RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 STX1AQ16623 288 aa12□□□□□ -0.49
VPS18-201ENST00000220509 RTN1Q16799 776 aa12□□□□□ -0.49
VPS18-201ENST00000220509 SOGA3Q5TF21 947 aa12□□□□□ -0.49
VPS18-201ENST00000220509 LEO1Q8WVC0 666 aaPredicted RBP12□□□□□ -0.49
VPS18-201ENST00000220509 MRPS27Q92552 414 aaKnown RBP12□□□□□ -0.49
VPS18-201ENST00000220509 KAZALD1Q96I82 304 aa12□□□□□ -0.49
VPS18-201ENST00000220509 WWC3Q9ULE0 1092 aa12□□□□□ -0.49
VPS18-201ENST00000220509 A0A1B0GVL5 298 aa12□□□□□ -0.49
VPS18-201ENST00000220509 EPB41L2O43491 1005 aaKnown RBP12□□□□□ -0.49
VPS18-201ENST00000220509 DHX8Q14562 1220 aaKnown RBP12□□□□□ -0.49
VPS18-201ENST00000220509 C11orf57Q6ZUT1 292 aaPredicted RBP12□□□□□ -0.49
VPS18-201ENST00000220509 ZNF444Q8N0Y2 327 aaPredicted RBP12□□□□□ -0.49
VPS18-201ENST00000220509 MICALL1Q8N3F8 863 aa12□□□□□ -0.49
VPS18-201ENST00000220509 MARCH10Q8NA82 808 aaPredicted RBP12□□□□□ -0.49
VPS18-201ENST00000220509 ARHGEF1Q92888 912 aaKnown RBP12□□□□□ -0.49
VPS18-201ENST00000220509 IFNKQ9P0W0 207 aa12□□□□□ -0.49
VPS18-201ENST00000220509 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12□□□□□ -0.49
VPS18-201ENST00000220509 CTIFO43310 598 aaKnown RBP12□□□□□ -0.49
VPS18-201ENST00000220509 PRDM1O75626 825 aa12□□□□□ -0.49
VPS18-201ENST00000220509 NLRP5P59047 1200 aa12□□□□□ -0.49
VPS18-201ENST00000220509 GIGYF2Q6Y7W6 1299 aaKnown RBP12□□□□□ -0.49
VPS18-201ENST00000220509 ZBTB38Q8NAP3 1195 aaPredicted RBP12□□□□□ -0.49
VPS18-201ENST00000220509 LTN1O94822 1766 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 NFAT5O94916 1531 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 DCCP43146 1447 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 ZNF532Q9HCE3 1301 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 SPTLC2O15270 562 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 ECM2O94769 699 aaPredicted RBP11.99□□□□□ -0.49
VPS18-201ENST00000220509 SETSIPP0DME0 302 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 SYKP43405 635 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 ZSCAN26Q16670 478 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 ESR2Q92731 530 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 CARD6Q9BX69 1037 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 MAP3K15Q6ZN16 1313 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 IBSPP21815 317 aaPredicted RBP11.99□□□□□ -0.49
VPS18-201ENST00000220509 FILIP1LQ4L180 1135 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 JAKMIP3Q5VZ66 844 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 ARMC3Q5W041 872 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 KRT23Q9C075 422 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 VAT1LQ9HCJ6 419 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 SEC31BQ9NQW1 1179 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 TMCO5BA8MYB1 307 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 CTSWP56202 376 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 GOLGA8FQ08AF8 430 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 GOLGA8DPQ0D2H9 430 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 C1QTNF12Q5T7M4 302 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 LEKR1Q6ZMV7 388 aa11.99□□□□□ -0.49
VPS18-201ENST00000220509 PIAS4Q8N2W9 510 aaPredicted RBP11.99□□□□□ -0.49
VPS18-201ENST00000220509 RPAP1Q9BWH6 1393 aaPredicted RBP11.98□□□□□ -0.49
VPS18-201ENST00000220509 MAGEB6P1A0A0J9YX57 407 aa11.98□□□□□ -0.49
VPS18-201ENST00000220509 MNAT1P51948 309 aa11.98□□□□□ -0.49
VPS18-201ENST00000220509 MTX1Q13505 466 aa11.98□□□□□ -0.49
VPS18-201ENST00000220509 MSL3Q8N5Y2 521 aaKnown RBP11.98□□□□□ -0.49
VPS18-201ENST00000220509 PHKBQ93100 1093 aa11.98□□□□□ -0.49
VPS18-201ENST00000220509 CDK5RAP3Q96JB5 506 aa11.98□□□□□ -0.49
VPS18-201ENST00000220509 CPDO75976 1380 aa11.98□□□□□ -0.49
VPS18-201ENST00000220509 CCDC181Q5TID7 509 aa11.98□□□□□ -0.49
VPS18-201ENST00000220509 KCNG4Q8TDN1 519 aa11.98□□□□□ -0.49
VPS18-201ENST00000220509 CCDC102AQ96A19 550 aa11.98□□□□□ -0.49
VPS18-201ENST00000220509 CDCA7Q9BWT1 371 aaPredicted RBP11.98□□□□□ -0.49
VPS18-201ENST00000220509 CEP131Q9UPN4 1083 aa11.98□□□□□ -0.49
VPS18-201ENST00000220509 SRCAPQ6ZRS2 3230 aa11.98□□□□□ -0.49
VPS18-201ENST00000220509 CAMTA1Q9Y6Y1 1673 aa11.98□□□□□ -0.49
VPS18-201ENST00000220509 PCCAP05165 728 aaPredicted RBP11.98□□□□□ -0.49
VPS18-201ENST00000220509 IFIT1BQ5T764 474 aaKnown RBP11.98□□□□□ -0.49
VPS18-201ENST00000220509 LPIN2Q92539 896 aa11.98□□□□□ -0.49
VPS18-201ENST00000220509 CLSTN2Q9H4D0 955 aa11.98□□□□□ -0.49
VPS18-201ENST00000220509 FGAP02671 866 aa11.97□□□□□ -0.49
VPS18-201ENST00000220509 SSBP05455 408 aaKnown RBP eCLIP11.97□□□□□ -0.49
VPS18-201ENST00000220509 GNG11P61952 73 aa11.97□□□□□ -0.49
VPS18-201ENST00000220509 CTDSPL2Q05D32 466 aa11.97□□□□□ -0.49
VPS18-201ENST00000220509 MAP9Q49MG5 647 aa11.97□□□□□ -0.49
VPS18-201ENST00000220509 TPTE2Q6XPS3 522 aa11.97□□□□□ -0.49
VPS18-201ENST00000220509 NLRP10Q86W26 655 aa11.97□□□□□ -0.49
VPS18-201ENST00000220509 CNNM2Q9H8M5 875 aa11.97□□□□□ -0.49
VPS18-201ENST00000220509 RTCBQ9Y3I0 505 aaKnown RBP11.97□□□□□ -0.49
VPS18-201ENST00000220509 MORC2Q9Y6X9 1032 aaPredicted RBP11.97□□□□□ -0.49
VPS18-201ENST00000220509 CYP19A1P11511 503 aaPredicted RBP11.97□□□□□ -0.49
VPS18-201ENST00000220509 PHKA1P46020 1223 aa11.97□□□□□ -0.49
VPS18-201ENST00000220509 CLCN6P51797 869 aa11.97□□□□□ -0.49
VPS18-201ENST00000220509 DACH1Q9UI36 760 aa11.97□□□□□ -0.49
VPS18-201ENST00000220509 ANGEL1Q9UNK9 670 aaKnown RBP11.97□□□□□ -0.49
VPS18-201ENST00000220509 F8W031 263 aaPredicted RBP11.97□□□□□ -0.49
VPS18-201ENST00000220509 CAPN15O75808 1086 aa11.97□□□□□ -0.49
VPS18-201ENST00000220509 FOXD4Q12950 439 aaPredicted RBP11.97□□□□□ -0.49
VPS18-201ENST00000220509 NECTIN1Q15223 517 aa11.97□□□□□ -0.49
VPS18-201ENST00000220509 CCDC102BQ68D86 513 aa11.97□□□□□ -0.49
VPS18-201ENST00000220509 DSCC1Q9BVC3 393 aa11.97□□□□□ -0.49
VPS18-201ENST00000220509 CRNKL1Q9BZJ0 848 aaKnown RBP11.97□□□□□ -0.49
VPS18-201ENST00000220509 ZHX3Q9H4I2 956 aa11.97□□□□□ -0.49
VPS18-201ENST00000220509 TFCP2L1Q9NZI6 479 aa11.97□□□□□ -0.49
VPS18-201ENST00000220509 PPP1R1BQ9UD71 204 aaPredicted RBP11.97□□□□□ -0.49
VPS18-201ENST00000220509 SRP68Q9UHB9 627 aaKnown RBP11.97□□□□□ -0.49
VPS18-201ENST00000220509 TOPAZ1Q8N9V7 1692 aa11.97□□□□□ -0.49
VPS18-201ENST00000220509 PPFIBP1Q86W92 1011 aa11.96□□□□□ -0.49
VPS18-201ENST00000220509 PICK1Q9NRD5 415 aa11.96□□□□□ -0.49
VPS18-201ENST00000220509 H7C1W4 665 aa11.96□□□□□ -0.49
VPS18-201ENST00000220509 OAS2P29728 719 aaKnown RBP11.96□□□□□ -0.49
VPS18-201ENST00000220509 EVCP57679 992 aa11.96□□□□□ -0.49
VPS18-201ENST00000220509 PDE4BQ07343 736 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms