RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Tbc1d30Q69ZT9 766 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Ccdc73Q8CDM4 1066 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Pde5aQ8CG03 865 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Wdr64Q9D565 1086 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 DonsonQ9QXP4 560 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Pdcd6ipQ9WU78 869 aaKnown RBP11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Rimbp3Q3V0F0 1606 aa11.05□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Prr5lA2AVJ5 370 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Api5O35841 504 aaKnown RBP11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 PparaP23204 468 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Smarcc1P97496 1104 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Pcdhb14Q6PB90 796 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Tmem59lQ7TNI2 337 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 PtprvP70289 1705 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Ms4a1P19437 291 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Stim1P70302 685 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Ccdc174Q3U155 467 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 CtifQ6PEE2 600 aaKnown RBP11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Snd1Q78PY7 910 aaKnown RBP11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Map3k11Q80XI6 850 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Csrnp2Q8BGQ2 534 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Haus7Q8BKT8 364 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Ankk1Q8BZ25 745 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 GdaQ9R111 454 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Nrxn3Q6P9K9 1571 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Palm3A2TJV2 734 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 EmbP21995 330 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 MarcksP26645 309 aaKnown RBP11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Zc3h6Q8BYK8 1177 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Matr3Q8K310 846 aaKnown RBP11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Cbx6Q9DBY5 414 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Letm1Q9Z2I0 738 aa11.04□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Gm42641I6L9G2 585 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Surf1P09925 306 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 AtripQ8BMG1 785 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Olfm5Q8BU90 496 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Brms1Q99N20 246 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Cyp2c23E9Q5K4 494 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Ccdc57Q6PHN1 1016 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Map10Q8BJS7 891 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Mylk2Q8VCR8 613 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 2310002L09RikQ9D7L5 217 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 PdclQ9DBX2 301 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Irs4Q9Z0Y7 1216 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 A0A1Y7VML8 143 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Grin1P35438 938 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Llgl2Q3TJ91 1027 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Lrrd1Q8C0R9 853 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Vps53Q8CCB4 832 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 RarsQ9D0I9 660 aaKnown RBP11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Galntl5Q9D4M9 431 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Egfl6Q9JJZ5 550 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Scn7aB1AYL1 1681 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Izumo3A6PWV3 263 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 CltaO08585 235 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Ncoa7Q6DFV7 943 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Usp49Q6P9L4 685 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Fam102bQ8BQS4 339 aa11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Cwc15Q9JHS9 229 aaKnown RBP11.03□□□□□ -0.64
Pcdh1-201ENSMUST00000057185 Gjc1P28229 396 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 PpardP35396 440 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Traf3ip1Q149C2 625 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Slc27a1Q60714 646 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Cdc37Q61081 379 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Fez2Q6TYB5 348 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Vps37dQ810I0 261 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Rufy1Q8BIJ7 712 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Ints4Q8CIM8 964 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Uchl5Q9WUP7 329 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Plbd2Q3TCN2 594 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Madcam1Q61826 405 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Edrf1Q6GQV7 1239 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Otop3Q80UF9 577 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Adck5Q80V03 582 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Ercc6lQ8BHK9 1240 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Emilin2Q8K482 1074 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Gm10134F6ZQC6 126 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Evi5P97366 809 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Arglu1Q3UL36 271 aaKnown RBP11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Susd4Q8BH32 490 aa11.02□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Sik3Q6P4S6 1311 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Pde11aP0C1Q2 933 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 1700013D24RikQ0P521 120 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Tmem109Q3UBX0 243 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Slc14a2Q8R4T9 930 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Smc1aQ9CU62 1233 aaKnown RBP11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Lztfl1Q9JHQ5 299 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Dlg5E9Q9R9 1921 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Krt24A1L317 512 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Stox1B2RQL2 990 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Foxp1P58462 705 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Hdgfl1Q2VPR5 283 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Igbp1Q61249 340 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Tekt3Q6X6Z7 490 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Gimap8Q75N62 688 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Ccdc181Q80ZU5 509 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 AbraQ8BUZ1 375 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Gtpbp4Q99ME9 634 aaKnown RBP11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Dbndd1Q9CZ00 160 aa11.01□□□□□ -0.65
Pcdh1-201ENSMUST00000057185 Telo2Q9DC40 840 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms