RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Eif3cQ8R1B4 911 aaKnown RBP16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Znf394Q9Z1D9 521 aa16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Lmo7E9PYF4 1699 aaKnown RBP16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Cetn3O35648 167 aa16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Adgrb2Q8CGM1 1561 aa16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Hmgb2P30681 210 aaKnown RBP16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 VeztQ3ZK22 780 aa16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Ulbp1Q8HWA3 334 aa16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 GckrQ91X44 587 aa16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Ppp1r3fQ9JIG4 799 aa16.26■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Tmed1Q3V009 227 aa16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Jade3Q6IE82 823 aa16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Ppp2r5bQ6PD28 497 aa16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Spata16Q8C636 571 aa16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Pcdha7Q91Y13 937 aa16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 NgdnQ9DB96 315 aaKnown RBP16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 MefvQ9JJ26 767 aa16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Rgs12Q8CGE9 1381 aa16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Ttll7A4Q9F0 912 aa16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Dnm2P39054 870 aaKnown RBP16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Apol10aQ8CCA5 318 aa16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Slc5a4bQ91ZP4 660 aa16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Abcb4P21440 1276 aa16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Spg7Q3ULF4 781 aa16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Ccdc155Q80VJ8 648 aa16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Samd9lQ69Z37 1561 aa16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Lrrc74aA0A1Y7VMD6 494 aa16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Ccdc13D3YV10 709 aa16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Znf365Q8BG89 408 aa16.25■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Arhgap18Q8K0Q5 663 aa16.24■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Astn2Q80Z10 1352 aa16.24■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Lrrc23O35125 340 aa16.24■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 SpertQ32MG2 446 aa16.24■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Nr1d1Q3UV55 615 aa16.24■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 HellsQ60848 821 aa16.24■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Tubgcp2Q921G8 905 aa16.24■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Parp2O88554 559 aa16.24■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Prune1Q8BIW1 454 aa16.24■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Msh6P54276 1358 aaKnown RBP16.24■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Atp6v0a2P15920 856 aa16.24■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Ccz1Q8C1Y8 480 aa16.24■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Slc5a1Q8C3K6 665 aa16.24■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Apbb1ipQ8R5A3 670 aa16.24■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Rrbp1Q99PL5 1605 aaKnown RBP16.24■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Kif1bpQ6ZPU9 617 aa16.23■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Lrrc2Q8VDB8 371 aa16.23■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Klf15Q9EPW2 415 aa16.23■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Scaf11E9PZM7 1456 aaKnown RBP16.23■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Tbc1d2B1AVH7 922 aa16.23■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Cct6aP80317 531 aaKnown RBP16.23■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Atp2a1Q8R429 994 aa16.23■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Pdcd6ipQ9WU78 869 aaKnown RBP16.23■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Aox2Q5SGK3 1345 aa16.23■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Gna11P21278 359 aa16.23■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Aifm3Q3TY86 605 aa16.23■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Nap1l4Q78ZA7 375 aaKnown RBP16.23■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Rassf6Q80UQ2 353 aa16.23■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 ErmapQ9JLN5 566 aa16.23■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Ica1lQ3TY65 431 aa16.23■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Lonp1Q8CGK3 949 aaKnown RBP16.23■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Nek9Q8K1R7 984 aa16.23■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 CutaQ9CQ89 177 aa16.23■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Mum1l1Q4VA55 681 aa16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Gtpbp10Q8K013 366 aa16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 HscbQ8K3A0 234 aa16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Ifih1Q8R5F7 1025 aa16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Tekt2Q922G7 430 aa16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Fam217aQ9D9W6 419 aa16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Trpc3Q9QZC1 836 aa16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 CtifQ6PEE2 600 aaKnown RBP16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Lrrd1Q8C0R9 853 aa16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Tldc2A2ACG1 198 aa16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Bpifb4A2BGH0 617 aa16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Rapgef1Q3UHC1 1224 aa16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 AdarQ99MU3 1178 aaKnown RBP16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Mast3Q3U214 1321 aa16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 9230110C19RikQ8CC70 267 aa16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Ophn1Q99J31 802 aa16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Gm5936A2BG95 728 aa16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Gm5640A3KG49 728 aa16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Spocd1B1ASB6 936 aa16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 RpsaP14206 295 aaKnown RBP16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 E330017A01RikQ8BU47 192 aa16.22■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 ErmnQ5EBJ4 281 aa16.21■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Ccdc113Q8C5T8 377 aa16.21■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Gm10110D3Z5M2 615 aa16.21■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Ovgp1Q62010 721 aa16.21■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Ddx42Q810A7 929 aaKnown RBP16.21■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Q8CEZ4 452 aa16.21■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Tulp1Q9Z273 543 aa16.21■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Gm6121L7MUF1 212 aa16.21■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Ctnnd1P30999 938 aaKnown RBP16.21■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 S100a5P63084 93 aa16.21■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 SpopQ6ZWS8 374 aa16.21■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Rbm19Q8R3C6 952 aaKnown RBP16.21■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Nfe2l3Q9WTM4 660 aa16.21■□□□□ 0.19
Pcdha1-201ENSMUST00000070797 Serpinb6eI7HJI3 429 aa16.21■□□□□ 0.18
Pcdha1-201ENSMUST00000070797 Lrriq3Q14DL3 633 aa16.21■□□□□ 0.18
Pcdha1-201ENSMUST00000070797 Vps54Q5SPW0 977 aa16.21■□□□□ 0.18
Pcdha1-201ENSMUST00000070797 Lin9Q8C735 542 aa16.21■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms