RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Nlrp9aQ66X03 949 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Taf5lQ91WQ5 589 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Arfgap2Q99K28 520 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Prc1Q99K43 603 aaKnown RBP13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Add3Q9QYB5 706 aaKnown RBP13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Kif24Q6NWW5 1356 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Hfm1D3Z4R1 1434 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Cyp26a1O55127 497 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Abcb4P21440 1276 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Trip13Q3UA06 432 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 RragaQ80X95 313 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 NelfbQ8C4Y3 580 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Apol10aQ8CCA5 318 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Ccdc38Q8CDN8 563 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Ctage5Q8R311 779 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Galnt15Q9D2N8 638 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Lmtk2Q3TYD6 1471 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 ErmardE9Q048 622 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Tnnc1P19123 161 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Pdrg1P59048 133 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 MaeaQ4VC33 396 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Naa35Q6PHQ8 725 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Nek9Q8K1R7 984 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 AdpgkQ8VDL4 496 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Pcdhb5Q91XZ5 792 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Epb41l3Q9WV92 929 aa13.05□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Mast3Q3U214 1321 aa13.04□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Rab11fip4Q8BQP8 635 aa13.04□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Tmod2Q9JKK7 351 aa13.04□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Znf394Q9Z1D9 521 aa13.04□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Ncapd2Q8K2Z4 1392 aa13.04□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Wdr17E9Q271 1322 aa13.04□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Apol7aB2RT54 418 aa13.04□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Atp6v1aP50516 617 aaKnown RBP13.04□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Hspd1P63038 573 aaKnown RBP13.04□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Rtel1Q0VGM9 1203 aa13.04□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Sp4Q62445 782 aa13.04□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Ccdc14Q8K2J4 934 aa13.04□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Ginm1Q91WR6 327 aa13.04□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Dpf1Q9QX66 387 aa13.04□□□□□ -0.32
Ndc1-204ENSMUST00000139560 MthfslL7N466 203 aa13.04□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Zfp781Q0P5U5 243 aa13.04□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Nphp4P59240 1425 aa13.04□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Kif22Q3V300 660 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Ncoa5Q91W39 579 aaKnown RBP13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Appbp2Q9DAX9 585 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Skint5A7XUY5 1461 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Stox1B2RQL2 990 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 LtkP08923 888 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Gsta4P24472 222 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Mcm5P49718 733 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Rad23aP54726 363 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Foxd4Q60688 444 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Tbc1d31Q6NXY1 996 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Nek5Q7TSC3 627 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Pcdha7Q91Y13 937 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Ap1g2O88512 791 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Nap1l2P51860 460 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Ccdc114Q3UX62 658 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Sestd1Q80UK0 696 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Zfp174B9EJW5 407 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Sec24cG3X972 1096 aaKnown RBP13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Mroh9G5E8L9 891 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Yipf3Q3UDR8 347 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Lrrd1Q8C0R9 853 aa13.03□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Cep128Q8BI22 1102 aa13.02□□□□□ -0.32
Ndc1-204ENSMUST00000139560 4930449I24RikQ9D5E3 319 aa13.02□□□□□ -0.32
Ndc1-204ENSMUST00000139560 NapaQ9DB05 295 aa13.02□□□□□ -0.32
Ndc1-204ENSMUST00000139560 PzpQ61838 1495 aa13.02□□□□□ -0.32
Ndc1-204ENSMUST00000139560 Zfyve27Q3TXX3 415 aa13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Map3k12Q60700 888 aa13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 DbnlQ62418 436 aa13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Gpbp1Q6NXH3 473 aaKnown RBP13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Prpf40bQ80W14 870 aa13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Kiaa1524Q8BWY9 907 aa13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ccz1Q8C1Y8 480 aa13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Dph5Q9CWQ0 281 aa13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 CoblQ5NBX1 1337 aaKnown RBP13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ttll7A4Q9F0 912 aa13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Tbc1d2B1AVH7 922 aa13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Nck2O55033 380 aa13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Gnat2P50149 354 aa13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 HelqQ2VPA6 1069 aa13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Trim6Q8BGE7 488 aa13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Enox2Q8R0Z2 598 aa13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ccdc89Q9DA73 370 aa13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Cabp5Q9JLK3 173 aa13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Sh3tc1G3X9F6 1346 aa13.02□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Kif5cP28738 956 aaKnown RBP13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Card10P58660 1021 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Kif5bQ61768 963 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 NntQ61941 1086 aaKnown RBP13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Spa17Q62252 149 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ccpg1Q640L3 753 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Bzw2Q91VK1 419 aaKnown RBP13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Gbp2Q9Z0E6 589 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Syde2E9PUP1 1314 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Lrrc6O88978 473 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Plcb3P51432 1234 aaKnown RBP13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 GopcQ8BH60 463 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms