RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 Clec4gQ8BNX1 294 aa6.73□□□□□ -1.33
Vcan-203ENSMUST00000109546 Lin9Q8C735 542 aa6.73□□□□□ -1.33
Vcan-203ENSMUST00000109546 Cd209bQ8CJ91 325 aa6.73□□□□□ -1.33
Vcan-203ENSMUST00000109546 Abcf2Q99LE6 628 aaKnown RBP6.73□□□□□ -1.33
Vcan-203ENSMUST00000109546 Ino80bQ99PT3 375 aaKnown RBP6.73□□□□□ -1.33
Vcan-203ENSMUST00000109546 Atxn3Q9CVD2 355 aa6.73□□□□□ -1.33
Vcan-203ENSMUST00000109546 ErbinQ80TH2 1402 aa6.73□□□□□ -1.33
Vcan-203ENSMUST00000109546 Zfp444Q3TDV8 331 aaKnown RBP6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Slc10a4Q3UEZ8 437 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Znf830Q8R1N0 363 aaKnown RBP6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Khdc3Q9CWU5 440 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Gid8Q9D7M1 228 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Lzts3A2AHG0 700 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Serpinb3aG3X9V8 387 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Spg7Q3ULF4 781 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Cdca7lQ922M5 438 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Naa16Q9DBB4 864 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Klhl12Q8BZM0 568 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Sar1bQ9CQC9 198 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Krt20Q9D312 431 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Aox1O54754 1333 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Grin1P35438 938 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Rsad2Q8CBB9 362 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Flad1Q8R123 492 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Med21Q9CQ39 144 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 SsbP32067 415 aaKnown RBP6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Znf598Q80YR4 908 aaKnown RBP6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Nup107Q8BH74 926 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Brf1Q8CFK2 676 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Ccdc77Q9CZH8 489 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Rilpl1Q9JJC6 406 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Ttc41Q692V3 1318 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 OtulinQ3UCV8 352 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Smg7Q5RJH6 1138 aaKnown RBP6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Krit1Q6S5J6 736 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Tbc1d10bQ8BHL3 798 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 MrgbpQ9DAT2 204 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Erap1Q9EQH2 930 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Metap2O08663 478 aaKnown RBP6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Man1a2P39098 641 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Lamc2Q61092 1191 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Ppm1fQ8CGA0 452 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 GatbQ99JT1 557 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Cib4Q9D9N5 185 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Ppp2r3dQ9Z176 491 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Palm3A2TJV2 734 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Cpa2Q504N0 417 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 PsdQ5DTT2 1024 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Krt87Q6IMF0 495 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Mis18aQ9CZJ6 204 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Ctnna3Q65CL1 895 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Aldh1l1Q8R0Y6 902 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Sh2d4aQ9D7V1 421 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Ap1b1O35643 943 aaKnown RBP6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Lrrc6O88978 473 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Pdcd2P46718 343 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Arl13bQ640N2 427 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Snx13Q6PHS6 957 aa6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Eif2s1Q6ZWX6 315 aaKnown RBP6.72□□□□□ -1.33
Vcan-203ENSMUST00000109546 Slc3a2P10852 526 aaKnown RBP6.71□□□□□ -1.33
Vcan-203ENSMUST00000109546 Krt6aP50446 553 aa6.71□□□□□ -1.33
Vcan-203ENSMUST00000109546 Hsdl2Q2TPA8 490 aaKnown RBP6.71□□□□□ -1.33
Vcan-203ENSMUST00000109546 Olfm4Q3UZZ4 505 aa6.71□□□□□ -1.33
Vcan-203ENSMUST00000109546 Mtrf1Q8K126 446 aa6.71□□□□□ -1.33
Vcan-203ENSMUST00000109546 Mbd2Q9Z2E1 414 aa6.71□□□□□ -1.33
Vcan-203ENSMUST00000109546 Gm6121L7MUF1 212 aa6.71□□□□□ -1.33
Vcan-203ENSMUST00000109546 Bin1O08539 588 aaKnown RBP6.71□□□□□ -1.33
Vcan-203ENSMUST00000109546 Art2bO35975 289 aa6.71□□□□□ -1.33
Vcan-203ENSMUST00000109546 Puf60Q3UEB3 564 aaKnown RBP6.71□□□□□ -1.33
Vcan-203ENSMUST00000109546 P2rx5Q3UYI1 455 aa6.71□□□□□ -1.33
Vcan-203ENSMUST00000109546 Prpf38aQ4FK66 312 aaKnown RBP6.71□□□□□ -1.33
Vcan-203ENSMUST00000109546 Nme8Q715T0 586 aa6.71□□□□□ -1.33
Vcan-203ENSMUST00000109546 Catsper2A2ARP9 588 aa6.71□□□□□ -1.33
Vcan-203ENSMUST00000109546 Letm2Q7TNU7 480 aa6.71□□□□□ -1.33
Vcan-203ENSMUST00000109546 Batf3Q9D275 118 aa6.71□□□□□ -1.33
Vcan-203ENSMUST00000109546 Gtf3c6Q9D8P7 227 aa6.71□□□□□ -1.33
Vcan-203ENSMUST00000109546 Proca1B0QZF7 307 aa6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Itih3Q61704 889 aa6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Tmcc1Q69ZZ6 649 aa6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Lsm14bQ8CGC4 385 aaKnown RBP6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 BrapQ99MP8 591 aa6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 XpotQ9CRT8 963 aa6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Thap12Q9CUX1 758 aa6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Gm14525B1AZA0 212 aa6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 RpsaP14206 295 aaKnown RBP6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Gja8P28236 440 aa6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Erp29P57759 262 aaKnown RBP6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Trim56Q80VI1 734 aaKnown RBP6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Tmem87bQ8BKU8 555 aa6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Fkbp6Q91XW8 327 aa6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Traf7Q922B6 594 aa6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Vwa5aQ99KC8 793 aaKnown RBP6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Abtb1Q99LJ2 478 aa6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Gbp11A9YVJ5 442 aa6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Arhgap42B2RQE8 841 aa6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Cers3Q1A3B0 383 aa6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Trim36Q80WG7 729 aa6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Dach2Q925Q8 634 aa6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Ttc14Q9CSP9 761 aa6.71□□□□□ -1.34
Vcan-203ENSMUST00000109546 Zswim7Q9CWQ2 152 aa6.71□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms