RNA–Protein interactions for RNA: ENSMUST00000171342.2

Rnf41-202, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-202ENSMUST00000171342 Znf667Q2TL60 609 aa11.32□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Slc27a1Q60714 646 aa11.32□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Fnbp4Q6ZQ03 1031 aa11.32□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Mical1Q8VDP3 1048 aa11.32□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Pcdhb5Q91XZ5 792 aa11.32□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ndufv1Q91YT0 464 aa11.32□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ano3A2AHL1 981 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ccng2O08918 344 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Usp5P56399 858 aaKnown RBP11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Slitrk3Q810B9 980 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Cdca8Q8BHX3 289 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Tomm22Q9CPQ3 142 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Yeats4Q9CR11 227 aaKnown RBP11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Sec23aQ01405 765 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 PcQ05920 1178 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Zfp202Q8C879 641 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Tbc1d23Q8K0F1 684 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Gimap7Q8R379 293 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 HibadhQ99L13 335 aaKnown RBP11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Trim11Q99PQ2 467 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Iqca1Q9CUL5 857 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Hip1rQ9JKY5 1068 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Myh2G3UW82 1942 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ccdc85cE9Q6B2 420 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Gm21969J3QJZ1 289 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Eif6O55135 245 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Il7P10168 154 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Pfkfb1P70266 471 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Gja5Q01231 358 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Rpusd2Q149F1 553 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ckap2Q3V1H1 664 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Map3k12Q60700 888 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Dusp10Q9ESS0 483 aa11.31□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Brpf3B2KF05 1204 aaKnown RBP11.3□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Mtx1P47802 317 aa11.3□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ift122Q6NWV3 1182 aa11.3□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Tacc1Q6Y685 774 aa11.3□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Cep120Q7TSG1 988 aa11.3□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ddrgk1Q80WW9 315 aa11.3□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Stxbp4Q9WV89 557 aa11.3□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Cspp1B2RX88 1205 aa11.3□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Atp2b1G5E829 1220 aa11.3□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Nfil3O08750 462 aa11.3□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Dapk3O54784 448 aa11.3□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Epha2Q03145 977 aa11.3□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Large2Q5XPT3 690 aa11.3□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Smc2Q8CG48 1191 aaKnown RBP11.3□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Snw1Q9CSN1 536 aaKnown RBP11.3□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Homer1Q9Z2Y3 366 aa11.3□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Stx1aO35526 288 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 DnttP09838 530 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Dusp9Q7TNL7 452 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Vps37dQ810I0 261 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Pla2g12bQ99P27 195 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ndufb9Q9CQJ8 179 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Heg1E9Q7X6 1337 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ampd3O08739 766 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Clec11aO88200 328 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Grem2O88273 168 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Calm1P0DP26 149 aaKnown RBP11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Calm2P0DP27 149 aaKnown RBP11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Calm3P0DP28 149 aaKnown RBP11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ftl1P29391 183 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Rrp1P56183 494 aaKnown RBP11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Tbc1d2bQ3U0J8 965 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Rc3h1Q4VGL6 1130 aaKnown RBP11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 AsnsQ61024 561 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Kif1bpQ6ZPU9 617 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ehd2Q8BH64 543 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Znf428Q8C1M2 176 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ush1cQ9ES64 910 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Hmgn5Q9JL35 406 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Cnpy2Q9QXT0 182 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ktn1Q61595 1327 aaKnown RBP11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Lrp5Q91VN0 1614 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Dhx8A2A4P0 1244 aaKnown RBP11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Becn1O88597 448 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ccdc162pQ0VG85 912 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Fhdc1Q3ULZ2 1149 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Prkag3Q8BGM7 489 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Luzp1Q8R4U7 1068 aaKnown RBP11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Wdr64Q9D565 1086 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Sel1lQ9Z2G6 790 aa11.29□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Gm43638A0A0J9YU36 694 aa11.28□□□□□ -0.6
Rnf41-202ENSMUST00000171342 KhnynQ80U38 671 aa11.28□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Mtmr2Q9Z2D1 643 aa11.28□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Myh7Q91Z83 1935 aa11.28□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Esyt2Q3TZZ7 845 aa11.28□□□□□ -0.6
Rnf41-202ENSMUST00000171342 C87499Q3UX49 493 aa11.28□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Cyp4x1Q6A152 507 aa11.28□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Dnaaf2Q8BPI1 814 aa11.28□□□□□ -0.6
Rnf41-202ENSMUST00000171342 GdaQ9R111 454 aa11.28□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Myh4Q5SX39 1939 aa11.28□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ces1aE9PYP1 563 aa11.27□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Stag2O35638 1231 aa11.27□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Eya3P97480 510 aa11.27□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Fam89aQ14BJ1 175 aa11.27□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Tcp11l1Q8BTG3 509 aa11.27□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ppm1fQ8CGA0 452 aa11.27□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Nod2Q8K3Z0 1020 aa11.27□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms