RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 CCDC194A0A1B0GVG4 234 aa17.07■□□□□ 0.32
UBE2D4-201ENST00000222402 USP17L12C9JPN9 530 aa17.07■□□□□ 0.32
UBE2D4-201ENST00000222402 USP17L21D6R901 530 aa17.07■□□□□ 0.32
UBE2D4-201ENST00000222402 STAMQ92783 540 aa17.07■□□□□ 0.32
UBE2D4-201ENST00000222402 NGLY1Q96IV0 654 aa17.07■□□□□ 0.32
UBE2D4-201ENST00000222402 ZNF215Q9UL58 517 aaPredicted RBP17.07■□□□□ 0.32
UBE2D4-201ENST00000222402 FMNL1O95466 1100 aaPredicted RBP17.07■□□□□ 0.32
UBE2D4-201ENST00000222402 LONRF3Q496Y0 759 aa17.07■□□□□ 0.32
UBE2D4-201ENST00000222402 ZNF444Q8N0Y2 327 aaPredicted RBP17.07■□□□□ 0.32
UBE2D4-201ENST00000222402 ABCC12Q96J65 1359 aa17.07■□□□□ 0.32
UBE2D4-201ENST00000222402 KIF5BP33176 963 aa17.07■□□□□ 0.32
UBE2D4-201ENST00000222402 DCCP43146 1447 aa17.07■□□□□ 0.32
UBE2D4-201ENST00000222402 CYP2D7A0A087X1C5 515 aa17.06■□□□□ 0.32
UBE2D4-201ENST00000222402 USP27XA6NNY8 438 aa17.06■□□□□ 0.32
UBE2D4-201ENST00000222402 WDR19Q8NEZ3 1342 aa17.06■□□□□ 0.32
UBE2D4-201ENST00000222402 IGSF3O75054 1194 aa17.06■□□□□ 0.32
UBE2D4-201ENST00000222402 CASQ1P31415 396 aa17.06■□□□□ 0.32
UBE2D4-201ENST00000222402 MCM7P33993 719 aa17.06■□□□□ 0.32
UBE2D4-201ENST00000222402 ARID4AP29374 1257 aaPredicted RBP17.06■□□□□ 0.32
UBE2D4-201ENST00000222402 DYNLL1P63167 89 aaKnown RBP17.06■□□□□ 0.32
UBE2D4-201ENST00000222402 ARHGAP29Q52LW3 1261 aa17.06■□□□□ 0.32
UBE2D4-201ENST00000222402 FAM47AQ5JRC9 791 aa17.06■□□□□ 0.32
UBE2D4-201ENST00000222402 TEX35Q5T0J7 233 aa17.06■□□□□ 0.32
UBE2D4-201ENST00000222402 ILDR1Q86SU0 546 aaPredicted RBP17.06■□□□□ 0.32
UBE2D4-201ENST00000222402 CDCA7Q9BWT1 371 aaPredicted RBP17.06■□□□□ 0.32
UBE2D4-201ENST00000222402 JCADQ9P266 1359 aa17.06■□□□□ 0.32
UBE2D4-201ENST00000222402 UBN2Q6ZU65 1347 aa17.06■□□□□ 0.32
UBE2D4-201ENST00000222402 GSG1L2A8MUP6 293 aa17.05■□□□□ 0.32
UBE2D4-201ENST00000222402 GOLGA8FQ08AF8 430 aa17.05■□□□□ 0.32
UBE2D4-201ENST00000222402 GOLGA8DPQ0D2H9 430 aa17.05■□□□□ 0.32
UBE2D4-201ENST00000222402 ELF2Q15723 593 aa17.05■□□□□ 0.32
UBE2D4-201ENST00000222402 GRAMD1CQ8IYS0 662 aa17.05■□□□□ 0.32
UBE2D4-201ENST00000222402 BMP15O95972 392 aa17.05■□□□□ 0.32
UBE2D4-201ENST00000222402 MMP1P03956 469 aa17.05■□□□□ 0.32
UBE2D4-201ENST00000222402 CALM1P0DP23 149 aa17.05■□□□□ 0.32
UBE2D4-201ENST00000222402 CALM2P0DP24 149 aa17.05■□□□□ 0.32
UBE2D4-201ENST00000222402 CALM3P0DP25 149 aa17.05■□□□□ 0.32
UBE2D4-201ENST00000222402 TIGD1Q96MW7 591 aa17.05■□□□□ 0.32
UBE2D4-201ENST00000222402 MAGEC2Q9UBF1 373 aaPredicted RBP17.05■□□□□ 0.32
UBE2D4-201ENST00000222402 RRAGBQ5VZM2 374 aa17.05■□□□□ 0.32
UBE2D4-201ENST00000222402 UBE2Q2LH0YL09 131 aa17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 MLKLQ8NB16 471 aa17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 IGDCC4Q8TDY8 1250 aa17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 PKNOX2Q96KN3 472 aa17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 N4BP3O15049 544 aa17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 HIBADHP31937 336 aaKnown RBP17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 STIM1Q13586 685 aa17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 SHC4Q6S5L8 630 aa17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 BAG1Q99933 345 aaPredicted RBP17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 ZSWIM4Q9H7M6 989 aa17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 PCDHB6Q9Y5E3 794 aa17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 GUCY1A2P33402 732 aa17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 NAA30Q147X3 362 aaPredicted RBP17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 SOGA3Q5TF21 947 aa17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 PIK3AP1Q6ZUJ8 805 aa17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 ERO1AQ96HE7 468 aa17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 ZSCAN10Q96SZ4 725 aaPredicted RBP17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 EPB41L4AQ9HCS5 686 aaPredicted RBP17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 ZHX1Q9UKY1 873 aaPredicted RBP17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 COL5A2P05997 1499 aaPredicted RBP17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 KIF1AQ12756 1690 aa17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 KARSQ15046 597 aaKnown RBP17.04■□□□□ 0.32
UBE2D4-201ENST00000222402 SALL1Q9NSC2 1324 aa17.03■□□□□ 0.32
UBE2D4-201ENST00000222402 TMCO3Q6UWJ1 677 aa17.03■□□□□ 0.32
UBE2D4-201ENST00000222402 CRACR2BQ8N4Y2 399 aaPredicted RBP17.03■□□□□ 0.32
UBE2D4-201ENST00000222402 TMX4Q9H1E5 349 aaPredicted RBP17.03■□□□□ 0.32
UBE2D4-201ENST00000222402 RBM28Q9NW13 759 aaKnown RBP17.03■□□□□ 0.32
UBE2D4-201ENST00000222402 IKBKBO14920 756 aa17.03■□□□□ 0.32
UBE2D4-201ENST00000222402 SGMS1Q86VZ5 419 aa17.03■□□□□ 0.32
UBE2D4-201ENST00000222402 NUP88Q99567 741 aaPredicted RBP17.03■□□□□ 0.32
UBE2D4-201ENST00000222402 VAT1LQ9HCJ6 419 aa17.03■□□□□ 0.32
UBE2D4-201ENST00000222402 UBA7P41226 1012 aa17.03■□□□□ 0.32
UBE2D4-201ENST00000222402 ATP2B2Q01814 1243 aa17.03■□□□□ 0.32
UBE2D4-201ENST00000222402 ALX1Q15699 326 aa17.03■□□□□ 0.32
UBE2D4-201ENST00000222402 TPTE2Q6XPS3 522 aa17.03■□□□□ 0.32
UBE2D4-201ENST00000222402 CCDC12Q8WUD4 166 aaPredicted RBP17.03■□□□□ 0.32
UBE2D4-201ENST00000222402 FAM98CQ17RN3 349 aaKnown RBP17.02■□□□□ 0.32
UBE2D4-201ENST00000222402 ERFEQ4G0M1 354 aa17.02■□□□□ 0.32
UBE2D4-201ENST00000222402 TTC38Q5R3I4 469 aa17.02■□□□□ 0.32
UBE2D4-201ENST00000222402 AXDND1Q5T1B0 1012 aaPredicted RBP17.02■□□□□ 0.32
UBE2D4-201ENST00000222402 ZNF397Q8NF99 534 aaPredicted RBP17.02■□□□□ 0.32
UBE2D4-201ENST00000222402 AK7Q96M32 723 aa17.02■□□□□ 0.32
UBE2D4-201ENST00000222402 FOXP1Q9H334 677 aaPredicted RBP17.02■□□□□ 0.32
UBE2D4-201ENST00000222402 GNPATO15228 680 aa17.02■□□□□ 0.32
UBE2D4-201ENST00000222402 ADKP55263 362 aaKnown RBP17.02■□□□□ 0.32
UBE2D4-201ENST00000222402 EVCP57679 992 aa17.02■□□□□ 0.32
UBE2D4-201ENST00000222402 RPS8P62241 208 aaKnown RBP17.02■□□□□ 0.32
UBE2D4-201ENST00000222402 ZNF34Q8IZ26 560 aa17.02■□□□□ 0.32
UBE2D4-201ENST00000222402 CSRNP2Q9H175 543 aa17.02■□□□□ 0.32
UBE2D4-201ENST00000222402 SPTY2D1Q68D10 685 aaPredicted RBP17.02■□□□□ 0.31
UBE2D4-201ENST00000222402 CAMTA1Q9Y6Y1 1673 aa17.02■□□□□ 0.31
UBE2D4-201ENST00000222402 MROH7-TTC4A0A0A0MT08 1334 aa17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 TSPY3P0CV98 308 aa17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 TSPY8P0CW00 308 aa17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 RESP18Q5W5W9 173 aa17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 HEATR3Q7Z4Q2 680 aa17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 FOXN1O15353 648 aa17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 KIF5CO60282 957 aa17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 KIF4BQ2VIQ3 1234 aa17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 IQUBQ8NA54 791 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms