RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 ARMT1Q9H993 441 aa23.22■■□□□ 1.31
RCN1-201ENST00000054950 ZCCHC17Q9NP64 241 aaKnown RBP23.22■■□□□ 1.31
RCN1-201ENST00000054950 FBXO2Q9UK22 296 aaPredicted RBP23.22■■□□□ 1.31
RCN1-201ENST00000054950 PRKAB2O43741 272 aa23.22■■□□□ 1.31
RCN1-201ENST00000054950 CASP1P29466 404 aa23.22■■□□□ 1.31
RCN1-201ENST00000054950 KIF6Q6ZMV9 814 aa23.22■■□□□ 1.31
RCN1-201ENST00000054950 OXER1Q8TDS5 423 aa23.22■■□□□ 1.31
RCN1-201ENST00000054950 CCDC34Q96HJ3 373 aa23.22■■□□□ 1.31
RCN1-201ENST00000054950 ZSWIM4Q9H7M6 989 aa23.22■■□□□ 1.31
RCN1-201ENST00000054950 VGLL2Q8N8G2 317 aa23.21■■□□□ 1.31
RCN1-201ENST00000054950 ASAP1Q9ULH1 1129 aa23.21■■□□□ 1.31
RCN1-201ENST00000054950 ABCC12Q96J65 1359 aa23.21■■□□□ 1.31
RCN1-201ENST00000054950 MBD4O95243 580 aa23.21■■□□□ 1.31
RCN1-201ENST00000054950 ZNF18P17022 549 aa23.21■■□□□ 1.31
RCN1-201ENST00000054950 UBE3CQ15386 1083 aa23.21■■□□□ 1.31
RCN1-201ENST00000054950 SPECC1LQ69YQ0 1117 aa23.21■■□□□ 1.31
RCN1-201ENST00000054950 SGMS1Q86VZ5 419 aa23.21■■□□□ 1.31
RCN1-201ENST00000054950 DHX58Q96C10 678 aa23.21■■□□□ 1.31
RCN1-201ENST00000054950 TEX13AQ9BXU3 409 aaPredicted RBP23.21■■□□□ 1.31
RCN1-201ENST00000054950 MRPL44Q9H9J2 332 aaKnown RBP23.21■■□□□ 1.31
RCN1-201ENST00000054950 PRDM11Q9NQV5 511 aa23.21■■□□□ 1.31
RCN1-201ENST00000054950 ATRNO75882 1429 aa23.21■■□□□ 1.31
RCN1-201ENST00000054950 FMNL1O95466 1100 aaPredicted RBP23.2■■□□□ 1.3
RCN1-201ENST00000054950 MMP1P03956 469 aa23.2■■□□□ 1.3
RCN1-201ENST00000054950 PPP2R3AQ06190 1150 aa23.2■■□□□ 1.3
RCN1-201ENST00000054950 IFNL3Q8IZI9 196 aa23.2■■□□□ 1.3
RCN1-201ENST00000054950 MAGEB6Q8N7X4 407 aa23.2■■□□□ 1.3
RCN1-201ENST00000054950 KIFC2Q96AC6 838 aa23.2■■□□□ 1.3
RCN1-201ENST00000054950 PLA2G12BQ9BX93 195 aa23.2■■□□□ 1.3
RCN1-201ENST00000054950 FCHSD1Q86WN1 690 aa23.2■■□□□ 1.3
RCN1-201ENST00000054950 NAPBQ9H115 298 aa23.2■■□□□ 1.3
RCN1-201ENST00000054950 FAM205CA6NFA0 338 aa23.19■■□□□ 1.3
RCN1-201ENST00000054950 SOWAHDA6NJG2 315 aa23.19■■□□□ 1.3
RCN1-201ENST00000054950 TEX33O43247 280 aa23.19■■□□□ 1.3
RCN1-201ENST00000054950 TBC1D8O95759 1140 aa23.19■■□□□ 1.3
RCN1-201ENST00000054950 MAP3K9P80192 1104 aa23.19■■□□□ 1.3
RCN1-201ENST00000054950 SMARCE1Q969G3 411 aa23.19■■□□□ 1.3
RCN1-201ENST00000054950 SRRTQ9BXP5 876 aaKnown RBP23.19■■□□□ 1.3
RCN1-201ENST00000054950 MRFAP1Q9Y605 127 aa23.19■■□□□ 1.3
RCN1-201ENST00000054950 ANKRD18BA2A2Z9 1011 aa23.19■■□□□ 1.3
RCN1-201ENST00000054950 CYP2C19P33261 490 aa23.19■■□□□ 1.3
RCN1-201ENST00000054950 STRN4Q9NRL3 753 aa23.19■■□□□ 1.3
RCN1-201ENST00000054950 TBC1D2BQ9UPU7 963 aa23.19■■□□□ 1.3
RCN1-201ENST00000054950 PAPPAQ13219 1627 aa23.19■■□□□ 1.3
RCN1-201ENST00000054950 SPATA31A3Q5VYP0 1347 aa23.18■■□□□ 1.3
RCN1-201ENST00000054950 WDR17Q8IZU2 1322 aa23.18■■□□□ 1.3
RCN1-201ENST00000054950 PTPREP23469 700 aa23.18■■□□□ 1.3
RCN1-201ENST00000054950 CTSWP56202 376 aa23.18■■□□□ 1.3
RCN1-201ENST00000054950 STX17P56962 302 aa23.18■■□□□ 1.3
RCN1-201ENST00000054950 TTF1Q15361 905 aaPredicted RBP23.18■■□□□ 1.3
RCN1-201ENST00000054950 KLHL10Q6JEL2 608 aa23.18■■□□□ 1.3
RCN1-201ENST00000054950 CPLX3Q8WVH0 158 aa23.18■■□□□ 1.3
RCN1-201ENST00000054950 MPHOSPH8Q99549 860 aa23.18■■□□□ 1.3
RCN1-201ENST00000054950 CCDC66A2RUB6 948 aa23.18■■□□□ 1.3
RCN1-201ENST00000054950 COBLO75128 1261 aa23.18■■□□□ 1.3
RCN1-201ENST00000054950 PDE8BO95263 885 aa23.18■■□□□ 1.3
RCN1-201ENST00000054950 TRIM28Q13263 835 aaKnown RBP23.18■■□□□ 1.3
RCN1-201ENST00000054950 MORC3Q14149 939 aa23.18■■□□□ 1.3
RCN1-201ENST00000054950 TAF3Q5VWG9 929 aa23.18■■□□□ 1.3
RCN1-201ENST00000054950 CC2D1AQ6P1N0 951 aaPredicted RBP23.18■■□□□ 1.3
RCN1-201ENST00000054950 NLRP10Q86W26 655 aa23.18■■□□□ 1.3
RCN1-201ENST00000054950 NEK11Q8NG66 645 aa23.18■■□□□ 1.3
RCN1-201ENST00000054950 TRERF1Q96PN7 1200 aa23.18■■□□□ 1.3
RCN1-201ENST00000054950 LZTFL1Q9NQ48 299 aa23.18■■□□□ 1.3
RCN1-201ENST00000054950 RAI14Q9P0K7 980 aa23.18■■□□□ 1.3
RCN1-201ENST00000054950 STX10O60499 249 aa23.17■■□□□ 1.3
RCN1-201ENST00000054950 ST5P78524 1137 aa23.17■■□□□ 1.3
RCN1-201ENST00000054950 NUP133Q8WUM0 1156 aa23.17■■□□□ 1.3
RCN1-201ENST00000054950 CSRNP2Q9H175 543 aa23.17■■□□□ 1.3
RCN1-201ENST00000054950 TNS2Q63HR2 1409 aa23.17■■□□□ 1.3
RCN1-201ENST00000054950 SMIM22K7EJ46 135 aa23.17■■□□□ 1.3
RCN1-201ENST00000054950 SARSP49591 514 aaKnown RBP23.17■■□□□ 1.3
RCN1-201ENST00000054950 CHD4Q14839 1912 aa23.16■■□□□ 1.3
RCN1-201ENST00000054950 A0A087X0B3 334 aa23.16■■□□□ 1.3
RCN1-201ENST00000054950 hCG_1642624A0A1W2PR95 340 aa23.16■■□□□ 1.3
RCN1-201ENST00000054950 IRS4O14654 1257 aaPredicted RBP23.16■■□□□ 1.3
RCN1-201ENST00000054950 IFNAR1P17181 557 aa23.16■■□□□ 1.3
RCN1-201ENST00000054950 SMYD4Q8IYR2 804 aaPredicted RBP23.16■■□□□ 1.3
RCN1-201ENST00000054950 CCDC12Q8WUD4 166 aaPredicted RBP23.16■■□□□ 1.3
RCN1-201ENST00000054950 CABP5Q9NP86 173 aa23.16■■□□□ 1.3
RCN1-201ENST00000054950 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.16■■□□□ 1.3
RCN1-201ENST00000054950 ACTN4O43707 911 aaKnown RBP23.16■■□□□ 1.3
RCN1-201ENST00000054950 LIFRP42702 1097 aa23.16■■□□□ 1.3
RCN1-201ENST00000054950 AFMP43652 599 aa23.16■■□□□ 1.3
RCN1-201ENST00000054950 SAFBQ15424 915 aaKnown RBP eCLIP23.16■■□□□ 1.3
RCN1-201ENST00000054950 RTN1Q16799 776 aa23.16■■□□□ 1.3
RCN1-201ENST00000054950 ENOX1Q8TC92 643 aaKnown RBP23.16■■□□□ 1.3
RCN1-201ENST00000054950 PARD6BQ9BYG5 372 aa23.16■■□□□ 1.3
RCN1-201ENST00000054950 TMOD3Q9NYL9 352 aa23.16■■□□□ 1.3
RCN1-201ENST00000054950 PATL2C9JE40 543 aaKnown RBP23.15■■□□□ 1.3
RCN1-201ENST00000054950 TFRCP02786 760 aaKnown RBP23.15■■□□□ 1.3
RCN1-201ENST00000054950 IL2RBP14784 551 aa23.15■■□□□ 1.3
RCN1-201ENST00000054950 OAS2P29728 719 aaKnown RBP23.15■■□□□ 1.3
RCN1-201ENST00000054950 GYS2P54840 703 aa23.15■■□□□ 1.3
RCN1-201ENST00000054950 GIGYF2Q6Y7W6 1299 aaKnown RBP23.15■■□□□ 1.3
RCN1-201ENST00000054950 SHISA4Q96DD7 197 aa23.15■■□□□ 1.3
RCN1-201ENST00000054950 STK36Q9NRP7 1315 aa23.15■■□□□ 1.3
RCN1-201ENST00000054950 NKX1-1Q15270 411 aaPredicted RBP23.15■■□□□ 1.3
RCN1-201ENST00000054950 MAP3K15Q6ZN16 1313 aa23.15■■□□□ 1.3
RCN1-201ENST00000054950 GSG1L2A8MUP6 293 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms