RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 Ncaph2Q8BSP2 607 aa10.46□□□□□ -0.73
Ccdc171-201ENSMUST00000053414 Setdb2Q8C267 713 aa10.46□□□□□ -0.73
Ccdc171-201ENSMUST00000053414 Zswim4Q8C7B8 1101 aa10.46□□□□□ -0.73
Ccdc171-201ENSMUST00000053414 Rbm17Q8JZX4 405 aaKnown RBP10.46□□□□□ -0.73
Ccdc171-201ENSMUST00000053414 Pcdhb3Q91XZ7 784 aa10.46□□□□□ -0.73
Ccdc171-201ENSMUST00000053414 Card14Q99KF0 999 aa10.46□□□□□ -0.73
Ccdc171-201ENSMUST00000053414 Gnl2Q99LH1 728 aaKnown RBP10.46□□□□□ -0.73
Ccdc171-201ENSMUST00000053414 Ppfia4B8QI36 1187 aa10.46□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Ap1g2O88512 791 aa10.46□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Bcl2l13P59017 434 aa10.46□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Sema4bQ62179 823 aa10.46□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Pwp2Q8BU03 919 aaKnown RBP10.46□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Pm20d1Q8C165 503 aa10.46□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Leng8Q8CBY3 785 aaKnown RBP10.46□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 BlmhQ8R016 455 aa10.46□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Tubb6Q922F4 447 aa10.46□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Bpifb6Q8BU51 449 aa10.46□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Tmc2Q8R4P4 888 aa10.46□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Erc1Q99MI1 1120 aa10.46□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 TnksQ6PFX9 1320 aa10.46□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Bicdl1A0JNT9 577 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Gm20425E9Q035 978 aaKnown RBP10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 LyarQ08288 388 aaKnown RBP10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Sco1Q5SUC9 284 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Klhl30Q8C3F7 581 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Krt222Q8CCX5 294 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Plekho1Q9JIY0 408 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Pde3aQ9Z0X4 1141 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Ugt1a8D3Z748 530 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Ugt1a10E9PXN7 530 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 MybP06876 636 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Sox5P35710 763 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Irf9Q61179 399 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Wdr64Q9D565 1086 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Ercc4Q9QZD4 917 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Cplx2P84086 134 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Ddb1Q3U1J4 1140 aaKnown RBP10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Ppp1r7Q3UM45 361 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Enox1Q8BHR2 643 aaKnown RBP10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Dnajc5gQ8C632 165 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Lrrc59Q922Q8 307 aaKnown RBP10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 RabggtaQ9JHK4 567 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Itga2bQ9QUM0 1033 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Col15a1O35206 1367 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Chp1P61022 195 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Ezh2Q61188 746 aaKnown RBP10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Antxr2Q6DFX2 487 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Clec16aQ80U30 1036 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Vps37dQ810I0 261 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Tmco3Q8BH01 678 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Hgh1Q8C3I8 393 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Ccdc12Q8R344 166 aaKnown RBP10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Thap2Q9D305 217 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Mfap3lQ9D3X9 409 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Uchl5Q9WUP7 329 aa10.45□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Rimbp3Q3V0F0 1606 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Gucy2cQ3UWA6 1072 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Ccdc114Q3UX62 658 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Fsd1Q7TPM6 496 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Zic5Q7TQ40 622 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Jmjd4Q8BFT6 427 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Vipas39Q8BGQ1 491 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Ttc12Q8BW49 704 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Tldc1Q8K0P3 455 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Eif3cQ8R1B4 911 aaKnown RBP10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Srgap2Q91Z67 1071 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Lrrc4bP0C192 709 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Jdp2P97875 163 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Krt42Q6IFX2 452 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Acnat2Q8BGG9 420 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Pms1Q8K119 917 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Q8VDP2 222 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Eps8l2Q99K30 729 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Ankrd1Q9CR42 319 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 SrprbP47758 269 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Kdm7aQ3UWM4 940 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Tpcn1Q9EQJ0 817 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Pdcd6ipQ9WU78 869 aaKnown RBP10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Myh3P13541 1940 aa10.44□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Meis3P97368 378 aa10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Plagl1Q9JLQ4 704 aa10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 ThegQ9JMB1 375 aa10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Kdm6aO70546 1401 aa10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Nap1l1P28656 391 aaKnown RBP10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Timm10P62073 90 aa10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Nyap1Q6PFX7 833 aa10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Rufy2Q8R4C2 606 aa10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Klhl40Q9D783 621 aa10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 CluhQ5SW19 1315 aa10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Iqsec3Q3TES0 1195 aa10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Rad17Q6NXW6 688 aa10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Xrcc4Q924T3 326 aa10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Arhgap33Q80YF9 1305 aa10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Ccdc33Q3ULW6 985 aa10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Snd1Q78PY7 910 aaKnown RBP10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 LarsQ8BMJ2 1178 aa10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Lrrc4cQ8C031 640 aa10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Lrrc2Q8VDB8 371 aa10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Ginm1Q91WR6 327 aa10.43□□□□□ -0.74
Ccdc171-201ENSMUST00000053414 Saal1Q9D2C2 474 aa10.43□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 10 ms