RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 RRAGBQ5VZM2 374 aa15.57■□□□□ 0.08
SIX4-201ENST00000216513 SPATA31A1Q5TZJ5 1347 aa15.57■□□□□ 0.08
SIX4-201ENST00000216513 IGSF1Q8N6C5 1336 aa15.57■□□□□ 0.08
SIX4-201ENST00000216513 HLFQ16534 295 aa15.57■□□□□ 0.08
SIX4-201ENST00000216513 FAM193BQ96PV7 902 aaPredicted RBP15.57■□□□□ 0.08
SIX4-201ENST00000216513 SHROOM2Q13796 1616 aa15.57■□□□□ 0.08
SIX4-201ENST00000216513 ERVV-1B6SEH8 477 aa15.57■□□□□ 0.08
SIX4-201ENST00000216513 PHKA1P46020 1223 aa15.57■□□□□ 0.08
SIX4-201ENST00000216513 HDAC1Q13547 482 aaPredicted RBP15.57■□□□□ 0.08
SIX4-201ENST00000216513 ZEB2O60315 1214 aa15.57■□□□□ 0.08
SIX4-201ENST00000216513 USP14P54578 494 aa15.57■□□□□ 0.08
SIX4-201ENST00000216513 NUP88Q99567 741 aaPredicted RBP15.57■□□□□ 0.08
SIX4-201ENST00000216513 CLASP1Q7Z460 1538 aa15.56■□□□□ 0.08
SIX4-201ENST00000216513 hCG_1642624A0A1W2PR95 340 aa15.56■□□□□ 0.08
SIX4-201ENST00000216513 PPARAQ07869 468 aa15.56■□□□□ 0.08
SIX4-201ENST00000216513 CARMIL3Q8ND23 1372 aa15.56■□□□□ 0.08
SIX4-201ENST00000216513 ZNF174Q15697 407 aa15.56■□□□□ 0.08
SIX4-201ENST00000216513 NAP1L4Q99733 375 aaKnown RBP15.56■□□□□ 0.08
SIX4-201ENST00000216513 BMP15O95972 392 aa15.56■□□□□ 0.08
SIX4-201ENST00000216513 CACNB3P54284 484 aa15.56■□□□□ 0.08
SIX4-201ENST00000216513 DTHD1Q6ZMT9 781 aa15.56■□□□□ 0.08
SIX4-201ENST00000216513 DHX32Q7L7V1 743 aaKnown RBP15.56■□□□□ 0.08
SIX4-201ENST00000216513 DHX58Q96C10 678 aa15.56■□□□□ 0.08
SIX4-201ENST00000216513 SKIV2LQ15477 1246 aaKnown RBP15.56■□□□□ 0.08
SIX4-201ENST00000216513 ANO3Q9BYT9 981 aa15.56■□□□□ 0.08
SIX4-201ENST00000216513 DCTPP1Q9H773 170 aa15.56■□□□□ 0.08
SIX4-201ENST00000216513 SMTNP53814 917 aa15.55■□□□□ 0.08
SIX4-201ENST00000216513 EEPD1Q7L9B9 569 aa15.55■□□□□ 0.08
SIX4-201ENST00000216513 BCCIPQ9P287 314 aaKnown RBP eCLIP15.55■□□□□ 0.08
SIX4-201ENST00000216513 HACL1Q9UJ83 578 aa15.55■□□□□ 0.08
SIX4-201ENST00000216513 RAD50Q92878 1312 aa15.55■□□□□ 0.08
SIX4-201ENST00000216513 C1orf167Q5SNV9 1468 aa15.55■□□□□ 0.08
SIX4-201ENST00000216513 POLR3GO15318 223 aaPredicted RBP15.55■□□□□ 0.08
SIX4-201ENST00000216513 BIRC3Q13489 604 aa15.55■□□□□ 0.08
SIX4-201ENST00000216513 TMC6Q7Z403 805 aa15.55■□□□□ 0.08
SIX4-201ENST00000216513 ARHGEF35A5YM69 484 aa15.55■□□□□ 0.08
SIX4-201ENST00000216513 DKC1O60832 514 aaKnown RBP eCLIP15.55■□□□□ 0.08
SIX4-201ENST00000216513 PIK3AP1Q6ZUJ8 805 aa15.55■□□□□ 0.08
SIX4-201ENST00000216513 ZBTB24O43167 697 aaPredicted RBP15.55■□□□□ 0.08
SIX4-201ENST00000216513 ZNF157P51786 506 aaPredicted RBP15.55■□□□□ 0.08
SIX4-201ENST00000216513 HS2ST1Q7LGA3 356 aa15.55■□□□□ 0.08
SIX4-201ENST00000216513 EDC3Q96F86 508 aaKnown RBP15.55■□□□□ 0.08
SIX4-201ENST00000216513 URI1O94763 535 aaPredicted RBP15.55■□□□□ 0.08
SIX4-201ENST00000216513 PDE8BO95263 885 aa15.55■□□□□ 0.08
SIX4-201ENST00000216513 SLFN13Q68D06 897 aa15.55■□□□□ 0.08
SIX4-201ENST00000216513 OTUD7AQ8TE49 926 aaPredicted RBP15.55■□□□□ 0.08
SIX4-201ENST00000216513 FAM227BQ96M60 508 aa15.55■□□□□ 0.08
SIX4-201ENST00000216513 PALD1Q9ULE6 856 aa15.55■□□□□ 0.08
SIX4-201ENST00000216513 TXKP42681 527 aa15.54■□□□□ 0.08
SIX4-201ENST00000216513 HACE1Q8IYU2 909 aa15.54■□□□□ 0.08
SIX4-201ENST00000216513 ZBED2Q9BTP6 218 aa15.54■□□□□ 0.08
SIX4-201ENST00000216513 COA1Q9GZY4 146 aa15.54■□□□□ 0.08
SIX4-201ENST00000216513 IBTKQ9P2D0 1353 aaPredicted RBP15.54■□□□□ 0.08
SIX4-201ENST00000216513 ESPNB1AK53 854 aa15.54■□□□□ 0.08
SIX4-201ENST00000216513 NR1I2O75469 434 aa15.54■□□□□ 0.08
SIX4-201ENST00000216513 PNMA3Q9UL41 463 aa15.54■□□□□ 0.08
SIX4-201ENST00000216513 GOLGA8HP0CJ92 632 aa15.54■□□□□ 0.08
SIX4-201ENST00000216513 ADORA1P30542 326 aa15.54■□□□□ 0.08
SIX4-201ENST00000216513 SLC15A2Q16348 729 aa15.54■□□□□ 0.08
SIX4-201ENST00000216513 SEPT14Q6ZU15 432 aa15.54■□□□□ 0.08
SIX4-201ENST00000216513 FAM114A1Q8IWE2 563 aa15.54■□□□□ 0.08
SIX4-201ENST00000216513 FNBP1Q96RU3 617 aa15.54■□□□□ 0.08
SIX4-201ENST00000216513 PER1O15534 1290 aaPredicted RBP15.54■□□□□ 0.08
SIX4-201ENST00000216513 CCP110O43303 1012 aa15.54■□□□□ 0.08
SIX4-201ENST00000216513 TBC1D5Q92609 795 aa15.54■□□□□ 0.08
SIX4-201ENST00000216513 PABPN1LA6NDY0 278 aaKnown RBP15.54■□□□□ 0.08
SIX4-201ENST00000216513 WRNIP1Q96S55 665 aa15.54■□□□□ 0.08
SIX4-201ENST00000216513 LRFN2Q9ULH4 789 aa15.54■□□□□ 0.08
SIX4-201ENST00000216513 PALM3A6NDB9 673 aaPredicted RBP15.53■□□□□ 0.08
SIX4-201ENST00000216513 HOXD10P28358 340 aa15.53■□□□□ 0.08
SIX4-201ENST00000216513 KBTBD3Q8NAB2 608 aa15.53■□□□□ 0.08
SIX4-201ENST00000216513 ANO10Q9NW15 660 aa15.53■□□□□ 0.08
SIX4-201ENST00000216513 SEMA3EO15041 775 aa15.53■□□□□ 0.08
SIX4-201ENST00000216513 NFIXQ14938 502 aa15.53■□□□□ 0.08
SIX4-201ENST00000216513 CLEC4GQ6UXB4 293 aa15.53■□□□□ 0.08
SIX4-201ENST00000216513 COA7Q96BR5 231 aa15.53■□□□□ 0.08
SIX4-201ENST00000216513 OTUD5Q96G74 571 aa15.53■□□□□ 0.08
SIX4-201ENST00000216513 ARHGAP29Q52LW3 1261 aa15.53■□□□□ 0.08
SIX4-201ENST00000216513 FAM200AQ8TCP9 573 aa15.53■□□□□ 0.08
SIX4-201ENST00000216513 KANK3Q6NY19 840 aa15.53■□□□□ 0.08
SIX4-201ENST00000216513 ERCC4Q92889 916 aaPredicted RBP15.53■□□□□ 0.08
SIX4-201ENST00000216513 RMND1Q9NWS8 449 aa15.53■□□□□ 0.08
SIX4-201ENST00000216513 MRPL11Q9Y3B7 192 aaKnown RBP15.53■□□□□ 0.08
SIX4-201ENST00000216513 SYKP43405 635 aa15.53■□□□□ 0.08
SIX4-201ENST00000216513 MRPS9P82933 396 aaKnown RBP15.53■□□□□ 0.08
SIX4-201ENST00000216513 ABI1Q8IZP0 508 aa15.52■□□□□ 0.08
SIX4-201ENST00000216513 AATKQ6ZMQ8 1374 aa15.52■□□□□ 0.08
SIX4-201ENST00000216513 GCOM1H8Y6P7 765 aaPredicted RBP15.52■□□□□ 0.08
SIX4-201ENST00000216513 POLR2MP0CAP2 368 aa15.52■□□□□ 0.08
SIX4-201ENST00000216513 LMAN1P49257 510 aa15.52■□□□□ 0.08
SIX4-201ENST00000216513 SUGCTQ9HAC7 445 aa15.52■□□□□ 0.08
SIX4-201ENST00000216513 CDAN1Q8IWY9 1227 aa15.52■□□□□ 0.07
SIX4-201ENST00000216513 DIXDC1Q155Q3 683 aa15.52■□□□□ 0.07
SIX4-201ENST00000216513 ERCC3P19447 782 aa15.52■□□□□ 0.07
SIX4-201ENST00000216513 RNF34Q969K3 372 aa15.52■□□□□ 0.07
SIX4-201ENST00000216513 GLT8D2Q9H1C3 349 aa15.52■□□□□ 0.07
SIX4-201ENST00000216513 GJC1P36383 396 aa15.51■□□□□ 0.07
SIX4-201ENST00000216513 MCF2L2Q86YR7 1114 aa15.51■□□□□ 0.07
SIX4-201ENST00000216513 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.51■□□□□ 0.07
SIX4-201ENST00000216513 V9GYY5 206 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms