RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Stag1Q9D3E6 1258 aa17.1■□□□□ 0.33
Nup54-201ENSMUST00000038514 Fbxo3Q9DC63 480 aa17.1■□□□□ 0.33
Nup54-201ENSMUST00000038514 Tbc1d8bA3KGB4 1114 aa17.1■□□□□ 0.33
Nup54-201ENSMUST00000038514 Kif3cO35066 796 aa17.1■□□□□ 0.33
Nup54-201ENSMUST00000038514 WtapQ9ER69 396 aa17.1■□□□□ 0.33
Nup54-201ENSMUST00000038514 Atp1a4Q9WV27 1032 aa17.1■□□□□ 0.33
Nup54-201ENSMUST00000038514 Stk39Q9Z1W9 556 aa17.1■□□□□ 0.33
Nup54-201ENSMUST00000038514 Map9Q3TRR0 646 aa17.09■□□□□ 0.33
Nup54-201ENSMUST00000038514 LarsQ8BMJ2 1178 aa17.09■□□□□ 0.33
Nup54-201ENSMUST00000038514 Nip7Q9CXK8 180 aaKnown RBP17.09■□□□□ 0.33
Nup54-201ENSMUST00000038514 Klhl40Q9D783 621 aa17.09■□□□□ 0.33
Nup54-201ENSMUST00000038514 EcsitQ9QZH6 435 aa17.09■□□□□ 0.33
Nup54-201ENSMUST00000038514 Vstm4T1NXB5 319 aa17.09■□□□□ 0.33
Nup54-201ENSMUST00000038514 Tpm3-rs7D3Z2H9 248 aa17.09■□□□□ 0.33
Nup54-201ENSMUST00000038514 Ubap1lG3UW59 384 aa17.09■□□□□ 0.33
Nup54-201ENSMUST00000038514 Gm4340L7N2C4 268 aa17.09■□□□□ 0.33
Nup54-201ENSMUST00000038514 Cd3dP04235 173 aa17.09■□□□□ 0.33
Nup54-201ENSMUST00000038514 Pbx1P41778 430 aa17.09■□□□□ 0.33
Nup54-201ENSMUST00000038514 Fam89aQ14BJ1 175 aa17.09■□□□□ 0.33
Nup54-201ENSMUST00000038514 Ift88Q61371 824 aa17.09■□□□□ 0.33
Nup54-201ENSMUST00000038514 Clic6Q8BHB9 596 aa17.09■□□□□ 0.33
Nup54-201ENSMUST00000038514 Amigo3Q8C2S7 508 aa17.09■□□□□ 0.33
Nup54-201ENSMUST00000038514 Vps53Q8CCB4 832 aa17.09■□□□□ 0.33
Nup54-201ENSMUST00000038514 Cep89Q9CZX2 791 aa17.09■□□□□ 0.33
Nup54-201ENSMUST00000038514 MetP16056 1379 aa17.08■□□□□ 0.33
Nup54-201ENSMUST00000038514 A0A1L1SQF0 893 aa17.08■□□□□ 0.33
Nup54-201ENSMUST00000038514 Krt24A1L317 512 aa17.08■□□□□ 0.33
Nup54-201ENSMUST00000038514 Trim34bJ3QNR8 485 aa17.08■□□□□ 0.33
Nup54-201ENSMUST00000038514 Emc10Q3TAS6 258 aa17.08■□□□□ 0.33
Nup54-201ENSMUST00000038514 Arglu1Q3UL36 271 aaKnown RBP17.08■□□□□ 0.33
Nup54-201ENSMUST00000038514 Ccdc12Q8R344 166 aaKnown RBP17.08■□□□□ 0.33
Nup54-201ENSMUST00000038514 Vps16Q920Q4 839 aa17.08■□□□□ 0.33
Nup54-201ENSMUST00000038514 MicalclQ9D5U9 680 aa17.08■□□□□ 0.33
Nup54-201ENSMUST00000038514 Lonp2Q9DBN5 852 aa17.08■□□□□ 0.33
Nup54-201ENSMUST00000038514 Pard3Q99NH2 1333 aa17.08■□□□□ 0.32
Nup54-201ENSMUST00000038514 Cul4bA2A432 970 aaKnown RBP17.08■□□□□ 0.32
Nup54-201ENSMUST00000038514 Btn2a2A4QPC6 514 aa17.08■□□□□ 0.32
Nup54-201ENSMUST00000038514 PnnO35691 725 aaKnown RBP17.08■□□□□ 0.32
Nup54-201ENSMUST00000038514 Lamb3Q61087 1168 aa17.08■□□□□ 0.32
Nup54-201ENSMUST00000038514 Cyp7a1Q64505 503 aa17.08■□□□□ 0.32
Nup54-201ENSMUST00000038514 Q66JV7 365 aa17.08■□□□□ 0.32
Nup54-201ENSMUST00000038514 Cyp4x1Q6A152 507 aa17.08■□□□□ 0.32
Nup54-201ENSMUST00000038514 Necab1Q8BG18 352 aa17.08■□□□□ 0.32
Nup54-201ENSMUST00000038514 Cadps2Q8BYR5 1297 aa17.08■□□□□ 0.32
Nup54-201ENSMUST00000038514 Zmynd15Q8C0R7 736 aa17.08■□□□□ 0.32
Nup54-201ENSMUST00000038514 Smc2Q8CG48 1191 aaKnown RBP17.08■□□□□ 0.32
Nup54-201ENSMUST00000038514 Taf6lQ8R2K4 616 aa17.08■□□□□ 0.32
Nup54-201ENSMUST00000038514 Iqca1Q9CUL5 857 aa17.08■□□□□ 0.32
Nup54-201ENSMUST00000038514 Scn11aQ9R053 1765 aa17.08■□□□□ 0.32
Nup54-201ENSMUST00000038514 PparaP23204 468 aa17.07■□□□□ 0.32
Nup54-201ENSMUST00000038514 Sox5P35710 763 aa17.07■□□□□ 0.32
Nup54-201ENSMUST00000038514 Kiaa1468Q148V7 1216 aa17.07■□□□□ 0.32
Nup54-201ENSMUST00000038514 Slc27a1Q60714 646 aa17.07■□□□□ 0.32
Nup54-201ENSMUST00000038514 Terb1Q8C0V1 768 aa17.07■□□□□ 0.32
Nup54-201ENSMUST00000038514 Lrrc59Q922Q8 307 aaKnown RBP17.07■□□□□ 0.32
Nup54-201ENSMUST00000038514 Pold4Q9CWP8 107 aa17.07■□□□□ 0.32
Nup54-201ENSMUST00000038514 FliiQ9JJ28 1271 aa17.07■□□□□ 0.32
Nup54-201ENSMUST00000038514 Snapc4Q8BP86 1333 aa17.07■□□□□ 0.32
Nup54-201ENSMUST00000038514 Map7d2A2AG50 781 aa17.07■□□□□ 0.32
Nup54-201ENSMUST00000038514 Slc4a4O88343 1079 aa17.07■□□□□ 0.32
Nup54-201ENSMUST00000038514 Il7P10168 154 aa17.07■□□□□ 0.32
Nup54-201ENSMUST00000038514 Mdh1P14152 334 aa17.07■□□□□ 0.32
Nup54-201ENSMUST00000038514 Eif5P59325 429 aaKnown RBP17.07■□□□□ 0.32
Nup54-201ENSMUST00000038514 Sval3Q76I99 144 aa17.07■□□□□ 0.32
Nup54-201ENSMUST00000038514 Tmco3Q8BH01 678 aa17.07■□□□□ 0.32
Nup54-201ENSMUST00000038514 ApobrQ8VBT6 942 aa17.07■□□□□ 0.32
Nup54-201ENSMUST00000038514 Tfcp2Q9ERA0 502 aa17.07■□□□□ 0.32
Nup54-201ENSMUST00000038514 CluhQ5SW19 1315 aa17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 Ces1hD3Z298 562 aa17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 CrcpO35427 148 aa17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 Fkbp1aP26883 108 aaKnown RBP17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 Pram1Q6BCL1 675 aa17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 Adck5Q80V03 582 aa17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 Lrrd1Q8C0R9 853 aa17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 Tmx1Q8VBT0 278 aa17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 Smc1aQ9CU62 1233 aaKnown RBP17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 Plekho1Q9JIY0 408 aa17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 GdaQ9R111 454 aa17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 Phldb3E9QAF4 648 aa17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 Q3TYL0 343 aa17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 Gtpbp6Q3U6U5 514 aa17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 TxlnaQ6PAM1 554 aaKnown RBP17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 Fchsd1Q6PFY1 688 aa17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 Tbc1d5Q80XQ2 815 aa17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 Cep128Q8BI22 1102 aa17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 Efcab8Q8C9R9 203 aa17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 Bicdl2Q8CHW5 507 aa17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 Itga2bQ9QUM0 1033 aa17.06■□□□□ 0.32
Nup54-201ENSMUST00000038514 4931408C20RikE9PWP9 1381 aa17.05■□□□□ 0.32
Nup54-201ENSMUST00000038514 Traf1P39428 409 aa17.05■□□□□ 0.32
Nup54-201ENSMUST00000038514 LtbrP50284 415 aa17.05■□□□□ 0.32
Nup54-201ENSMUST00000038514 Rad23aP54726 363 aa17.05■□□□□ 0.32
Nup54-201ENSMUST00000038514 Adck2Q6NSR3 617 aa17.05■□□□□ 0.32
Nup54-201ENSMUST00000038514 Ube3cQ80U95 1083 aa17.05■□□□□ 0.32
Nup54-201ENSMUST00000038514 Dact1Q8R4A3 778 aa17.05■□□□□ 0.32
Nup54-201ENSMUST00000038514 Tab2Q99K90 693 aa17.05■□□□□ 0.32
Nup54-201ENSMUST00000038514 Speer4dL7N216 212 aa17.04■□□□□ 0.32
Nup54-201ENSMUST00000038514 Pde11aP0C1Q2 933 aa17.04■□□□□ 0.32
Nup54-201ENSMUST00000038514 Ppfibp1Q8C8U0 969 aaKnown RBP17.04■□□□□ 0.32
Nup54-201ENSMUST00000038514 BccipQ9CWI3 316 aa17.04■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms