RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 ITGB4P16144 1822 aa15.27■□□□□ 0.04
SRP54-201ENST00000216774 PNPLA7Q6ZV29 1317 aa15.27■□□□□ 0.04
SRP54-201ENST00000216774 CCDC196A0A1B0GTZ2 297 aa15.27■□□□□ 0.04
SRP54-201ENST00000216774 GSG1L2A8MUP6 293 aa15.27■□□□□ 0.04
SRP54-201ENST00000216774 ZSCAN12O43309 604 aa15.27■□□□□ 0.04
SRP54-201ENST00000216774 H2AFXP16104 143 aaPredicted RBP15.27■□□□□ 0.04
SRP54-201ENST00000216774 PTPREP23469 700 aa15.27■□□□□ 0.04
SRP54-201ENST00000216774 TOB1P50616 345 aaPredicted RBP15.27■□□□□ 0.04
SRP54-201ENST00000216774 RASGRF1Q13972 1273 aa15.27■□□□□ 0.04
SRP54-201ENST00000216774 RTN1Q16799 776 aa15.27■□□□□ 0.04
SRP54-201ENST00000216774 DIS3L2Q8IYB7 885 aaKnown RBP15.27■□□□□ 0.04
SRP54-201ENST00000216774 FBXO2Q9UK22 296 aaPredicted RBP15.27■□□□□ 0.04
SRP54-201ENST00000216774 BTBD18B2RXH4 712 aa15.27■□□□□ 0.03
SRP54-201ENST00000216774 ARHGAP6O43182 974 aa15.27■□□□□ 0.03
SRP54-201ENST00000216774 BMP6P22004 513 aa15.27■□□□□ 0.03
SRP54-201ENST00000216774 POSTNQ15063 836 aa15.27■□□□□ 0.03
SRP54-201ENST00000216774 ZNF34Q8IZ26 560 aa15.27■□□□□ 0.03
SRP54-201ENST00000216774 TRIML1Q8N9V2 468 aa15.27■□□□□ 0.03
SRP54-201ENST00000216774 INCENPQ9NQS7 918 aa15.27■□□□□ 0.03
SRP54-201ENST00000216774 ZHX1Q9UKY1 873 aaPredicted RBP15.27■□□□□ 0.03
SRP54-201ENST00000216774 NUP98P52948 1817 aa15.27■□□□□ 0.03
SRP54-201ENST00000216774 DEXIO95424 95 aa15.26■□□□□ 0.03
SRP54-201ENST00000216774 TBX2Q13207 712 aaPredicted RBP15.26■□□□□ 0.03
SRP54-201ENST00000216774 KANK3Q6NY19 840 aa15.26■□□□□ 0.03
SRP54-201ENST00000216774 TRIM65Q6PJ69 517 aa15.26■□□□□ 0.03
SRP54-201ENST00000216774 ARMT1Q9H993 441 aa15.26■□□□□ 0.03
SRP54-201ENST00000216774 SLAIN2Q9P270 581 aa15.26■□□□□ 0.03
SRP54-201ENST00000216774 CEP131Q9UPN4 1083 aa15.26■□□□□ 0.03
SRP54-201ENST00000216774 ZBTB1Q9Y2K1 713 aa15.26■□□□□ 0.03
SRP54-201ENST00000216774 UBE2Q2LH0YL09 131 aa15.26■□□□□ 0.03
SRP54-201ENST00000216774 IL6STP40189 918 aaPredicted RBP15.26■□□□□ 0.03
SRP54-201ENST00000216774 SARSP49591 514 aaKnown RBP15.26■□□□□ 0.03
SRP54-201ENST00000216774 PDE4BQ07343 736 aa15.26■□□□□ 0.03
SRP54-201ENST00000216774 WTAPQ15007 396 aa15.26■□□□□ 0.03
SRP54-201ENST00000216774 REXO1L1PQ8IX06 675 aa15.26■□□□□ 0.03
SRP54-201ENST00000216774 ENOX1Q8TC92 643 aaKnown RBP15.26■□□□□ 0.03
SRP54-201ENST00000216774 SLC4A9Q96Q91 983 aa15.26■□□□□ 0.03
SRP54-201ENST00000216774 INTS13Q9NVM9 706 aa15.26■□□□□ 0.03
SRP54-201ENST00000216774 MAN1B1Q9UKM7 699 aa15.26■□□□□ 0.03
SRP54-201ENST00000216774 TACC3Q9Y6A5 838 aa15.26■□□□□ 0.03
SRP54-201ENST00000216774 ERICH2A1L162 156 aa15.25■□□□□ 0.03
SRP54-201ENST00000216774 GOLGA6L9A6NEM1 432 aa15.25■□□□□ 0.03
SRP54-201ENST00000216774 TMEM232C9JQI7 657 aa15.25■□□□□ 0.03
SRP54-201ENST00000216774 ZNF18P17022 549 aa15.25■□□□□ 0.03
SRP54-201ENST00000216774 GUCY1A2P33402 732 aa15.25■□□□□ 0.03
SRP54-201ENST00000216774 ERCC6LQ2NKX8 1250 aa15.25■□□□□ 0.03
SRP54-201ENST00000216774 TMEM139Q8IV31 216 aa15.25■□□□□ 0.03
SRP54-201ENST00000216774 CRACR2BQ8N4Y2 399 aaPredicted RBP15.25■□□□□ 0.03
SRP54-201ENST00000216774 UTP14AQ9BVJ6 771 aaKnown RBP15.25■□□□□ 0.03
SRP54-201ENST00000216774 BCL11BQ9C0K0 894 aaPredicted RBP15.25■□□□□ 0.03
SRP54-201ENST00000216774 RNF41Q9H4P4 317 aaPredicted RBP15.25■□□□□ 0.03
SRP54-201ENST00000216774 DNAI1Q9UI46 699 aa15.25■□□□□ 0.03
SRP54-201ENST00000216774 TDO2P48775 406 aa15.24■□□□□ 0.03
SRP54-201ENST00000216774 MORC3Q14149 939 aa15.24■□□□□ 0.03
SRP54-201ENST00000216774 DZIP3Q86Y13 1208 aaKnown RBP15.24■□□□□ 0.03
SRP54-201ENST00000216774 HELBQ8NG08 1087 aaPredicted RBP15.24■□□□□ 0.03
SRP54-201ENST00000216774 SMARCE1Q969G3 411 aa15.24■□□□□ 0.03
SRP54-201ENST00000216774 TAOK2Q9UL54 1235 aa15.24■□□□□ 0.03
SRP54-201ENST00000216774 SRPRBQ9Y5M8 271 aaKnown RBP15.24■□□□□ 0.03
SRP54-201ENST00000216774 FOXN1O15353 648 aa15.24■□□□□ 0.03
SRP54-201ENST00000216774 STX10O60499 249 aa15.24■□□□□ 0.03
SRP54-201ENST00000216774 PPP2R5BQ15173 497 aa15.24■□□□□ 0.03
SRP54-201ENST00000216774 ZNF446Q9NWS9 450 aa15.24■□□□□ 0.03
SRP54-201ENST00000216774 KCNJ14Q9UNX9 436 aa15.24■□□□□ 0.03
SRP54-201ENST00000216774 BCORQ6W2J9 1755 aa15.24■□□□□ 0.03
SRP54-201ENST00000216774 POLR2DO15514 142 aaKnown RBP15.23■□□□□ 0.03
SRP54-201ENST00000216774 CT47A1Q5JQC4 288 aaPredicted RBP15.23■□□□□ 0.03
SRP54-201ENST00000216774 SPECC1LQ69YQ0 1117 aa15.23■□□□□ 0.03
SRP54-201ENST00000216774 NUTM2AQ8IVF1 878 aaPredicted RBP15.23■□□□□ 0.03
SRP54-201ENST00000216774 SYTL4Q96C24 671 aaPredicted RBP15.23■□□□□ 0.03
SRP54-201ENST00000216774 MPHOSPH8Q99549 860 aa15.23■□□□□ 0.03
SRP54-201ENST00000216774 BAG1Q99933 345 aaPredicted RBP15.23■□□□□ 0.03
SRP54-201ENST00000216774 PPP2R2CQ9Y2T4 447 aa15.23■□□□□ 0.03
SRP54-201ENST00000216774 SLC4A4Q9Y6R1 1079 aa15.23■□□□□ 0.03
SRP54-201ENST00000216774 BMS1Q14692 1282 aaKnown RBP15.23■□□□□ 0.03
SRP54-201ENST00000216774 SPECC1Q5M775 1068 aa15.23■□□□□ 0.03
SRP54-201ENST00000216774 LCORLQ8N3X6 602 aa15.23■□□□□ 0.03
SRP54-201ENST00000216774 FANCBQ8NB91 859 aa15.23■□□□□ 0.03
SRP54-201ENST00000216774 SPATA20Q8TB22 786 aa15.23■□□□□ 0.03
SRP54-201ENST00000216774 NFE2L3Q9Y4A8 694 aa15.23■□□□□ 0.03
SRP54-201ENST00000216774 DISP2A7MBM2 1401 aa15.22■□□□□ 0.03
SRP54-201ENST00000216774 NHSL1Q5SYE7 1610 aa15.22■□□□□ 0.03
SRP54-201ENST00000216774 ACTN4O43707 911 aaKnown RBP15.22■□□□□ 0.03
SRP54-201ENST00000216774 PRKAB2O43741 272 aa15.22■□□□□ 0.03
SRP54-201ENST00000216774 TPM1P09493 284 aa15.22■□□□□ 0.03
SRP54-201ENST00000216774 ERCC5P28715 1186 aaPredicted RBP15.22■□□□□ 0.03
SRP54-201ENST00000216774 FAM193AP78312 1265 aa15.22■□□□□ 0.03
SRP54-201ENST00000216774 RRP12Q5JTH9 1297 aaKnown RBP15.22■□□□□ 0.03
SRP54-201ENST00000216774 ZNF654Q8IZM8 581 aa15.22■□□□□ 0.03
SRP54-201ENST00000216774 LRRN4CLQ8ND94 238 aa15.22■□□□□ 0.03
SRP54-201ENST00000216774 CCDC34Q96HJ3 373 aa15.22■□□□□ 0.03
SRP54-201ENST00000216774 SERTAD1Q9UHV2 236 aa15.22■□□□□ 0.03
SRP54-201ENST00000216774 PLCH1Q4KWH8 1693 aa15.22■□□□□ 0.03
SRP54-201ENST00000216774 VWA3AA6NCI4 1184 aa15.22■□□□□ 0.03
SRP54-201ENST00000216774 SLFN14P0C7P3 912 aa15.22■□□□□ 0.03
SRP54-201ENST00000216774 CDK11BP21127 795 aaKnown RBP15.22■□□□□ 0.03
SRP54-201ENST00000216774 GRIN1Q05586 938 aa15.22■□□□□ 0.03
SRP54-201ENST00000216774 FMR1Q06787 632 aaKnown RBP eCLIP15.22■□□□□ 0.032e-7■□□□□ 8.6
SRP54-201ENST00000216774 ARHGAP29Q52LW3 1261 aa15.22■□□□□ 0.03
SRP54-201ENST00000216774 UBXN4Q92575 508 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms