RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 METTL24Q5JXM2 366 aa14.2□□□□□ -0.14
NUP88-201ENST00000225696 PROSER2Q86WR7 435 aaPredicted RBP14.2□□□□□ -0.14
NUP88-201ENST00000225696 OXER1Q8TDS5 423 aa14.2□□□□□ -0.14
NUP88-201ENST00000225696 ZKSCAN3Q9BRR0 538 aa14.2□□□□□ -0.14
NUP88-201ENST00000225696 LZTFL1Q9NQ48 299 aa14.2□□□□□ -0.14
NUP88-201ENST00000225696 CDKL5O76039 1030 aa14.2□□□□□ -0.14
NUP88-201ENST00000225696 ABL1P00519 1130 aa14.2□□□□□ -0.14
NUP88-201ENST00000225696 IFIT5Q13325 482 aaKnown RBP14.2□□□□□ -0.14
NUP88-201ENST00000225696 TCIRG1Q13488 830 aa14.2□□□□□ -0.14
NUP88-201ENST00000225696 MORC3Q14149 939 aa14.2□□□□□ -0.14
NUP88-201ENST00000225696 GPR161Q8N6U8 529 aaKnown RBP14.2□□□□□ -0.14
NUP88-201ENST00000225696 CPLX3Q8WVH0 158 aa14.2□□□□□ -0.14
NUP88-201ENST00000225696 GREM2Q9H772 168 aa14.2□□□□□ -0.14
NUP88-201ENST00000225696 EPB41L4AQ9HCS5 686 aaPredicted RBP14.2□□□□□ -0.14
NUP88-201ENST00000225696 CALCOCO1Q9P1Z2 691 aa14.2□□□□□ -0.14
NUP88-201ENST00000225696 ALS2Q96Q42 1657 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 H3BQF6 201 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 SNAP23O00161 211 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 TULP2O00295 520 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 COBLO75128 1261 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 PHKA1P46020 1223 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 NR1I3Q14994 352 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 RAD9BQ6WBX8 426 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 APTXQ7Z2E3 356 aaKnown RBP14.19□□□□□ -0.14
NUP88-201ENST00000225696 DIS3L2Q8IYB7 885 aaKnown RBP14.19□□□□□ -0.14
NUP88-201ENST00000225696 CCDC12Q8WUD4 166 aaPredicted RBP14.19□□□□□ -0.14
NUP88-201ENST00000225696 A0A087X0B3 334 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 TCRBV5S4A2TA0A5A2 114 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 FAM205CA6NFA0 338 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 VGLL3A8MV65 326 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 CSF1RP07333 972 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 PDE6AP16499 860 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 PTPREP23469 700 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 GPTP24298 496 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 TRIM29Q14134 588 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 NT5DC1Q5TFE4 455 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 LDHAL6AQ6ZMR3 332 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 SHISA4Q96DD7 197 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 STRBPQ96SI9 672 aaKnown RBP14.19□□□□□ -0.14
NUP88-201ENST00000225696 STRCQ7RTU9 1775 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 PKD1L3Q7Z443 1732 aa14.19□□□□□ -0.14
NUP88-201ENST00000225696 KCPQ6ZWJ8 1503 aa14.18□□□□□ -0.14
NUP88-201ENST00000225696 MYH7P12883 1935 aa14.18□□□□□ -0.14
NUP88-201ENST00000225696 ACTN4O43707 911 aaKnown RBP14.18□□□□□ -0.14
NUP88-201ENST00000225696 MMP1P03956 469 aa14.18□□□□□ -0.14
NUP88-201ENST00000225696 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
NUP88-201ENST00000225696 ITGA6P23229 1130 aa14.18□□□□□ -0.14
NUP88-201ENST00000225696 STX17P56962 302 aa14.18□□□□□ -0.14
NUP88-201ENST00000225696 FAM193AP78312 1265 aa14.18□□□□□ -0.14
NUP88-201ENST00000225696 MAPK8IP2Q13387 824 aaPredicted RBP14.18□□□□□ -0.14
NUP88-201ENST00000225696 SGMS1Q86VZ5 419 aa14.18□□□□□ -0.14
NUP88-201ENST00000225696 SMYD4Q8IYR2 804 aaPredicted RBP14.18□□□□□ -0.14
NUP88-201ENST00000225696 ENOX1Q8TC92 643 aaKnown RBP14.18□□□□□ -0.14
NUP88-201ENST00000225696 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.18□□□□□ -0.14
NUP88-201ENST00000225696 RAI14Q9P0K7 980 aa14.18□□□□□ -0.14
NUP88-201ENST00000225696 PUF60Q9UHX1 559 aaKnown RBP14.18□□□□□ -0.14
NUP88-201ENST00000225696 IFIT3O14879 490 aaKnown RBP14.17□□□□□ -0.14
NUP88-201ENST00000225696 PRKAB2O43741 272 aa14.17□□□□□ -0.14
NUP88-201ENST00000225696 HSPA2P54652 639 aa14.17□□□□□ -0.14
NUP88-201ENST00000225696 SSRP1Q08945 709 aaKnown RBP14.17□□□□□ -0.14
NUP88-201ENST00000225696 RBL2Q08999 1139 aa14.17□□□□□ -0.14
NUP88-201ENST00000225696 CPLX2Q6PUV4 134 aaKnown RBP14.17□□□□□ -0.14
NUP88-201ENST00000225696 HELBQ8NG08 1087 aaPredicted RBP14.17□□□□□ -0.14
NUP88-201ENST00000225696 TTLL11Q8NHH1 800 aa14.17□□□□□ -0.14
NUP88-201ENST00000225696 SUGCTQ9HAC7 445 aa14.17□□□□□ -0.14
NUP88-201ENST00000225696 ARFGAP3Q9NP61 516 aa14.17□□□□□ -0.14
NUP88-201ENST00000225696 SLC12A7Q9Y666 1083 aa14.17□□□□□ -0.14
NUP88-201ENST00000225696 SMIM22K7EJ46 135 aa14.17□□□□□ -0.14
NUP88-201ENST00000225696 FMNL1O95466 1100 aaPredicted RBP14.17□□□□□ -0.14
NUP88-201ENST00000225696 HLFQ16534 295 aa14.17□□□□□ -0.14
NUP88-201ENST00000225696 LONRF2Q1L5Z9 754 aa14.17□□□□□ -0.14
NUP88-201ENST00000225696 KLHL10Q6JEL2 608 aa14.17□□□□□ -0.14
NUP88-201ENST00000225696 VGLL2Q8N8G2 317 aa14.17□□□□□ -0.14
NUP88-201ENST00000225696 TMEM87BQ96K49 555 aa14.17□□□□□ -0.14
NUP88-201ENST00000225696 CSRNP2Q9H175 543 aa14.17□□□□□ -0.14
NUP88-201ENST00000225696 MYO1BO43795 1136 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 TPM1P09493 284 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 RAD51AP2Q09MP3 1159 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 EARS2Q5JPH6 523 aaKnown RBP14.16□□□□□ -0.14
NUP88-201ENST00000225696 RRP12Q5JTH9 1297 aaKnown RBP14.16□□□□□ -0.14
NUP88-201ENST00000225696 WWC2Q6AWC2 1192 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 CREBRFQ8IUR6 639 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 MLKLQ8NB16 471 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 RABGGTAQ92696 567 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 EPSTI1Q96J88 318 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 PNKPQ96T60 521 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 ANKZF1Q9H8Y5 726 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 ADGRG1Q9Y653 693 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 A0A1B0GTH6 734 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 WNT7AO00755 349 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 PCCAP05165 728 aaPredicted RBP14.16□□□□□ -0.14
NUP88-201ENST00000225696 TXLNAP40222 546 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 AFMP43652 599 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 UBE3CQ15386 1083 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 NUTM2AQ8IVF1 878 aaPredicted RBP14.16□□□□□ -0.14
NUP88-201ENST00000225696 IFNL3Q8IZI9 196 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 ZCRB1Q8TBF4 217 aaKnown RBP14.16□□□□□ -0.14
NUP88-201ENST00000225696 ARMT1Q9H993 441 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 MST1RQ04912 1400 aa14.16□□□□□ -0.14
NUP88-201ENST00000225696 ATP8B1O43520 1251 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms