RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Galnt15Q9D2N8 638 aa12.35□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Otud7bB2RUR8 840 aa12.35□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Snd1Q78PY7 910 aaKnown RBP12.35□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Map3k4O08648 1597 aa12.35□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Znf335A2A5K6 1337 aa12.35□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Rrp1P56183 494 aaKnown RBP12.35□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Sdccag8Q80UF4 717 aa12.35□□□□□ -0.43
Scn8a-203ENSMUST00000108908 PigbQ9JJQ0 542 aa12.35□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Plch2A2AP18 1501 aa12.35□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Diaph1O08808 1255 aa12.35□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Plcb3P51432 1234 aaKnown RBP12.35□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Krt9Q6RHW0 743 aa12.35□□□□□ -0.43
Scn8a-203ENSMUST00000108908 EhhadhQ9DBM2 718 aa12.35□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Myo3aQ8K3H5 1613 aa12.35□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Ddx31Q6NZQ2 687 aaKnown RBP12.35□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Hspa2P17156 633 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Opa1P58281 960 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Rps8P62242 208 aaKnown RBP12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Zbtb40Q6PCS8 1258 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Dclk3Q8BWQ5 790 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Dot1lQ6XZL8 1540 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Disp3A3KFU9 1347 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Lamc1P02468 1607 aaKnown RBP12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Il15P48346 162 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Zhx1P70121 873 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Bach1P97302 739 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Tex35Q14BK3 207 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Gzf1Q4VBD9 706 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Bend3Q6PAL0 825 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Dpp8Q80YA7 892 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Ssfa2Q922B9 1252 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Zcrb1Q9CZ96 217 aaKnown RBP12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Zbtb7aO88939 569 aaKnown RBP12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Herc4Q6PAV2 1057 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Sgsm2Q80U12 1005 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Cep128Q8BI22 1102 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Tnpo2Q99LG2 887 aaKnown RBP12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Stag1Q9D3E6 1258 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Gm28510A0A087WP28 240 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Gpr161B2RPY5 545 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Clec11aO88200 328 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 SpopQ6ZWS8 374 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Klhl20Q8VCK5 604 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Gdf11Q9Z1W4 405 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Stmn4P63042 189 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Atp1b3P97370 278 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Gbp8Q2V6D6 525 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Cdca7lQ922M5 438 aa12.34□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Copb2O55029 905 aa12.33□□□□□ -0.43
Scn8a-203ENSMUST00000108908 1700013D24RikQ0P521 120 aa12.33□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Mpp4Q6P7F1 635 aa12.33□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Spata24Q6P926 205 aa12.33□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Lzts2Q91YU6 671 aa12.33□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Rbm43Q99J64 343 aa12.33□□□□□ -0.43
Scn8a-203ENSMUST00000108908 LpxnQ99N69 386 aa12.33□□□□□ -0.43
Scn8a-203ENSMUST00000108908 DmtnQ9WV69 405 aa12.33□□□□□ -0.43
Scn8a-203ENSMUST00000108908 Cyp2j7A0A140T8U1 504 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Ap1b1O35643 943 aaKnown RBP12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Islr2Q5RKR3 745 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Zfp397Q7TNK4 527 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Trim6Q8BGE7 488 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Gys2Q8VCB3 704 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Trpc3Q9QZC1 836 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Ankrd35E9Q9D8 996 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Ehbp1Q69ZW3 1231 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Taf12Q8VE65 161 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 NapgQ9CWZ7 312 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Mroh7A2AVR2 1279 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Olfr247E9PVJ7 320 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Olfr819K7N727 320 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Hspd1P63038 573 aaKnown RBP12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Gbp1Q01514 589 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Krt19P19001 403 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Madcam1Q61826 405 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Tmem87aQ8BXN9 555 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Ccdc121E9Q6D3 323 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Me3Q8BMF3 604 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Elf2Q9JHC9 593 aa12.33□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Rreb1Q3UH06 1700 aaKnown RBP12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Tex13c2A0A0G2JGA3 530 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Cetn3O35648 167 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Pde11aP0C1Q2 933 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Atp1a3Q6PIC6 1013 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Nop56Q9D6Z1 580 aaKnown RBP12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Adarb2Q9JI20 745 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Tarbp1E9Q368 1579 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Parp14Q2EMV9 1817 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Rnf17Q99MV7 1640 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Speer4f2E9Q366 295 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Plbd2Q3TCN2 594 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Tubb4aQ9D6F9 444 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Clasp1Q80TV8 1535 aaKnown RBP12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Cep170Q6A065 1588 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Crybg3Q80W49 1005 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Uggt1Q6P5E4 1551 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Gm5935Q497S0 212 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 WaplQ65Z40 1200 aaKnown RBP12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Riox2Q8CD15 465 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Cfap57Q9D180 1249 aa12.32□□□□□ -0.44
Scn8a-203ENSMUST00000108908 Xpo4Q9ESJ0 1151 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms