RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Cyp24a1Q64441 514 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 Ttc14Q9CSP9 761 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 Foxo3Q9WVH4 672 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 Prrc2bQ7TPM1 1486 aaKnown RBP10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 Gm10110D3Z5M2 615 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 Adam1aQ60813 791 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 Hirip3Q8BLH7 601 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 Trim68Q8K243 485 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 Cdca7lQ922M5 438 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 LpxnQ99N69 386 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 1700006A11RikB9EHI3 544 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 ZfxP17012 799 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 SkiQ60698 725 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 Bbs5Q9CZQ9 341 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 Azi2Q9QYP6 405 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 Krt71Q9R0H5 524 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 InsrrQ9WTL4 1300 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 CltaO08585 235 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 Mtss1lQ6P9S0 715 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 Nucks1Q80XU3 234 aaKnown RBP10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 Cct6aP80317 531 aaKnown RBP10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 Ppp1r12cQ3UMT1 782 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 RragaQ80X95 313 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 RbsnQ80Y56 783 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 Galnt15Q9D2N8 638 aa10.94□□□□□ -0.66
Syne1-201ENSMUST00000041639 EmbP21995 330 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Tmtc2Q56A06 836 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Ccdc189Q6NZQ0 333 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Nap1l4Q78ZA7 375 aaKnown RBP10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Stoml1Q8CI66 399 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Nlgn1Q99K10 843 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Phkg2Q9DB30 406 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Sox13Q04891 613 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Gm12185Q5NCB2 835 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Pym1Q8CHP5 203 aaKnown RBP10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Tubgcp2Q921G8 905 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Sap30bpQ02614 308 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Ccdc28aQ8CEI3 192 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Pak2Q8CIN4 524 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Rps6ka1P18653 724 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Pfkfb1P70266 471 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Sgsm2Q80U12 1005 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Dbndd1Q9CZ00 160 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 PxdnQ3UQ28 1475 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Proca1B0QZF7 307 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Gm38392E9Q2A2 434 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Ap1b1O35643 943 aaKnown RBP10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Enc1O35709 589 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Tdo2P48776 406 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 GabpaQ00422 454 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Map3k12Q60700 888 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Anks6Q6GQX6 883 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Cabp7Q91ZM8 215 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Atp6v0a4Q920R6 833 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Shroom2A2ALU4 1481 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Znf518aB2RRF6 1478 aaKnown RBP10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Large2Q5XPT3 690 aa10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Znf830Q8R1N0 363 aaKnown RBP10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Ddx41Q91VN6 622 aaKnown RBP10.93□□□□□ -0.66
Syne1-201ENSMUST00000041639 Rfc1P35601 1131 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Evi5P97366 809 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 VrtnQ3SYK4 740 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Lrrc43Q3V0L5 667 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Mybpc2Q5XKE0 1136 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Cacna2d2Q6PHS9 1154 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Atg3Q9CPX6 314 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Sar1bQ9CQC9 198 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Txnrd1Q9JMH6 613 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Sos2Q02384 1333 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Trove2O08848 538 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Ssx2ipQ8VC66 615 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Bmp2kQ91Z96 1138 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Tbc1d9bQ5SVR0 1263 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Tor4aQ8BH02 426 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Sec63Q8VHE0 760 aaKnown RBP10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Atad3Q925I1 591 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Myl7Q9QVP4 175 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Dpf1Q9QX66 387 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Adcy10Q8C0T9 1614 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Kif21aQ9QXL2 1672 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Mroh9G5E8L9 891 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Gm156Q58A37 223 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Wdr24Q8CFJ9 790 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Pcdhb2Q91Y00 799 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Skint5A7XUY5 1461 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Ccdc152E9PX14 254 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Map3k9Q3U1V8 1077 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Med10Q9CXU0 135 aa10.92□□□□□ -0.66
Syne1-201ENSMUST00000041639 Cyp26a1O55127 497 aa10.91□□□□□ -0.66
Syne1-201ENSMUST00000041639 Znf365Q8BG89 408 aa10.91□□□□□ -0.66
Syne1-201ENSMUST00000041639 Trerf1Q8BXJ2 1205 aa10.91□□□□□ -0.66
Syne1-201ENSMUST00000041639 Acot11Q8VHQ9 594 aa10.91□□□□□ -0.66
Syne1-201ENSMUST00000041639 Nxf1Q99JX7 618 aaKnown RBP10.91□□□□□ -0.66
Syne1-201ENSMUST00000041639 PdclQ9DBX2 301 aa10.91□□□□□ -0.66
Syne1-201ENSMUST00000041639 Lrrc8aQ80WG5 810 aa10.91□□□□□ -0.66
Syne1-201ENSMUST00000041639 Psmd6Q99JI4 389 aa10.91□□□□□ -0.66
Syne1-201ENSMUST00000041639 Bpifb4A2BGH0 617 aa10.91□□□□□ -0.66
Syne1-201ENSMUST00000041639 Ms4a1P19437 291 aa10.91□□□□□ -0.66
Syne1-201ENSMUST00000041639 Taok1Q5F2E8 1001 aa10.91□□□□□ -0.66
Syne1-201ENSMUST00000041639 Synpo2Q91YE8 1087 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 81.5 ms