RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 MAGEB6P1A0A0J9YX57 407 aa25.65■■□□□ 1.7
CCDC9-201ENST00000221922 TNNT1P13805 278 aa25.65■■□□□ 1.7
CCDC9-201ENST00000221922 ADRA2BP18089 450 aa25.65■■□□□ 1.7
CCDC9-201ENST00000221922 RXRAP19793 462 aa25.65■■□□□ 1.7
CCDC9-201ENST00000221922 KRT40Q6A162 431 aa25.65■■□□□ 1.7
CCDC9-201ENST00000221922 WASF1Q92558 559 aa25.65■■□□□ 1.7
CCDC9-201ENST00000221922 GJB4Q9NTQ9 266 aa25.65■■□□□ 1.7
CCDC9-201ENST00000221922 PAXBP1Q9Y5B6 917 aa25.65■■□□□ 1.7
CCDC9-201ENST00000221922 NDUFA8P51970 172 aa25.65■■□□□ 1.7
CCDC9-201ENST00000221922 TMTC2Q8N394 836 aa25.65■■□□□ 1.7
CCDC9-201ENST00000221922 TACC3Q9Y6A5 838 aa25.65■■□□□ 1.7
CCDC9-201ENST00000221922 A0A1B0GVL5 298 aa25.64■■□□□ 1.7
CCDC9-201ENST00000221922 ERICH2A1L162 156 aa25.64■■□□□ 1.7
CCDC9-201ENST00000221922 RCAN1P53805 252 aa25.64■■□□□ 1.7
CCDC9-201ENST00000221922 SYCP1Q15431 976 aa25.64■■□□□ 1.7
CCDC9-201ENST00000221922 FAM196AQ6ZSG2 479 aa25.64■■□□□ 1.7
CCDC9-201ENST00000221922 BPIFA3Q9BQP9 254 aa25.64■■□□□ 1.7
CCDC9-201ENST00000221922 SDF4Q9BRK5 362 aa25.64■■□□□ 1.7
CCDC9-201ENST00000221922 RIOK1Q9BRS2 568 aaKnown RBP25.64■■□□□ 1.7
CCDC9-201ENST00000221922 INCENPQ9NQS7 918 aa25.64■■□□□ 1.7
CCDC9-201ENST00000221922 MAST2Q6P0Q8 1798 aa25.64■■□□□ 1.69
CCDC9-201ENST00000221922 A0A087WWV3 80 aa25.64■■□□□ 1.69
CCDC9-201ENST00000221922 SSRP1Q08945 709 aaKnown RBP25.64■■□□□ 1.69
CCDC9-201ENST00000221922 GNL2Q13823 731 aaKnown RBP25.64■■□□□ 1.69
CCDC9-201ENST00000221922 PHKBQ93100 1093 aa25.64■■□□□ 1.69
CCDC9-201ENST00000221922 FAM217BQ9NTX9 383 aaPredicted RBP25.64■■□□□ 1.69
CCDC9-201ENST00000221922 KIAA1468Q9P260 1216 aa25.64■■□□□ 1.69
CCDC9-201ENST00000221922 ANAPC4Q9UJX5 808 aa25.64■■□□□ 1.69
CCDC9-201ENST00000221922 UBR3Q6ZT12 1888 aa25.63■■□□□ 1.69
CCDC9-201ENST00000221922 WTAPQ15007 396 aa25.63■■□□□ 1.69
CCDC9-201ENST00000221922 AOPEPQ8N6M6 819 aa25.63■■□□□ 1.69
CCDC9-201ENST00000221922 IFNAR1P17181 557 aa25.62■■□□□ 1.69
CCDC9-201ENST00000221922 SLC39A14Q15043 492 aa25.62■■□□□ 1.69
CCDC9-201ENST00000221922 TPD52L1Q16890 204 aaPredicted RBP25.62■■□□□ 1.69
CCDC9-201ENST00000221922 JMYQ8N9B5 988 aa25.62■■□□□ 1.69
CCDC9-201ENST00000221922 AIFM3Q96NN9 605 aa25.62■■□□□ 1.69
CCDC9-201ENST00000221922 TOMM22Q9NS69 142 aa25.62■■□□□ 1.69
CCDC9-201ENST00000221922 FMNL1O95466 1100 aaPredicted RBP25.62■■□□□ 1.69
CCDC9-201ENST00000221922 KLRK1P26718 216 aa25.62■■□□□ 1.69
CCDC9-201ENST00000221922 HIBADHP31937 336 aaKnown RBP25.62■■□□□ 1.69
CCDC9-201ENST00000221922 PPARAQ07869 468 aa25.62■■□□□ 1.69
CCDC9-201ENST00000221922 RRP12Q5JTH9 1297 aaKnown RBP25.62■■□□□ 1.69
CCDC9-201ENST00000221922 TMED8Q6PL24 325 aaPredicted RBP25.62■■□□□ 1.69
CCDC9-201ENST00000221922 SMAP1Q8IYB5 467 aaPredicted RBP25.62■■□□□ 1.69
CCDC9-201ENST00000221922 CCDC24Q8N4L8 307 aa25.62■■□□□ 1.69
CCDC9-201ENST00000221922 ARID3AQ99856 593 aa25.62■■□□□ 1.69
CCDC9-201ENST00000221922 RANBP6O60518 1105 aaKnown RBP25.61■■□□□ 1.69
CCDC9-201ENST00000221922 CMA1P23946 247 aa25.61■■□□□ 1.69
CCDC9-201ENST00000221922 ARID5BQ14865 1188 aa25.61■■□□□ 1.69
CCDC9-201ENST00000221922 NFIXQ14938 502 aa25.61■■□□□ 1.69
CCDC9-201ENST00000221922 ERCC4Q92889 916 aaPredicted RBP25.61■■□□□ 1.69
CCDC9-201ENST00000221922 LRRC4BQ9NT99 713 aa25.61■■□□□ 1.69
CCDC9-201ENST00000221922 CCDC196A0A1B0GTZ2 297 aa25.6■■□□□ 1.69
CCDC9-201ENST00000221922 U2AF2P26368 475 aaKnown RBP eCLIP25.6■■□□□ 1.69
CCDC9-201ENST00000221922 PDCL2Q8N4E4 241 aa25.6■■□□□ 1.69
CCDC9-201ENST00000221922 MYL10Q9BUA6 226 aa25.6■■□□□ 1.69
CCDC9-201ENST00000221922 KCND1Q9NSA2 647 aa25.6■■□□□ 1.69
CCDC9-201ENST00000221922 IRS2Q9Y4H2 1338 aa25.6■■□□□ 1.69
CCDC9-201ENST00000221922 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.6■■□□□ 1.69
CCDC9-201ENST00000221922 PPP6R2O75170 966 aa25.6■■□□□ 1.69
CCDC9-201ENST00000221922 CCZ1BP86790 482 aa25.6■■□□□ 1.69
CCDC9-201ENST00000221922 CCZ1P86791 482 aaPredicted RBP25.6■■□□□ 1.69
CCDC9-201ENST00000221922 RTN1Q16799 776 aa25.6■■□□□ 1.69
CCDC9-201ENST00000221922 TRIM22Q8IYM9 498 aa25.6■■□□□ 1.69
CCDC9-201ENST00000221922 ZNF384Q8TF68 577 aa25.6■■□□□ 1.69
CCDC9-201ENST00000221922 BRIP1Q9BX63 1249 aa25.6■■□□□ 1.69
CCDC9-201ENST00000221922 SLC26A6Q9BXS9 759 aa25.6■■□□□ 1.69
CCDC9-201ENST00000221922 NPHP1O15259 732 aa25.59■■□□□ 1.69
CCDC9-201ENST00000221922 SKILP12757 684 aa25.59■■□□□ 1.69
CCDC9-201ENST00000221922 AXDND1Q5T1B0 1012 aaPredicted RBP25.59■■□□□ 1.69
CCDC9-201ENST00000221922 ZRSR1Q15695 479 aaKnown RBP25.59■■□□□ 1.69
CCDC9-201ENST00000221922 PPP4R3BQ5MIZ7 849 aa25.59■■□□□ 1.69
CCDC9-201ENST00000221922 CNBD1Q8NA66 436 aa25.59■■□□□ 1.69
CCDC9-201ENST00000221922 SDR42E1Q8WUS8 393 aa25.59■■□□□ 1.69
CCDC9-201ENST00000221922 OSBPL5Q9H0X9 879 aaPredicted RBP25.59■■□□□ 1.69
CCDC9-201ENST00000221922 GSDMDP57764 484 aa25.58■■□□□ 1.69
CCDC9-201ENST00000221922 NYAP1Q6ZVC0 841 aa25.58■■□□□ 1.69
CCDC9-201ENST00000221922 NSUN4Q96CB9 384 aaKnown RBP25.58■■□□□ 1.69
CCDC9-201ENST00000221922 UBAC1Q9BSL1 405 aa25.58■■□□□ 1.69
CCDC9-201ENST00000221922 IMPACTQ9P2X3 320 aa25.58■■□□□ 1.69
CCDC9-201ENST00000221922 KIAA1551Q9HCM1 1747 aa25.58■■□□□ 1.69
CCDC9-201ENST00000221922 GRAPQ13588 217 aa25.57■■□□□ 1.68
CCDC9-201ENST00000221922 DPCR1Q3MIW9 517 aa25.57■■□□□ 1.68
CCDC9-201ENST00000221922 NBPF11Q86T75 865 aa25.57■■□□□ 1.68
CCDC9-201ENST00000221922 GRAPLQ8TC17 118 aaPredicted RBP25.57■■□□□ 1.68
CCDC9-201ENST00000221922 ESR2Q92731 530 aa25.57■■□□□ 1.68
CCDC9-201ENST00000221922 CCDC88AQ3V6T2 1871 aa25.57■■□□□ 1.68
CCDC9-201ENST00000221922 ZNF202O95125 648 aa25.57■■□□□ 1.68
CCDC9-201ENST00000221922 NCBP1Q09161 790 aaKnown RBP25.57■■□□□ 1.68
CCDC9-201ENST00000221922 PPP2R5BQ15173 497 aa25.57■■□□□ 1.68
CCDC9-201ENST00000221922 SAFBQ15424 915 aaKnown RBP eCLIP25.57■■□□□ 1.68
CCDC9-201ENST00000221922 CEP135Q66GS9 1140 aa25.57■■□□□ 1.68
CCDC9-201ENST00000221922 FILIP1Q7Z7B0 1213 aa25.57■■□□□ 1.68
CCDC9-201ENST00000221922 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.57■■□□□ 1.68
CCDC9-201ENST00000221922 TFCP2L1Q9NZI6 479 aa25.57■■□□□ 1.68
CCDC9-201ENST00000221922 DUOX1Q9NRD9 1551 aa25.56■■□□□ 1.68
CCDC9-201ENST00000221922 CCDC112Q8NEF3 446 aa25.56■■□□□ 1.68
CCDC9-201ENST00000221922 TIGD1Q96MW7 591 aa25.56■■□□□ 1.68
CCDC9-201ENST00000221922 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.56■■□□□ 1.68
CCDC9-201ENST00000221922 IGSF3O75054 1194 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms