RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Prr7Q3V0I2 269 aa13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Ccdc84Q4VA36 332 aaKnown RBP13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Fstl1Q62356 306 aa13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Exoc8Q6PGF7 716 aa13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Ttll4Q80UG8 1193 aa13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Cdk8Q8R3L8 464 aa13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Trex1Q91XB0 314 aa13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Eaf2Q91ZD6 262 aa13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Erc1Q99MI1 1120 aa13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Acot3Q9QYR7 432 aa13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Tnnt3Q9QZ47 272 aa13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Ripk3Q9QZL0 486 aa13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Col2a1P28481 1487 aa13.61□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Gm44503E9PYU5 387 aa13.6□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Sema3fO88632 785 aa13.6□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Arl14Q3SXC5 192 aa13.6□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Ncbp1Q3UYV9 790 aaKnown RBP13.6□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Fam170aQ66LM6 333 aa13.6□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Tex2Q6ZPJ0 1128 aaKnown RBP13.6□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Olfr118Q7TRJ6 321 aa13.6□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Otop3Q80UF9 577 aa13.6□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 AidaQ8C4Q6 305 aa13.6□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Vmn1r199Q8R280 367 aa13.6□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Dnaaf4Q8R368 420 aa13.6□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Gpsm2Q8VDU0 679 aa13.6□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Myh7Q91Z83 1935 aa13.59□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Ano3A2AHL1 981 aa13.59□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Armc3A2AU72 881 aa13.59□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Ppfia1B2RXQ2 1266 aa13.59□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Abl1P00520 1123 aa13.59□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Nkx1-2P42580 305 aa13.59□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Znf667Q2TL60 609 aa13.59□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Rc3h1Q4VGL6 1130 aaKnown RBP13.59□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Nek11Q8C0Q4 628 aa13.59□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Mbtps2Q8CHX6 515 aa13.59□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Syne4Q8CII8 388 aa13.59□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Rfc4Q99J62 364 aa13.59□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Prr14lE9Q7C4 1971 aa13.59□□□□□ -0.23
Ccdc28b-201ENSMUST00000030586 Cfap99A0A140LIX9 648 aa13.58□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Dennd3A2RT67 1274 aa13.58□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Mms22lB1AUR6 1238 aa13.58□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Pdia3P27773 505 aaKnown RBP13.58□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 NapbP28663 298 aa13.58□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Acsl1P41216 699 aa13.58□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Sept2P42208 361 aaKnown RBP13.58□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Olfm4Q3UZZ4 505 aa13.58□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Cyp4f37Q3V1F1 546 aa13.58□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Scnn1aQ61180 699 aa13.58□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Pde3bQ61409 1100 aa13.58□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 B4galnt3Q6L8S8 986 aa13.58□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Ttc12Q8BW49 704 aa13.58□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Nek4Q9Z1J2 792 aa13.58□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Myh6Q02566 1938 aaKnown RBP13.58□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Frmpd4A2AFR3 1320 aa13.58□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 SynrgQ5SV85 1306 aa13.58□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Ltbp2O08999 1813 aa13.57□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Palm3A2TJV2 734 aa13.57□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Ythdc1E9Q5K9 736 aaKnown RBP13.57□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Pde11aP0C1Q2 933 aa13.57□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Slc4a3P16283 1227 aa13.57□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Ptpn12P35831 775 aa13.57□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Hspa8P63017 646 aaKnown RBP13.57□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Mansc4Q3UU94 337 aa13.57□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Ehmt1Q5DW34 1296 aa13.57□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Dpp8Q80YA7 892 aa13.57□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 OplahQ8K010 1288 aa13.57□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Adam1bQ8R534 806 aa13.57□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Usp33Q8R5K2 909 aa13.57□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 MyocdQ8VIM5 935 aa13.57□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 RragcQ99K70 398 aa13.57□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Chmp5Q9D7S9 219 aa13.57□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Mkrn1Q9QXP6 481 aa13.57□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Myh14Q6URW6 2000 aa13.57□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Tbc1d8bA3KGB4 1114 aa13.56□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Btn2a2A4QPC6 514 aa13.56□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 DaxxO35613 739 aa13.56□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 FlgP11088 336 aa13.56□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Sema3eP70275 775 aa13.56□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Q3TYL0 343 aa13.56□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Zbtb39Q6PDK0 712 aa13.56□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Bri3bpQ8BXV2 253 aa13.56□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Rbm28Q8CGC6 750 aaKnown RBP13.56□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 PpatQ8CIH9 517 aa13.56□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 H2-Q4Q8HWB2 354 aa13.56□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Lrrfip2Q91WK0 415 aa13.56□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 CenppQ9CZ92 286 aa13.56□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Bub1bQ9Z1S0 1052 aa13.56□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Tcof1O08784 1320 aaKnown RBP13.56□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Myh2G3UW82 1942 aa13.56□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Cacna1fQ9JIS7 1985 aa13.56□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Rfpl4bJ3QPR6 266 aa13.55□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Hand2Q61039 217 aa13.55□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Sv2cQ69ZS6 727 aa13.55□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Ddx11Q6AXC6 880 aa13.55□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Podnl1Q6P3Y9 559 aa13.55□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Kank4Q6P9J5 1016 aa13.55□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Scfd2Q8BTY8 684 aa13.55□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Usp31E9Q6Y8 1344 aa13.55□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Phlpp2Q8BXA7 1320 aa13.55□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Fndc3c1Q6DFV6 1356 aa13.55□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms