RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 IkbkgO88522 412 aa12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 Atp6v0a2P15920 856 aa12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 Cplx4Q80WM3 160 aa12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 Cyp4f39Q8BGU0 532 aa12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 GptQ8QZR5 496 aa12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 Kcnh3Q9WVJ0 1095 aa12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 Calm1P0DP26 149 aaKnown RBP12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Calm2P0DP27 149 aaKnown RBP12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Calm3P0DP28 149 aaKnown RBP12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Eef2P58252 858 aaKnown RBP12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Senp1P59110 640 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Glg1Q61543 1175 aaKnown RBP12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Panx2Q6IMP4 677 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ift122Q6NWV3 1182 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Bend3Q6PAL0 825 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Maip1Q8BHE8 291 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 SdsQ8VBT2 327 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 2310002L09RikQ9D7L5 217 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Prl3d3A0A0M6L0J6 224 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Rsph10bE9PYQ0 876 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Heatr4E9Q357 955 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ms4a2P20490 235 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Eif4a1P60843 406 aaKnown RBP12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 SympkQ80X82 1284 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Haus1Q8BHX1 278 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Arhgap24Q8C4V1 747 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ubxn1Q922Y1 297 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Sept14Q9DA97 430 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Bfsp1A2AMT1 669 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Tpcn2Q8BWC0 731 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Kif17Q99PW8 1038 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Fsip1Q9D3V5 435 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Gm29094F6Q785 221 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Gm5624F6ZZG8 207 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ttll12Q3UDE2 639 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Nlrp2Q4PLS0 1046 aaKnown RBP12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ccdc113Q8C5T8 377 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 DymQ8CHY3 669 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Trim68Q8K243 485 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 MthfsQ9D110 203 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Actn2Q9JI91 894 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ehbp1l1Q99MS7 1716 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Akap12Q9WTQ5 1684 aa12.05□□□□□ -0.48
Ciita-201ENSMUST00000023147 Dennd3A2RT67 1274 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Gm4758L7N258 96 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Cd22P35329 862 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Larp6Q8BN59 492 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Efcab8Q8C9R9 203 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ccdc38Q8CDN8 563 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Nrbp1Q99J45 535 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Psmd6Q99JI4 389 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ribc1Q9D0B8 379 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Klhl40Q9D783 621 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Exoc3l2D3YUP5 789 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Tcerg1lQ3B807 590 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Eftud2O08810 971 aaKnown RBP12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Gna11P21278 359 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Eef1dP57776 281 aaKnown RBP12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Zbtb16Q3UQ17 673 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Sun3Q5SS91 320 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Rab34Q64008 259 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Nap1l4Q78ZA7 375 aaKnown RBP12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Pde5aQ8CG03 865 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Bicdl2Q8CHW5 507 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Trpm1Q2TV84 1622 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Abcc4E9Q236 1325 aa12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Gemin5Q8BX17 1502 aaKnown RBP12.04□□□□□ -0.48
Ciita-201ENSMUST00000023147 Kifc2O08672 792 aa12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ranbp1P34022 203 aaKnown RBP12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Mcm5P49718 733 aa12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Gnat2P50149 354 aa12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Pkp1P97350 728 aaKnown RBP12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Snd1Q78PY7 910 aaKnown RBP12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Cep83Q9D5R3 692 aa12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Mrpl12Q9DB15 201 aaKnown RBP12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Dnajc10Q9DC23 793 aa12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ppfia3P60469 1194 aa12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Nlrp1aQ2LKU9 1182 aa12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Wdr3Q8BHB4 942 aaKnown RBP12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Xpo5Q924C1 1204 aaKnown RBP12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Taf4E9QAP7 1042 aaKnown RBP12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Cracr2aQ3UP38 310 aa12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Cage1Q5IR70 849 aa12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ccdc157Q5SPX1 718 aa12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Atp1a3Q6PIC6 1013 aa12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ctdp1Q7TSG2 960 aa12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ccdc186Q8C9S4 917 aa12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 PpanQ91YU8 470 aaKnown RBP12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Fam213aQ9CYH2 218 aa12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Znf365Q8BG89 408 aa12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ccdc105Q9D4K7 499 aa12.03□□□□□ -0.48
Ciita-201ENSMUST00000023147 Gm4981Q3ULJ8 291 aa12.02□□□□□ -0.48
Ciita-201ENSMUST00000023147 Lrrc43Q3V0L5 667 aa12.02□□□□□ -0.48
Ciita-201ENSMUST00000023147 Gm5935Q497S0 212 aa12.02□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ppp2r2cQ8BG02 447 aa12.02□□□□□ -0.48
Ciita-201ENSMUST00000023147 Rtn1Q8K0T0 780 aa12.02□□□□□ -0.48
Ciita-201ENSMUST00000023147 Adcy3Q8VHH7 1145 aa12.02□□□□□ -0.48
Ciita-201ENSMUST00000023147 Vps33aQ9D2N9 598 aa12.02□□□□□ -0.48
Ciita-201ENSMUST00000023147 Lonp2Q9DBN5 852 aa12.02□□□□□ -0.48
Ciita-201ENSMUST00000023147 CemipQ8BI06 1361 aa12.02□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms