RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 ARPP21Q9UBL0 812 aaPredicted RBP17.78■□□□□ 0.44
PAF1-201ENST00000221265 BCS1LQ9Y276 419 aa17.78■□□□□ 0.44
PAF1-201ENST00000221265 KLF18A0A0U1RQI7 1052 aa17.77■□□□□ 0.44
PAF1-201ENST00000221265 JAK2O60674 1132 aa17.77■□□□□ 0.44
PAF1-201ENST00000221265 RAD17O75943 681 aa17.77■□□□□ 0.44
PAF1-201ENST00000221265 EVCP57679 992 aa17.77■□□□□ 0.44
PAF1-201ENST00000221265 FOXD4L6Q3SYB3 417 aaPredicted RBP17.77■□□□□ 0.44
PAF1-201ENST00000221265 C12orf60Q5U649 245 aa17.77■□□□□ 0.44
PAF1-201ENST00000221265 FOXD4L3Q6VB84 417 aaPredicted RBP17.77■□□□□ 0.44
PAF1-201ENST00000221265 ILDR2Q71H61 639 aa17.77■□□□□ 0.44
PAF1-201ENST00000221265 ANGEL1Q9UNK9 670 aaKnown RBP17.77■□□□□ 0.44
PAF1-201ENST00000221265 FLT1P17948 1338 aa17.77■□□□□ 0.43
PAF1-201ENST00000221265 PPFIA3O75145 1194 aa17.76■□□□□ 0.43
PAF1-201ENST00000221265 PLCD1P51178 756 aa17.76■□□□□ 0.43
PAF1-201ENST00000221265 APOBEC3HQ6NTF7 200 aaKnown RBP17.76■□□□□ 0.43
PAF1-201ENST00000221265 TEKT1Q969V4 418 aa17.76■□□□□ 0.43
PAF1-201ENST00000221265 DYNLL2Q96FJ2 89 aa17.76■□□□□ 0.43
PAF1-201ENST00000221265 RBSNQ9H1K0 784 aa17.76■□□□□ 0.43
PAF1-201ENST00000221265 LY9Q9HBG7 655 aa17.76■□□□□ 0.43
PAF1-201ENST00000221265 HPS5Q9UPZ3 1129 aa17.76■□□□□ 0.43
PAF1-201ENST00000221265 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.76■□□□□ 0.43
PAF1-201ENST00000221265 NFKBIEO00221 500 aa17.76■□□□□ 0.43
PAF1-201ENST00000221265 FGRP09769 529 aa17.76■□□□□ 0.43
PAF1-201ENST00000221265 PLCG2P16885 1265 aa17.76■□□□□ 0.43
PAF1-201ENST00000221265 SYT1P21579 422 aa17.76■□□□□ 0.43
PAF1-201ENST00000221265 CRKP46108 304 aa17.76■□□□□ 0.43
PAF1-201ENST00000221265 FKBP1AP62942 108 aaKnown RBP17.76■□□□□ 0.43
PAF1-201ENST00000221265 TMEM67Q5HYA8 995 aa17.76■□□□□ 0.43
PAF1-201ENST00000221265 SOGA3Q5TF21 947 aa17.76■□□□□ 0.43
PAF1-201ENST00000221265 HHIPL2Q6UWX4 724 aa17.76■□□□□ 0.43
PAF1-201ENST00000221265 ZNF274Q96GC6 653 aaPredicted RBP17.76■□□□□ 0.43
PAF1-201ENST00000221265 IFIT3O14879 490 aaKnown RBP17.75■□□□□ 0.43
PAF1-201ENST00000221265 CTDNEP1O95476 244 aa17.75■□□□□ 0.43
PAF1-201ENST00000221265 ZSCAN22P10073 491 aaPredicted RBP17.75■□□□□ 0.43
PAF1-201ENST00000221265 TMEM87BQ96K49 555 aa17.75■□□□□ 0.43
PAF1-201ENST00000221265 PPP1R9BQ96SB3 815 aa17.75■□□□□ 0.43
PAF1-201ENST00000221265 GDPD2Q9HCC8 539 aa17.75■□□□□ 0.43
PAF1-201ENST00000221265 DDX4Q9NQI0 724 aaKnown RBP17.75■□□□□ 0.43
PAF1-201ENST00000221265 GOLGA8BA8MQT2 603 aa17.75■□□□□ 0.43
PAF1-201ENST00000221265 STX6O43752 255 aa17.75■□□□□ 0.43
PAF1-201ENST00000221265 RANBP6O60518 1105 aaKnown RBP17.75■□□□□ 0.43
PAF1-201ENST00000221265 RXRAP19793 462 aa17.75■□□□□ 0.43
PAF1-201ENST00000221265 IARSP41252 1262 aaKnown RBP17.75■□□□□ 0.43
PAF1-201ENST00000221265 CCDC173Q0VFZ6 552 aa17.75■□□□□ 0.43
PAF1-201ENST00000221265 CDC42EP5Q6NZY7 148 aa17.75■□□□□ 0.43
PAF1-201ENST00000221265 USP48Q86UV5 1035 aa17.75■□□□□ 0.43
PAF1-201ENST00000221265 CERS3Q8IU89 383 aa17.75■□□□□ 0.43
PAF1-201ENST00000221265 USP40Q9NVE5 1235 aa17.75■□□□□ 0.43
PAF1-201ENST00000221265 PSMD14O00487 310 aa17.74■□□□□ 0.43
PAF1-201ENST00000221265 GADD45BO75293 160 aaPredicted RBP17.74■□□□□ 0.43
PAF1-201ENST00000221265 WDHD1O75717 1129 aaPredicted RBP17.74■□□□□ 0.43
PAF1-201ENST00000221265 PICALMQ13492 652 aa17.74■□□□□ 0.43
PAF1-201ENST00000221265 LRSAM1Q6UWE0 723 aa17.74■□□□□ 0.43
PAF1-201ENST00000221265 SLC44A5Q8NCS7 719 aa17.74■□□□□ 0.43
PAF1-201ENST00000221265 ESR2Q92731 530 aa17.74■□□□□ 0.43
PAF1-201ENST00000221265 TAOK3Q9H2K8 898 aa17.74■□□□□ 0.43
PAF1-201ENST00000221265 ARFGEF1Q9Y6D6 1849 aa17.74■□□□□ 0.43
PAF1-201ENST00000221265 TCHHQ07283 1943 aa17.74■□□□□ 0.43
PAF1-201ENST00000221265 SYCE3A1L190 88 aa17.73■□□□□ 0.43
PAF1-201ENST00000221265 FAM47AQ5JRC9 791 aa17.73■□□□□ 0.43
PAF1-201ENST00000221265 ZDHHC15Q96MV8 337 aa17.73■□□□□ 0.43
PAF1-201ENST00000221265 MYL10Q9BUA6 226 aa17.73■□□□□ 0.43
PAF1-201ENST00000221265 POLR3DP05423 398 aaPredicted RBP17.73■□□□□ 0.43
PAF1-201ENST00000221265 RBM5P52756 815 aaKnown RBP eCLIP17.73■□□□□ 0.43
PAF1-201ENST00000221265 APOA5Q6Q788 366 aa17.73■□□□□ 0.43
PAF1-201ENST00000221265 NSUN7Q8NE18 718 aaKnown RBP17.73■□□□□ 0.43
PAF1-201ENST00000221265 DDX11Q96FC9 970 aa17.73■□□□□ 0.43
PAF1-201ENST00000221265 SPON1Q9HCB6 807 aa17.73■□□□□ 0.43
PAF1-201ENST00000221265 ZBTB12Q9Y330 459 aaPredicted RBP17.73■□□□□ 0.43
PAF1-201ENST00000221265 ORC4O43929 436 aa17.72■□□□□ 0.43
PAF1-201ENST00000221265 NMT2O60551 498 aa17.72■□□□□ 0.43
PAF1-201ENST00000221265 CACNB3P54284 484 aa17.72■□□□□ 0.43
PAF1-201ENST00000221265 RASSF7Q02833 373 aa17.72■□□□□ 0.43
PAF1-201ENST00000221265 NFIAQ12857 509 aa17.72■□□□□ 0.43
PAF1-201ENST00000221265 NIM1KQ8IY84 436 aa17.72■□□□□ 0.43
PAF1-201ENST00000221265 TMEM87AQ8NBN3 555 aa17.72■□□□□ 0.43
PAF1-201ENST00000221265 TRIM44Q96DX7 344 aaPredicted RBP17.72■□□□□ 0.43
PAF1-201ENST00000221265 ZNRF3Q9ULT6 936 aa17.72■□□□□ 0.43
PAF1-201ENST00000221265 ROBO3Q96MS0 1386 aa17.72■□□□□ 0.43
PAF1-201ENST00000221265 LIFRP42702 1097 aa17.71■□□□□ 0.43
PAF1-201ENST00000221265 PRELPP51888 382 aa17.71■□□□□ 0.43
PAF1-201ENST00000221265 RSBN1LQ6PCB5 846 aaPredicted RBP17.71■□□□□ 0.43
PAF1-201ENST00000221265 NFXL1Q6ZNB6 911 aa17.71■□□□□ 0.43
PAF1-201ENST00000221265 SGMS1Q86VZ5 419 aa17.71■□□□□ 0.43
PAF1-201ENST00000221265 CCDC144CPQ8IYA2 1237 aa17.71■□□□□ 0.43
PAF1-201ENST00000221265 TNKSO95271 1327 aa17.71■□□□□ 0.43
PAF1-201ENST00000221265 ESPNB1AK53 854 aa17.71■□□□□ 0.43
PAF1-201ENST00000221265 F13A1P00488 732 aa17.71■□□□□ 0.43
PAF1-201ENST00000221265 SLC3A2P08195 630 aaKnown RBP17.71■□□□□ 0.43
PAF1-201ENST00000221265 VIL1P09327 827 aaKnown RBP17.71■□□□□ 0.43
PAF1-201ENST00000221265 PCP11498 1178 aaKnown RBP17.71■□□□□ 0.43
PAF1-201ENST00000221265 CLCN1P35523 988 aa17.71■□□□□ 0.43
PAF1-201ENST00000221265 PDE4BQ07343 736 aa17.71■□□□□ 0.43
PAF1-201ENST00000221265 SEC23AQ15436 765 aa17.71■□□□□ 0.43
PAF1-201ENST00000221265 MICU3Q86XE3 530 aa17.71■□□□□ 0.43
PAF1-201ENST00000221265 ENAHQ8N8S7 591 aaPredicted RBP17.71■□□□□ 0.43
PAF1-201ENST00000221265 SMARCC2Q8TAQ2 1214 aa17.71■□□□□ 0.43
PAF1-201ENST00000221265 UBAC1Q9BSL1 405 aa17.71■□□□□ 0.43
PAF1-201ENST00000221265 VPS33BQ9H267 617 aa17.71■□□□□ 0.43
PAF1-201ENST00000221265 PTPDC1A2A3K4 754 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms