RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 ARMT1Q9H993 441 aa13.36□□□□□ -0.27
CDKL1-201ENST00000216378 USP40Q9NVE5 1235 aa13.36□□□□□ -0.27
CDKL1-201ENST00000216378 HDAC9Q9UKV0 1011 aa13.36□□□□□ -0.27
CDKL1-201ENST00000216378 GPR75-ASB3A0A0A6YYF3 556 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 SLC27A2O14975 620 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 PICALMQ13492 652 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 NECTIN1Q15223 517 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 SPDYE2Q495Y8 402 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 RUFY3Q7L099 469 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 SH3BP5LQ7L8J4 393 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 KRT26Q7Z3Y9 468 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 LRRC2Q9BYS8 371 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 PGAP2Q9UHJ9 254 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 FOXP2O15409 715 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 TOMM70O94826 608 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 PRKG1Q13976 671 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 RAB3GAP1Q15042 981 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 PNMA8AQ86V59 439 aaPredicted RBP13.35□□□□□ -0.27
CDKL1-201ENST00000216378 LDHDQ86WU2 507 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 NECAB1Q8N987 351 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 MTMR14Q8NCE2 650 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 SDR42E1Q8WUS8 393 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 ZDHHC9Q9Y397 364 aa13.35□□□□□ -0.27
CDKL1-201ENST00000216378 FAM196BA6NMK8 535 aa13.34□□□□□ -0.27
CDKL1-201ENST00000216378 MAP3K12Q12852 859 aa13.34□□□□□ -0.27
CDKL1-201ENST00000216378 RASA3Q14644 834 aa13.34□□□□□ -0.27
CDKL1-201ENST00000216378 CST9Q5W186 159 aa13.34□□□□□ -0.27
CDKL1-201ENST00000216378 MAP4K1Q92918 833 aa13.34□□□□□ -0.27
CDKL1-201ENST00000216378 DEFB129Q9H1M3 183 aa13.34□□□□□ -0.27
CDKL1-201ENST00000216378 ZNF408Q9H9D4 720 aa13.34□□□□□ -0.27
CDKL1-201ENST00000216378 SUGT1Q9Y2Z0 365 aa13.34□□□□□ -0.27
CDKL1-201ENST00000216378 BRCA2P51587 3418 aa13.34□□□□□ -0.27
CDKL1-201ENST00000216378 PPFIA3O75145 1194 aa13.33□□□□□ -0.27
CDKL1-201ENST00000216378 NBPF12Q5TAG4 269 aaPredicted RBP13.33□□□□□ -0.27
CDKL1-201ENST00000216378 SPTY2D1Q68D10 685 aaPredicted RBP13.33□□□□□ -0.27
CDKL1-201ENST00000216378 CHADLQ6NUI6 762 aa13.33□□□□□ -0.27
CDKL1-201ENST00000216378 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.33□□□□□ -0.27
CDKL1-201ENST00000216378 FAM163AQ96GL9 167 aaPredicted RBP13.33□□□□□ -0.27
CDKL1-201ENST00000216378 TEPSINQ96N21 525 aa13.33□□□□□ -0.27
CDKL1-201ENST00000216378 SSC5DA1L4H1 1573 aa13.33□□□□□ -0.28
CDKL1-201ENST00000216378 DDTLA6NHG4 134 aaPredicted RBP13.33□□□□□ -0.28
CDKL1-201ENST00000216378 MBD4O95243 580 aa13.33□□□□□ -0.28
CDKL1-201ENST00000216378 MRE11P49959 708 aa13.33□□□□□ -0.28
CDKL1-201ENST00000216378 ANAPC15P60006 121 aa13.33□□□□□ -0.28
CDKL1-201ENST00000216378 MAPKAPK5Q8IW41 473 aa13.33□□□□□ -0.28
CDKL1-201ENST00000216378 TGFBRAP1Q8WUH2 860 aa13.33□□□□□ -0.28
CDKL1-201ENST00000216378 CYP2D7A0A087X1C5 515 aa13.32□□□□□ -0.28
CDKL1-201ENST00000216378 HDLBPQ00341 1268 aaKnown RBP13.32□□□□□ -0.28
CDKL1-201ENST00000216378 STK3Q13188 491 aa13.32□□□□□ -0.28
CDKL1-201ENST00000216378 TTF1Q15361 905 aaPredicted RBP13.32□□□□□ -0.28
CDKL1-201ENST00000216378 SHROOM1Q2M3G4 852 aaPredicted RBP13.32□□□□□ -0.28
CDKL1-201ENST00000216378 TTC14Q96N46 770 aa13.32□□□□□ -0.28
CDKL1-201ENST00000216378 PDRG1Q9NUG6 133 aa13.32□□□□□ -0.28
CDKL1-201ENST00000216378 SAP30BPQ9UHR5 308 aaKnown RBP13.32□□□□□ -0.28
CDKL1-201ENST00000216378 MAST3O60307 1309 aa13.32□□□□□ -0.28
CDKL1-201ENST00000216378 RFX7Q2KHR2 1363 aa13.32□□□□□ -0.28
CDKL1-201ENST00000216378 RNF113AO15541 343 aaKnown RBP13.32□□□□□ -0.28
CDKL1-201ENST00000216378 MIGA2Q7L4E1 593 aa13.32□□□□□ -0.28
CDKL1-201ENST00000216378 CHST3Q7LGC8 479 aa13.32□□□□□ -0.28
CDKL1-201ENST00000216378 CCDC83Q8IWF9 413 aa13.32□□□□□ -0.28
CDKL1-201ENST00000216378 MRIQ9BWK5 157 aa13.32□□□□□ -0.28
CDKL1-201ENST00000216378 CYP2D6P10635 497 aa13.31□□□□□ -0.28
CDKL1-201ENST00000216378 HAND2P61296 217 aa13.31□□□□□ -0.28
CDKL1-201ENST00000216378 MCMDC2Q4G0Z9 681 aa13.31□□□□□ -0.28
CDKL1-201ENST00000216378 MCTP1Q6DN14 999 aa13.31□□□□□ -0.28
CDKL1-201ENST00000216378 DCPSQ96C86 337 aaKnown RBP13.31□□□□□ -0.28
CDKL1-201ENST00000216378 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.31□□□□□ -0.28
CDKL1-201ENST00000216378 CDK5RAP2Q96SN8 1893 aa13.31□□□□□ -0.28
CDKL1-201ENST00000216378 MYH7P12883 1935 aa13.31□□□□□ -0.28
CDKL1-201ENST00000216378 TEX11Q8IYF3 940 aa13.31□□□□□ -0.28
CDKL1-201ENST00000216378 CDCA5Q96FF9 252 aa13.31□□□□□ -0.28
CDKL1-201ENST00000216378 PASKQ96RG2 1323 aa13.31□□□□□ -0.28
CDKL1-201ENST00000216378 MAST2Q6P0Q8 1798 aa13.3□□□□□ -0.28
CDKL1-201ENST00000216378 MAGEB6P1A0A0J9YX57 407 aa13.3□□□□□ -0.28
CDKL1-201ENST00000216378 HIP1O00291 1037 aa13.3□□□□□ -0.28
CDKL1-201ENST00000216378 TRAK2O60296 914 aa13.3□□□□□ -0.28
CDKL1-201ENST00000216378 CYP21A2P08686 494 aa13.3□□□□□ -0.28
CDKL1-201ENST00000216378 UBE3CQ15386 1083 aa13.3□□□□□ -0.28
CDKL1-201ENST00000216378 ZMYM1Q5SVZ6 1142 aa13.3□□□□□ -0.28
CDKL1-201ENST00000216378 STK11IPQ8N1F8 1099 aa13.3□□□□□ -0.28
CDKL1-201ENST00000216378 ZC3H15Q8WU90 426 aaKnown RBP13.3□□□□□ -0.28
CDKL1-201ENST00000216378 FLT1P17948 1338 aa13.29□□□□□ -0.28
CDKL1-201ENST00000216378 DYNC1I1O14576 645 aa13.29□□□□□ -0.28
CDKL1-201ENST00000216378 PPP4CP60510 307 aa13.29□□□□□ -0.28
CDKL1-201ENST00000216378 STOX1Q6ZVD7 989 aa13.29□□□□□ -0.28
CDKL1-201ENST00000216378 CDC37L1Q7L3B6 337 aa13.29□□□□□ -0.28
CDKL1-201ENST00000216378 SULF1Q8IWU6 871 aa13.29□□□□□ -0.28
CDKL1-201ENST00000216378 NKX2-3Q8TAU0 364 aa13.29□□□□□ -0.28
CDKL1-201ENST00000216378 RBM46Q8TBY0 533 aaKnown RBP13.29□□□□□ -0.28
CDKL1-201ENST00000216378 STRBPQ96SI9 672 aaKnown RBP13.29□□□□□ -0.28
CDKL1-201ENST00000216378 EPB41L4AQ9HCS5 686 aaPredicted RBP13.29□□□□□ -0.28
CDKL1-201ENST00000216378 MKRN1Q9UHC7 482 aaKnown RBP13.29□□□□□ -0.28
CDKL1-201ENST00000216378 GPAA1O43292 621 aa13.29□□□□□ -0.28
CDKL1-201ENST00000216378 BAG4O95429 457 aaKnown RBP13.29□□□□□ -0.28
CDKL1-201ENST00000216378 ZKSCAN1P17029 563 aaPredicted RBP13.29□□□□□ -0.28
CDKL1-201ENST00000216378 FAM193AP78312 1265 aa13.29□□□□□ -0.28
CDKL1-201ENST00000216378 ST3GAL1Q11201 340 aa13.29□□□□□ -0.28
CDKL1-201ENST00000216378 RRP1BQ14684 758 aaKnown RBP13.29□□□□□ -0.28
CDKL1-201ENST00000216378 SMC1BQ8NDV3 1235 aa13.29□□□□□ -0.28
CDKL1-201ENST00000216378 TPCN1Q9ULQ1 816 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms