RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 Stac3Q8BZ71 360 aa12.52□□□□□ -0.4
Lig3-210ENSMUST00000173347 Dynll2Q9D0M5 89 aa12.52□□□□□ -0.4
Lig3-210ENSMUST00000173347 Telo2Q9DC40 840 aaKnown RBP12.52□□□□□ -0.4
Lig3-210ENSMUST00000173347 Tmem109Q3UBX0 243 aa12.52□□□□□ -0.4
Lig3-210ENSMUST00000173347 Pramel6Q810Y9 485 aa12.52□□□□□ -0.4
Lig3-210ENSMUST00000173347 Olfml1Q8BSH2 233 aa12.52□□□□□ -0.4
Lig3-210ENSMUST00000173347 CerkQ8K4Q7 531 aa12.52□□□□□ -0.4
Lig3-210ENSMUST00000173347 Chd1lQ9CXF7 900 aa12.52□□□□□ -0.4
Lig3-210ENSMUST00000173347 U2af2P26369 475 aaKnown RBP12.52□□□□□ -0.41
Lig3-210ENSMUST00000173347 Chrna5Q2MKA5 467 aa12.52□□□□□ -0.41
Lig3-210ENSMUST00000173347 Ccp110Q7TSH4 1004 aa12.52□□□□□ -0.41
Lig3-210ENSMUST00000173347 Ankrd13aQ80UP5 588 aa12.52□□□□□ -0.41
Lig3-210ENSMUST00000173347 Vps37dQ810I0 261 aa12.52□□□□□ -0.41
Lig3-210ENSMUST00000173347 Ubxn4Q8VCH8 506 aa12.52□□□□□ -0.41
Lig3-210ENSMUST00000173347 Ubac1Q8VDI7 409 aa12.52□□□□□ -0.41
Lig3-210ENSMUST00000173347 Ripk4Q9ERK0 786 aa12.52□□□□□ -0.41
Lig3-210ENSMUST00000173347 Slc27a1Q60714 646 aa12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Nell2Q61220 819 aa12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Fxr1Q61584 677 aaKnown RBP12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Polr3gQ6NXY9 223 aa12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Snx13Q6PHS6 957 aa12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Kcnj14Q8JZN3 434 aa12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Ndufv1Q91YT0 464 aa12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Eif4enif1Q9EST3 983 aaKnown RBP12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Myoz2Q9JJW5 264 aa12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Usp17lbE9Q9U0 468 aa12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Ftl1P29391 183 aa12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Usp25P57080 1055 aa12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 LrmpQ60664 539 aa12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Glis3Q6XP49 780 aa12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Sec62Q8BU14 398 aaKnown RBP12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Gimap7Q8R379 293 aa12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Hnrnpul1Q8VDM6 859 aaKnown RBP12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Ampd3O08739 766 aa12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Tyro3P55144 880 aa12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Aak1Q3UHJ0 959 aa12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Clip2Q9Z0H8 1047 aa12.51□□□□□ -0.41
Lig3-210ENSMUST00000173347 Dock5B2RY04 1868 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Grem2O88273 168 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 XpcP51612 930 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 VrtnQ3SYK4 740 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Ncbp1Q3UYV9 790 aaKnown RBP12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Triml1Q8BVP1 470 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Xrcc4Q924T3 326 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Mtmr2Q9Z2D1 643 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Ces1aE9PYP1 563 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Fbxo41Q6NS60 873 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 IqcgQ80W32 419 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Prkag3Q8BGM7 489 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Prpf3Q922U1 683 aaKnown RBP12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Erich6bQ9D4S6 220 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Znf287Q9EQB9 759 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Add3Q9QYB5 706 aaKnown RBP12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Ccdc173A0JLY1 547 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Scg2Q03517 617 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Tango6Q8C3S2 1079 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Ttc27Q8CD92 847 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Trim11Q99PQ2 467 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Tulp1Q9Z273 543 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Mtcl1Q3UHU5 1945 aa12.5□□□□□ -0.41
Lig3-210ENSMUST00000173347 Fam186bD3Z420 943 aa12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 Usp53P15975 1069 aa12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 Rrp1P56183 494 aaKnown RBP12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 Gm36210A0A1B0GS00 229 aa12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 1700013D24RikQ0P521 120 aa12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 Ccdc162pQ0VG85 912 aa12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 Prom2Q3UUY6 835 aa12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 Ttc5Q99LG4 440 aa12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 Acot9Q9R0X4 439 aaKnown RBP12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 Col4a5Q63ZW6 1691 aa12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 Gm43638A0A0J9YU36 694 aa12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 A0A1Y7VML8 143 aa12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 Cyp3a25O09158 503 aa12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 Tpd52l1O54818 204 aa12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 Fam178bQ24JP3 464 aa12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 Kmt5bQ3U8K7 883 aa12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 Smc2Q8CG48 1191 aaKnown RBP12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 Slc51aQ8R000 340 aa12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 StrcQ8VIM6 1809 aa12.49□□□□□ -0.41
Lig3-210ENSMUST00000173347 Usp50Q6P8X6 390 aa12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 Pramel3A2AHA7 463 aa12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 Gm7903A2AWL1 463 aa12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 AV320801A2AWL3 467 aa12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 Gm15023L7MUB4 467 aa12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 Vmn2r68L7N2B3 851 aa12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 UncxO08934 530 aa12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 Clec11aO88200 328 aa12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 Eya3P97480 510 aa12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 Epha2Q03145 977 aa12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 Mboat7Q8CHK3 473 aa12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 Cdk8Q8R3L8 464 aa12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 Snw1Q9CSN1 536 aaKnown RBP12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 Tfcp2Q9ERA0 502 aa12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 Klhl34A2AI76 644 aa12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 Zscan25B2RX31 543 aa12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 Il7P10168 154 aa12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 Rec8Q8C5S7 591 aa12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 E4f1Q8CCE9 783 aa12.48□□□□□ -0.41
Lig3-210ENSMUST00000173347 Ifi207E9Q3L4 978 aa12.47□□□□□ -0.41
Lig3-210ENSMUST00000173347 GnaqP21279 359 aa12.47□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms