RNA–Protein interactions for RNA: ENSMUST00000113337.9

Ubr2-202, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ubr2, Length 7,633 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-202ENSMUST00000113337 Pik3caP42337 1068 aa17.4■□□□□ 0.38
Ubr2-202ENSMUST00000113337 Znf652Q5DU09 608 aa17.4■□□□□ 0.38
Ubr2-202ENSMUST00000113337 Krit1Q6S5J6 736 aa17.4■□□□□ 0.38
Ubr2-202ENSMUST00000113337 Plcd3Q8K2J0 785 aa17.4■□□□□ 0.38
Ubr2-202ENSMUST00000113337 Nlrp1bA1Z198 1177 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Art2bO35975 289 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Sparcl1P70663 650 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Cnnm4Q69ZF7 771 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Cspg5Q71M36 566 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 SdsQ8VBT2 327 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Slx4ipQ9D7Y9 413 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Krt27Q9Z320 448 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Ccdc85aQ5SP85 500 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Itih3Q61704 889 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Olfm5Q8BU90 496 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Scyl2Q8CFE4 930 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 A0A1W2P7S8 802 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Cdc5lQ6A068 802 aaKnown RBP17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Ophn1Q99J31 802 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Kif2aP28740 705 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Trpc6Q61143 930 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Sdad1Q80UZ2 687 aaKnown RBP17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Mapkapk5O54992 473 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Snrpa1P57784 255 aaKnown RBP17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Tpd52Q62393 224 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Cabs1Q8C633 391 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Rdm1Q9CQK3 281 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Dbn1Q9QXS6 706 aa17.39■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Terf2O35144 541 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Gnl3Q8CI11 538 aaKnown RBP17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Polr2dQ9D7M8 142 aaKnown RBP17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Ccdc70Q9D9B0 223 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Apol11aE9PZG0 334 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Pdia3P27773 505 aaKnown RBP17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Palm2Q8BR92 376 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Rapgef5Q8C0Q9 814 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 CalcaP70160 136 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Ccdc33Q3ULW6 985 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Zbtb45Q52KG4 520 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Arhgef2Q60875 985 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Dclk2Q6PGN3 756 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Kif21aQ9QXL2 1672 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Prdm1Q60636 856 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 SufuQ9Z0P7 484 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Sall3Q62255 1320 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Ccdc153P0C7Q1 202 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Myl10Q62082 202 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Krt5Q922U2 580 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Chd1lQ9CXF7 900 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Krt71Q9R0H5 524 aa17.38■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Apol7bB1AQP7 369 aa17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Pank2Q3U4S0 443 aa17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Lrrc43Q3V0L5 667 aa17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Idi2Q8BFZ6 227 aa17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Nudcd3Q8R1N4 363 aa17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Trim66Q924W6 1242 aa17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Lonp2Q9DBN5 852 aa17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Grm1P97772 1199 aa17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Wdr36Q3TAQ9 899 aaKnown RBP17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Ift20Q61025 132 aa17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Lmbrd2Q8C561 694 aa17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Dbndd1Q9CZ00 160 aa17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Rmdn1Q9DCV4 305 aa17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Ndufab1Q9CR21 156 aa17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Gm10110D3Z5M2 615 aa17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Cetn3O35648 167 aa17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 LdhaP06151 332 aaKnown RBP17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Pfdn4Q3UWL8 134 aa17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Ccdc154Q6RUT8 657 aa17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 FanclQ9CR14 375 aa17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 SarnpQ9D1J3 210 aaKnown RBP17.37■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Stk10O55098 966 aa17.36■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Cfap157Q0VFX2 523 aa17.36■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Myo1gQ5SUA5 1024 aa17.36■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Dph5Q9CWQ0 281 aa17.36■□□□□ 0.37
Ubr2-202ENSMUST00000113337 DohhA0A1Y7VJ29 135 aa17.36■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Tuft1O08970 390 aa17.36■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Trim7Q923T7 510 aa17.36■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Proca1B0QZF7 307 aa17.36■□□□□ 0.37
Ubr2-202ENSMUST00000113337 MpndQ3TV65 487 aa17.36■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Rad17Q6NXW6 688 aa17.36■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Suds3Q8BR65 328 aa17.36■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Hexim1Q8R409 356 aaKnown RBP17.36■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Mms19Q9D071 1031 aa17.36■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Herc4Q6PAV2 1057 aa17.36■□□□□ 0.37
Ubr2-202ENSMUST00000113337 1700013H16RikQ9DAC5 291 aa17.36■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Cdr2P97817 455 aa17.36■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Prr29B1ARI9 187 aa17.36■□□□□ 0.37
Ubr2-202ENSMUST00000113337 PaoxQ8C0L6 504 aa17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Gm5624F6ZZG8 207 aa17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Nkx1-2P42580 305 aa17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Cfap36Q8C6E0 343 aa17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Mroh9G5E8L9 891 aa17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Pfdn6Q03958 127 aa17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Gpbp1Q6NXH3 473 aaKnown RBP17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 PpanQ91YU8 470 aaKnown RBP17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 DeptorQ570Y9 409 aa17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Anks6Q6GQX6 883 aa17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 NapgQ9CWZ7 312 aa17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Atp12aQ9Z1W8 1035 aa17.35■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms