RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 Ccne2Q9Z238 404 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Cd3dP04235 173 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 XpcP51612 930 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Fam228bQ497Q6 232 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Gm2163Q6PCY5 473 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Ccdc82Q6PG04 518 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Ttll4Q80UG8 1193 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Ireb2Q811J3 963 aaKnown RBP9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Rbm33Q9CXK9 1231 aaKnown RBP9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Aldh1b1Q9CZS1 519 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Pkd2l2Q9JLG4 621 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Usp14Q9JMA1 493 aaKnown RBP9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Spef2Q8C9J3 1734 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 AW822073A0A0N4SUK1 652 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 VmacQ8BP01 174 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Gimap7Q8R379 293 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Vps16Q920Q4 839 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Svs3aF2Z472 265 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Cep112Q5PR68 954 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Larp6Q8BN59 492 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Ubn2Q80WC1 1314 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Cbx1P83917 185 aaKnown RBP9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Atg9aQ68FE2 551 aa9.05□□□□□ -0.96
Lig3-201ENSMUST00000021039 Nlrx1Q3TL44 975 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Dcaf15Q6PFH3 600 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Slc44a1Q6X893 653 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Cep120Q7TSG1 988 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Sulf1Q8K007 870 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Lrrc2Q8VDB8 371 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Q9D5Q8 446 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Ccdc112A0AUP1 442 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Rasa1E9PYG6 1038 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 ImpactO55091 318 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 WaplQ65Z40 1200 aaKnown RBP9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 BbxQ8VBW5 907 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Ccar2Q8VDP4 922 aaKnown RBP9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Rhpn1Q61085 643 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Acnat2Q8BGG9 420 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Styxl1Q9DAR2 321 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Sept9Q80UG5 583 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Cdca8Q8BHX3 289 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Fam13bQ8K2H3 851 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Matr3Q8K310 846 aaKnown RBP9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Lman1lQ8VCD3 505 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Ubac1Q8VDI7 409 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Cabp5Q9JLK3 173 aa9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Knop1Q9Z2Q2 478 aaKnown RBP9.04□□□□□ -0.96
Lig3-201ENSMUST00000021039 Clrn2B2RVW2 232 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Rad51bO35719 350 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Tdo2P48776 406 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Ube2hP62257 183 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Armc2Q3URY6 854 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Ccdc189Q6NZQ0 333 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Gpr101Q80T62 511 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Plcg2Q8CIH5 1265 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Znf496Q5SXI5 585 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Gbp4Q61107 620 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Sv2cQ69ZS6 727 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Ttll1Q91V51 423 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Nup153E9Q3G8 1462 aaKnown RBP9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Tfcp2l1Q3UNW5 479 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Themis2Q91YX0 663 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Rfc4Q99J62 364 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 IcoslgQ9JHJ8 322 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Sipa1l2Q80TE4 1722 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Slit2Q9R1B9 1521 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 FanccP50652 591 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 IqcgQ80W32 419 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 HlfQ8BW74 295 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 SdsQ8VBT2 327 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Xpo5Q924C1 1204 aaKnown RBP9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Cyp27a1Q9DBG1 533 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Cd274Q9EP73 290 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Pik3c2aQ61194 1686 aa9.03□□□□□ -0.96
Lig3-201ENSMUST00000021039 Kcnj4P52189 445 aa9.02□□□□□ -0.96
Lig3-201ENSMUST00000021039 EgfrQ01279 1210 aa9.02□□□□□ -0.96
Lig3-201ENSMUST00000021039 Ubxn2bQ0KL01 331 aa9.02□□□□□ -0.96
Lig3-201ENSMUST00000021039 Atxn2lQ7TQH0 1049 aaKnown RBP9.02□□□□□ -0.96
Lig3-201ENSMUST00000021039 Pknox2Q8BG99 474 aa9.02□□□□□ -0.96
Lig3-201ENSMUST00000021039 AdpgkQ8VDL4 496 aa9.02□□□□□ -0.96
Lig3-201ENSMUST00000021039 Gpr108Q91WD0 569 aa9.02□□□□□ -0.96
Lig3-201ENSMUST00000021039 Zbtb22Q9Z0G7 638 aa9.02□□□□□ -0.96
Lig3-201ENSMUST00000021039 Sdc2P43407 202 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Sptlc2P97363 560 aaKnown RBP9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Erich4Q3UNU4 136 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Usp37Q8C0R0 979 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Col23a1Q8K4G2 532 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Trmt112Q9DCG9 125 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Fam184aE9PW83 1143 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Phf23Q8BSN5 401 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Ccdc122Q8BVN0 290 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Smtnl1Q99LM3 459 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Calml3Q9D6P8 149 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Ugt1a5B2RT14 529 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 NpeppsQ11011 920 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Glis3Q6XP49 780 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Tex2Q6ZPJ0 1128 aaKnown RBP9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Tmco3Q8BH01 678 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Gps2Q921N8 327 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Kcnq2Q9Z351 759 aa9.02□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms