RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 PARP9Q8IXQ6 854 aa12.27□□□□□ -0.44
USP31-201ENST00000219689 SKIP12755 728 aa12.27□□□□□ -0.44
USP31-201ENST00000219689 ITIH3Q06033 890 aa12.27□□□□□ -0.44
USP31-201ENST00000219689 RTN1Q16799 776 aa12.27□□□□□ -0.44
USP31-201ENST00000219689 CREB3L3Q68CJ9 461 aa12.27□□□□□ -0.44
USP31-201ENST00000219689 PLEKHM2Q8IWE5 1019 aa12.27□□□□□ -0.44
USP31-201ENST00000219689 LEO1Q8WVC0 666 aaPredicted RBP12.27□□□□□ -0.44
USP31-201ENST00000219689 PCF11O94913 1555 aaKnown RBP12.27□□□□□ -0.44
USP31-201ENST00000219689 SLMAPQ14BN4 828 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 UBL4BQ8N7F7 174 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.27□□□□□ -0.45
USP31-201ENST00000219689 TNNQ9UQP3 1299 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 FAM170AA1A519 330 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 DCAF17Q5H9S7 520 aaPredicted RBP12.27□□□□□ -0.45
USP31-201ENST00000219689 ATP8B1O43520 1251 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 CHMP2AO43633 222 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 ZPR1O75312 459 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 IFNAR2P48551 515 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 ASIC3Q9UHC3 531 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 PAIP2BQ9ULR5 123 aaKnown RBP12.27□□□□□ -0.45
USP31-201ENST00000219689 ASXL1Q8IXJ9 1541 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 RASSF10A6NK89 507 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 TBCAO75347 108 aaKnown RBP12.27□□□□□ -0.45
USP31-201ENST00000219689 RAPGEF1Q13905 1077 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 PHLPP2Q6ZVD8 1323 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 CFAP70Q5T0N1 1121 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 FBXW10Q5XX13 1052 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 CDC37L1Q7L3B6 337 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 TRIM58Q8NG06 486 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 EEF1DP29692 281 aaKnown RBP12.27□□□□□ -0.45
USP31-201ENST00000219689 PDCD2Q16342 344 aaPredicted RBP12.27□□□□□ -0.45
USP31-201ENST00000219689 ASIC2Q16515 512 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 HVCN1Q96D96 273 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 NOC4LQ9BVI4 516 aaKnown RBP12.27□□□□□ -0.45
USP31-201ENST00000219689 CTTNBP2NLQ9P2B4 639 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 ZNF318Q5VUA4 2279 aa12.27□□□□□ -0.45
USP31-201ENST00000219689 RWDD2BP57060 319 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 BIN2Q9UBW5 565 aaPredicted RBP12.26□□□□□ -0.45
USP31-201ENST00000219689 CDC25BP30305 580 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 GEN1Q17RS7 908 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 PPP1R42Q7Z4L9 355 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 MYH1P12882 1939 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 MYH2Q9UKX2 1941 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 MYH4Q9Y623 1939 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 GOLGA8FQ08AF8 430 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 GOLGA8DPQ0D2H9 430 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 PKP1Q13835 747 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 MAK16Q9BXY0 300 aaKnown RBP12.26□□□□□ -0.45
USP31-201ENST00000219689 IFIH1Q9BYX4 1025 aaKnown RBP12.26□□□□□ -0.45
USP31-201ENST00000219689 MKNK2Q9HBH9 465 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 ADAM21Q9UKJ8 722 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 STXBP4Q6ZWJ1 553 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 PARD6BQ9BYG5 372 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 MORC2Q9Y6X9 1032 aaPredicted RBP12.26□□□□□ -0.45
USP31-201ENST00000219689 TTLL11Q8NHH1 800 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 VAT1LQ9HCJ6 419 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 SLC4A8Q2Y0W8 1093 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 PLEKHO1Q53GL0 409 aaPredicted RBP12.26□□□□□ -0.45
USP31-201ENST00000219689 TXLNGQ9NUQ3 528 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 SBNO1A3KN83 1393 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 HIBCHQ6NVY1 386 aaPredicted RBP12.26□□□□□ -0.45
USP31-201ENST00000219689 SCYL3Q8IZE3 742 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 CHAMP1Q96JM3 812 aa12.26□□□□□ -0.45
USP31-201ENST00000219689 SPOPO43791 374 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 MAP3K7CLP57077 242 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 ETF1P62495 437 aaKnown RBP12.25□□□□□ -0.45
USP31-201ENST00000219689 SRGAP1Q7Z6B7 1085 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 WWC3Q9ULE0 1092 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 RBM5P52756 815 aaKnown RBP eCLIP12.25□□□□□ -0.45
USP31-201ENST00000219689 ESRRGP62508 458 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 PTPDC1A2A3K4 754 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 CROCCP2Q86T23 111 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 RPGRIP1Q96KN7 1286 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 TSC22D4Q9Y3Q8 395 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 RCN2Q14257 317 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 RAB17Q9H0T7 212 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 KIF9Q9HAQ2 790 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 MFSD6Q6ZSS7 791 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 PPP1R12AO14974 1030 aaPredicted RBP12.25□□□□□ -0.45
USP31-201ENST00000219689 PPM1FP49593 454 aaPredicted RBP12.25□□□□□ -0.45
USP31-201ENST00000219689 C2orf54Q08AI8 447 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 BRAPQ7Z569 592 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 TYW1BQ6NUM6 668 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 TRMT1LQ7Z2T5 733 aaKnown RBP12.25□□□□□ -0.45
USP31-201ENST00000219689 PTPROQ16827 1216 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 FAM173BQ6P4H8 233 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 LRRC27Q9C0I9 530 aa12.25□□□□□ -0.45
USP31-201ENST00000219689 MAN1A2O60476 641 aa12.24□□□□□ -0.45
USP31-201ENST00000219689 KRT9P35527 623 aa12.24□□□□□ -0.45
USP31-201ENST00000219689 TBC1D8BQ0IIM8 1120 aa12.24□□□□□ -0.45
USP31-201ENST00000219689 CASKIN1Q8WXD9 1431 aa12.24□□□□□ -0.45
USP31-201ENST00000219689 KRT2P35908 639 aa12.24□□□□□ -0.45
USP31-201ENST00000219689 KIAA2013Q8IYS2 634 aa12.24□□□□□ -0.45
USP31-201ENST00000219689 CHCHD3Q9NX63 227 aaKnown RBP12.24□□□□□ -0.45
USP31-201ENST00000219689 TAB2Q9NYJ8 693 aa12.24□□□□□ -0.45
USP31-201ENST00000219689 NMIQ13287 307 aaPredicted RBP12.24□□□□□ -0.45
USP31-201ENST00000219689 TRMT44Q8IYL2 757 aaKnown RBP12.24□□□□□ -0.45
USP31-201ENST00000219689 CDK19Q9BWU1 502 aa12.24□□□□□ -0.45
USP31-201ENST00000219689 KDM1AO60341 852 aa12.24□□□□□ -0.45
USP31-201ENST00000219689 INPP1P49441 399 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms