RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 DNAJA1P31689 397 aaKnown RBP12.39□□□□□ -0.43
APOBEC3D-201ENST00000216099 MCM5P33992 734 aa12.39□□□□□ -0.43
APOBEC3D-201ENST00000216099 LONRF3Q496Y0 759 aa12.39□□□□□ -0.43
APOBEC3D-201ENST00000216099 TBC1D9BQ66K14 1250 aa12.39□□□□□ -0.43
APOBEC3D-201ENST00000216099 PTF1AQ7RTS3 328 aa12.39□□□□□ -0.43
APOBEC3D-201ENST00000216099 NCOA7Q8NI08 942 aa12.39□□□□□ -0.43
APOBEC3D-201ENST00000216099 CCNL1Q9UK58 526 aaPredicted RBP12.39□□□□□ -0.43
APOBEC3D-201ENST00000216099 WWC3Q9ULE0 1092 aa12.39□□□□□ -0.43
APOBEC3D-201ENST00000216099 LAMB1P07942 1786 aa12.38□□□□□ -0.43
APOBEC3D-201ENST00000216099 ZNF213O14771 459 aa12.38□□□□□ -0.43
APOBEC3D-201ENST00000216099 GADD45BO75293 160 aaPredicted RBP12.38□□□□□ -0.43
APOBEC3D-201ENST00000216099 CDC37L1Q7L3B6 337 aa12.38□□□□□ -0.43
APOBEC3D-201ENST00000216099 NSUN7Q8NE18 718 aaKnown RBP12.38□□□□□ -0.43
APOBEC3D-201ENST00000216099 STRBPQ96SI9 672 aaKnown RBP12.38□□□□□ -0.43
APOBEC3D-201ENST00000216099 PANK2Q9BZ23 570 aa12.38□□□□□ -0.43
APOBEC3D-201ENST00000216099 METTL14Q9HCE5 456 aaKnown RBP12.38□□□□□ -0.43
APOBEC3D-201ENST00000216099 SALL1Q9NSC2 1324 aa12.38□□□□□ -0.43
APOBEC3D-201ENST00000216099 VAMP1P23763 118 aa12.38□□□□□ -0.43
APOBEC3D-201ENST00000216099 APOBRQ0VD83 1088 aa12.38□□□□□ -0.43
APOBEC3D-201ENST00000216099 CERKQ8TCT0 537 aa12.38□□□□□ -0.43
APOBEC3D-201ENST00000216099 FAM217BQ9NTX9 383 aaPredicted RBP12.38□□□□□ -0.43
APOBEC3D-201ENST00000216099 ZBTB12Q9Y330 459 aaPredicted RBP12.38□□□□□ -0.43
APOBEC3D-201ENST00000216099 RTCBQ9Y3I0 505 aaKnown RBP12.38□□□□□ -0.43
APOBEC3D-201ENST00000216099 PNPLA7Q6ZV29 1317 aa12.38□□□□□ -0.43
APOBEC3D-201ENST00000216099 DLEC1Q9Y238 1755 aa12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 ZPR1O75312 459 aa12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 PDIA3P30101 505 aaKnown RBP12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 KRT85P78386 507 aa12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 DNM1Q05193 864 aaKnown RBP12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 NAA16Q6N069 864 aaPredicted RBP12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 RAVER1Q8IY67 606 aaKnown RBP12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 SETDB2Q96T68 719 aa12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 LRRC2Q9BYS8 371 aa12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 AFF2P51816 1311 aa12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 CARMIL3Q8ND23 1372 aa12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 JAK2O60674 1132 aa12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 LETM1O95202 739 aaPredicted RBP12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 GNAT2P19087 354 aa12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 MEX3CQ5U5Q3 659 aaKnown RBP12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 C3orf67Q6ZVT6 689 aa12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 RALYLQ86SE5 291 aaKnown RBP12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 ACBD3Q9H3P7 528 aa12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 ZSCAN16Q9H4T2 348 aaPredicted RBP12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 GNL3LQ9NVN8 582 aaKnown RBP12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 PDS5AQ29RF7 1337 aaKnown RBP12.37□□□□□ -0.43
APOBEC3D-201ENST00000216099 PRC1O43663 620 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 CTDNEP1O95476 244 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 TBX4P57082 545 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 RESTQ13127 1097 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 PLEKHG6Q3KR16 790 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 CCDC183Q5T5S1 534 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 MAMSTRQ6ZN01 415 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 AIDAQ96BJ3 306 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 NBPF3Q9H094 633 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 IRF2BPLQ9H1B7 796 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 ALG2Q9H553 416 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 TRPC5Q9UL62 973 aaPredicted RBP12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 COL4A3BPQ9Y5P4 624 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 CCDC189A1A4V9 331 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 HOXA2O43364 376 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 ERCC3P19447 782 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 NASPP49321 788 aaPredicted RBP12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 BCAMP50895 628 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 HAND2P61296 217 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 FAM193AP78312 1265 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 DSG2Q14126 1118 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 FMNL3Q8IVF7 1028 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 MAGEB6Q8N7X4 407 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 FAM184AQ8NB25 1140 aa12.36□□□□□ -0.43
APOBEC3D-201ENST00000216099 PTPDC1A2A3K4 754 aa12.35□□□□□ -0.43
APOBEC3D-201ENST00000216099 FIBPO43427 364 aa12.35□□□□□ -0.43
APOBEC3D-201ENST00000216099 KCNQ4P56696 695 aa12.35□□□□□ -0.43
APOBEC3D-201ENST00000216099 ANTXR2P58335 489 aa12.35□□□□□ -0.43
APOBEC3D-201ENST00000216099 TRDNQ13061 729 aa12.35□□□□□ -0.43
APOBEC3D-201ENST00000216099 SCAND2PQ9GZW5 306 aaPredicted RBP12.35□□□□□ -0.43
APOBEC3D-201ENST00000216099 TMX4Q9H1E5 349 aaPredicted RBP12.35□□□□□ -0.43
APOBEC3D-201ENST00000216099 SRP68Q9UHB9 627 aaKnown RBP12.35□□□□□ -0.43
APOBEC3D-201ENST00000216099 MINPP1Q9UNW1 487 aa12.35□□□□□ -0.43
APOBEC3D-201ENST00000216099 COL1A1P02452 1464 aaPredicted RBP12.35□□□□□ -0.43
APOBEC3D-201ENST00000216099 SYCE3A1L190 88 aa12.35□□□□□ -0.43
APOBEC3D-201ENST00000216099 TPTE2Q6XPS3 522 aa12.35□□□□□ -0.43
APOBEC3D-201ENST00000216099 TSHZ1Q6ZSZ6 1077 aa12.35□□□□□ -0.43
APOBEC3D-201ENST00000216099 NBPF5PQ86XG9 351 aaPredicted RBP12.35□□□□□ -0.43
APOBEC3D-201ENST00000216099 NLRP3Q96P20 1036 aa12.35□□□□□ -0.43
APOBEC3D-201ENST00000216099 PPP1R9BQ96SB3 815 aa12.35□□□□□ -0.43
APOBEC3D-201ENST00000216099 ANKRD2Q9GZV1 360 aa12.35□□□□□ -0.43
APOBEC3D-201ENST00000216099 CDHR5Q9HBB8 845 aa12.35□□□□□ -0.43
APOBEC3D-201ENST00000216099 BAZ2AQ9UIF9 1905 aaKnown RBP12.34□□□□□ -0.43
APOBEC3D-201ENST00000216099 SNAP23O00161 211 aa12.34□□□□□ -0.43
APOBEC3D-201ENST00000216099 DHX16O60231 1041 aaKnown RBP12.34□□□□□ -0.43
APOBEC3D-201ENST00000216099 MBD4O95243 580 aa12.34□□□□□ -0.43
APOBEC3D-201ENST00000216099 CCDC173Q0VFZ6 552 aa12.34□□□□□ -0.43
APOBEC3D-201ENST00000216099 ZNF211Q13398 564 aaPredicted RBP12.34□□□□□ -0.43
APOBEC3D-201ENST00000216099 METTL16Q86W50 562 aaKnown RBP12.34□□□□□ -0.43
APOBEC3D-201ENST00000216099 TSPYL2Q9H2G4 693 aaPredicted RBP12.34□□□□□ -0.43
APOBEC3D-201ENST00000216099 PDCL3Q9H2J4 239 aa12.34□□□□□ -0.43
APOBEC3D-201ENST00000216099 DUOX1Q9NRD9 1551 aa12.34□□□□□ -0.43
APOBEC3D-201ENST00000216099 MYH6P13533 1939 aa12.34□□□□□ -0.43
APOBEC3D-201ENST00000216099 H3BQV1 296 aa12.34□□□□□ -0.43
APOBEC3D-201ENST00000216099 CBLBQ13191 982 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms