RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 AXIN2Q9Y2T1 843 aa11.69□□□□□ -0.54
NIPAL3-201ENST00000003912 C1orf167Q5SNV9 1468 aa11.69□□□□□ -0.54
NIPAL3-201ENST00000003912 ICA1Q05084 483 aa11.69□□□□□ -0.54
NIPAL3-201ENST00000003912 ZSCAN10Q96SZ4 725 aaPredicted RBP11.69□□□□□ -0.54
NIPAL3-201ENST00000003912 GBP3Q9H0R5 595 aa11.69□□□□□ -0.54
NIPAL3-201ENST00000003912 PIM2Q9P1W9 311 aa11.69□□□□□ -0.54
NIPAL3-201ENST00000003912 GADL1Q6ZQY3 521 aa11.69□□□□□ -0.54
NIPAL3-201ENST00000003912 NLRX1Q86UT6 975 aa11.69□□□□□ -0.54
NIPAL3-201ENST00000003912 UBXN4Q92575 508 aa11.69□□□□□ -0.54
NIPAL3-201ENST00000003912 EDC3Q96F86 508 aaKnown RBP11.69□□□□□ -0.54
NIPAL3-201ENST00000003912 CCDC17Q96LX7 622 aa11.69□□□□□ -0.54
NIPAL3-201ENST00000003912 PAGR1Q9BTK6 254 aa11.69□□□□□ -0.54
NIPAL3-201ENST00000003912 CENPHQ9H3R5 247 aa11.69□□□□□ -0.54
NIPAL3-201ENST00000003912 CLTCQ00610 1675 aaKnown RBP11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 ZNF853P0CG23 659 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 TNNT1P13805 278 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 ARHGEF6Q15052 776 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 EHBP1Q8NDI1 1231 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 KIF18AQ8NI77 898 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 DBNDD1Q9H9R9 158 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 MRVI1Q9Y6F6 885 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 PTCH1Q13635 1447 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 DIP2CQ9Y2E4 1556 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 ARHGEF35A5YM69 484 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 SYT1P21579 422 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 TTC38Q5R3I4 469 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 HOOK3Q86VS8 718 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 SDR42E1Q8WUS8 393 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 PLIN2Q99541 437 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 PLVAPQ9BX97 442 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 NCOA5Q9HCD5 579 aaKnown RBP11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 SWAP70Q9UH65 585 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 CPSF1Q10570 1443 aaKnown RBP11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 CDC42BPBQ9Y5S2 1711 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 GNPTABQ3T906 1256 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 MYL10Q9BUA6 226 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 ELP1O95163 1332 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 CYLC1P35663 651 aaPredicted RBP11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 TXKP42681 527 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 DNA2P51530 1060 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 REXO1Q8N1G1 1221 aaKnown RBP11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 TM6SF1Q9BZW5 370 aa11.68□□□□□ -0.54
NIPAL3-201ENST00000003912 ABCB5Q2M3G0 1257 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 ANO6Q4KMQ2 910 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 MSANTD4Q8NCY6 345 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 TAOK3Q9H2K8 898 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 TTC12Q9H892 705 aaPredicted RBP11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 EXOC7Q9UPT5 735 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 MRPL11Q9Y3B7 192 aaKnown RBP11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 AGLP35573 1532 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 CAMSAP1Q5T5Y3 1602 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 GSTTP1A0A1W2PQM5 241 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 HSPA4P34932 840 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 GRIPAP1Q4V328 841 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 SUSD4Q5VX71 490 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 ZNF654Q8IZM8 581 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 FRMD4BQ9Y2L6 1034 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 USP31Q70CQ4 1352 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 DNM2P50570 870 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 VPS72Q15906 364 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 ZSCAN23Q3MJ62 389 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 ANO1Q5XXA6 986 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 CIAPIN1Q6FI81 312 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 NCAPH2Q6IBW4 605 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 ZSCAN30Q86W11 494 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 FAM200AQ8TCP9 573 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 ADCY5O95622 1261 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 MCM3P25205 808 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 STRN3Q13033 797 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 LRSAM1Q6UWE0 723 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 TAX1BP1Q86VP1 789 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 CDAN1Q8IWY9 1227 aa11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 NAA15Q9BXJ9 866 aaKnown RBP11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 BSDC1Q9NW68 430 aaPredicted RBP11.67□□□□□ -0.54
NIPAL3-201ENST00000003912 CCDC169A6NNP5 214 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 ACTN2P35609 894 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 MCF2L2Q86YR7 1114 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 FMNL3Q8IVF7 1028 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 M0QZ92 97 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 ADORA1P30542 326 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 HSPA1LP34931 641 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 TAF12Q16514 161 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 CSRNP1Q96S65 589 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 URI1O94763 535 aaPredicted RBP11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 HSPD1P10809 573 aaKnown RBP11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 ARMC9Q7Z3E5 817 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 FNBP1Q96RU3 617 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 MAP7D2Q96T17 732 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 COA1Q9GZY4 146 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 LRWD1Q9UFC0 647 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 CEP83Q9Y592 693 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 CLRN2A0PK11 232 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 KCNG1Q9UIX4 513 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 CEP152O94986 1710 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 USP17L3A6NCW0 530 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 USP17L4A6NCW7 530 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 ESPNB1AK53 854 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 USP17L1Q7RTZ2 530 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 PNMA1Q8ND90 353 aa11.66□□□□□ -0.54
NIPAL3-201ENST00000003912 COL15A1P39059 1388 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms