredicted RBP17.82■□□□□ 0.44
HDHD3-201ENST00000238379 GOLGA6L22H0YM25 854 aa17.82■□□□□ 0.44
HDHD3-201ENST00000238379 WDHD1O75717 1129 aaPredicted RBP17.82■□□□□ 0.44
HDHD3-201ENST00000238379 POLR3DP05423 398 aaPredicted RBP17.82■□□□□ 0.44
HDHD3-201ENST00000238379 METAP2P50579 478 aaKnown RBP eCLIP17.82■□□□□ 0.44
HDHD3-201ENST00000238379 FAM184AQ8NB25 1140 aa17.82■□□□□ 0.44
HDHD3-201ENST00000238379 USP40Q9NVE5 1235 aa17.82■□□□□ 0.44
HDHD3-201ENST00000238379 COL4A5P29400 1685 aa17.82■□□□□ 0.44
HDHD3-201ENST00000238379 FDPSP14324 419 aaKnown RBP17.82■□□□□ 0.44
HDHD3-201ENST00000238379 RXRAP19793 462 aa17.82■□□□□ 0.44
HDHD3-201ENST00000238379 ADD1P35611 737 aaKnown RBP17.82■□□□□ 0.44
HDHD3-201ENST00000238379 NT5C2P49902 561 aa17.82■□□□□ 0.44
HDHD3-201ENST00000238379 FOCADQ5VW36 1801 aa17.82■□□□□ 0.44
HDHD3-201ENST00000238379 CDC42EP5Q6NZY7 148 aa17.82■□□□□ 0.44
HDHD3-201ENST00000238379 CDC37L1Q7L3B6 337 aa17.82■□□□□ 0.44
HDHD3-201ENST00000238379 MICU3Q86XE3 530 aa17.82■□□□□ 0.44
HDHD3-201ENST00000238379 IQCA1Q86XH1 822 aa17.82■□□□□ 0.44
HDHD3-201ENST00000238379 ADAMTSL1Q8N6G6 1762 aa17.82■□□□□ 0.44
HDHD3-201ENST00000238379 ENAHQ8N8S7 591 aaPredicted RBP17.82■□□□□ 0.44
HDHD3-201ENST00000238379 FAM217BQ9NTX9 383 aaPredicted RBP17.82■□□□□ 0.44
HDHD3-201ENST00000238379 NID2Q14112 1375 aa17.81■□□□□ 0.44
HDHD3-201ENST00000238379 CPLX1O14810 134 aa17.81■□□□□ 0.44
HDHD3-201ENST00000238379 CDC27P30260 824 aa17.81■□□□□ 0.44
HDHD3-201ENST00000238379 MYL10Q9BUA6 226 aa17.81■□□□□ 0.44
HDHD3-201ENST00000238379 GOLGB1Q14789 3259 aaKnown RBP17.8■□□□□ 0.44
HDHD3-201ENST00000238379 PPFIA3O75145 1194 aa17.8■□□□□ 0.44
HDHD3-201ENST00000238379 PTMSP20962 102 aa17.8■□□□□ 0.44
HDHD3-201ENST00000238379 RCAN1P53805 252 aa17.8■□□□□ 0.44
HDHD3-201ENST00000238379 FAM47AQ5JRC9 791 aa17.8■□□□□ 0.44
HDHD3-201ENST00000238379 SYNE3Q6ZMZ3 975 aa17.8■□□□□ 0.44
HDHD3-201ENST00000238379 DDX4Q9NQI0 724 aaKnown RBP17.8■□□□□ 0.44
HDHD3-201ENST00000238379 SERPINA10Q9UK55 444 aa17.8■□□□□ 0.44
HDHD3-201ENST00000238379 KIF3AQ9Y496 699 aa17.8■□□□□ 0.44
HDHD3-201ENST00000238379 PSME4Q14997 1843 aa17.8■□□□□ 0.44
HDHD3-201ENST00000238379 GOLGA8AA7E2F4 631 aa17.79■□□□□ 0.44
HDHD3-201ENST00000238379 TRAK2O60296 914 aa17.79■□□□□ 0.44
HDHD3-201ENST00000238379 PCDHAC2Q9Y5I4 1007 aa17.79■□□□□ 0.44
HDHD3-201ENST00000238379 TSPY2A6NKD2 308 aa17.79■□□□□ 0.44
HDHD3-201ENST00000238379 VIL1P09327 827 aaKnown RBP17.79■□□□□ 0.44
HDHD3-201ENST00000238379 IARSP41252 1262 aaKnown RBP17.79■□□□□ 0.44
HDHD3-201ENST00000238379 PICALMQ13492 652 aa17.79■□□□□ 0.44
HDHD3-201ENST00000238379 NTRK3Q16288 839 aa17.79■□□□□ 0.44
HDHD3-201ENST00000238379 C16orf86Q6ZW13 317 aa17.79■□□□□ 0.44
HDHD3-201ENST00000238379 CCDC144CPQ8IYA2 1237 aa17.79■□□□□ 0.44
HDHD3-201ENST00000238379 ZNF654Q8IZM8 581 aa17.79■□□□□ 0.44
HDHD3-201ENST00000238379 KLHL34Q8N239 644 aa17.79■□□□□ 0.44
HDHD3-201ENST00000238379 SLC44A5Q8NCS7 719 aa17.79■□□□□ 0.44
HDHD3-201ENST00000238379 MKNK2Q9HBH9 465 aa17.79■□□□□ 0.44
HDHD3-201ENST00000238379 LMBRD1Q9NUN5 540 aa17.79■□□□□ 0.44
HDHD3-201ENST00000238379 ATP6V1DQ9Y5K8 247 aa17.79■□□□□ 0.44
HDHD3-201ENST00000238379 MYH1P12882 1939 aa17.78■□□□□ 0.44
HDHD3-201ENST00000238379 NMT2O60551 498 aa17.78■□□□□ 0.44
HDHD3-201ENST00000238379 RAD17O75943 681 aa17.78■□□□□ 0.44
HDHD3-201ENST00000238379 TFAP4Q01664 338 aa17.78■□□□□ 0.44
HDHD3-201ENST00000238379 FOXD4L6Q3SYB3 417 aaPredicted RBP17.78■□□□□ 0.44
HDHD3-201ENST00000238379 IFIT1BQ5T764 474 aaKnown RBP17.78■□□□□ 0.44
HDHD3-201ENST00000238379 RSBN1LQ6PCB5 846 aaPredicted RBP17.78■□□□□ 0.44
HDHD3-201ENST00000238379 FOXD4L3Q6VB84 417 aaPredicted RBP17.78■□□□□ 0.44
HDHD3-201ENST00000238379 ORC3Q9UBD5 711 aaPredicted RBP17.78■□□□□ 0.44
HDHD3-201ENST00000238379 ZNRF3Q9ULT6 936 aa17.78■□□□□ 0.44
HDHD3-201ENST00000238379 MYO3BQ8WXR4 1341 aa17.77■□□□□ 0.44
HDHD3-201ENST00000238379 RASA1P20936 1047 aa17.77■□□□□ 0.44
HDHD3-201ENST00000238379 CDK8P49336 464 aa17.77■□□□□ 0.44
HDHD3-201ENST00000238379 GMLQ99445 158 aa17.77■□□□□ 0.44
HDHD3-201ENST00000238379 TAOK3Q9H2K8 898 aa17.77■□□□□ 0.44
HDHD3-201ENST00000238379 ZNF287Q9HBT7 754 aa17.77■□□□□ 0.44
HDHD3-201ENST00000238379 FER1L6Q2WGJ9 1857 aa17.77■□□□□ 0.44
HDHD3-201ENST00000238379 H3BQV1 296 aa17.77■□□□□ 0.43
HDHD3-201ENST00000238379 NFKBIEO00221 500 aa17.77■□□□□ 0.43
HDHD3-201ENST00000238379 PSMD14O00487 310 aa17.77■□□□□ 0.43
HDHD3-201ENST00000238379 CDKL5O76039 1030 aa17.77■□□□□ 0.43
HDHD3-201ENST00000238379 RBM5P52756 815 aaKnown RBP eCLIP17.77■□□□□ 0.43
HDHD3-201ENST00000238379 NFIAQ12857 509 aa17.77■□□□□ 0.43
HDHD3-201ENST00000238379 IFFO2Q5TF58 517 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms