RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 A0A1W2P7Z8 802 aa17.31■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Gm9046A0A1W2P855 802 aa17.31■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Mtx1P47802 317 aa17.31■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Psen2Q61144 448 aa17.31■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Scnn1aQ61180 699 aa17.31■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Adgre1Q61549 931 aa17.31■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Zcwpw1Q6IR42 630 aa17.31■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Paf1Q8K2T8 535 aa17.31■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Ipo9Q91YE6 1041 aa17.31■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Znf287Q9EQB9 759 aa17.31■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Plxnb2B2RXS4 1842 aa17.31■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Atrnl1Q6A051 1378 aa17.31■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Clrn2B2RVW2 232 aa17.3■□□□□ 0.36
Ercc1-201ENSMUST00000003645 ChgaP26339 463 aaKnown RBP17.3■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Ftl1P29391 183 aa17.3■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Eif5P59325 429 aaKnown RBP17.3■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Sec23aQ01405 765 aa17.3■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Hps6Q8BLY7 805 aa17.3■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Terb1Q8C0V1 768 aa17.3■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Pms1Q8K119 917 aa17.3■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Tubb6Q922F4 447 aa17.3■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Txnrd2Q9JLT4 524 aa17.3■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Cry2Q9R194 592 aa17.3■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Fzd9Q9R216 592 aa17.3■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Eya3P97480 510 aa17.29■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Rc3h1Q4VGL6 1130 aaKnown RBP17.29■□□□□ 0.36
Ercc1-201ENSMUST00000003645 OplahQ8K010 1288 aa17.29■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Ppp1r11Q8K1L5 131 aa17.29■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Nup133Q8R0G9 1155 aa17.29■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Ubxn2aQ99KJ0 258 aa17.29■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Ptpn12P35831 775 aa17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Syt1P46096 421 aa17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Pip5kl1Q6U7H8 395 aa17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Tmem59lQ7TNI2 337 aa17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Pus7lQ8CE46 702 aa17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 BrapQ99MP8 591 aa17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Pes1Q9EQ61 584 aaKnown RBP17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Zcchc17Q9ESX4 241 aaKnown RBP17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 SisF8VQM5 1818 aa17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Mical3Q8CJ19 1993 aa17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Ythdc1E9Q5K9 736 aaKnown RBP17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Terf2O35144 541 aa17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Nmt2O70311 529 aa17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Usp53P15975 1069 aa17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Ncf1Q09014 390 aa17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Myl10Q62082 202 aa17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Exoc8Q6PGF7 716 aa17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Ppp1r10Q80W00 888 aaKnown RBP17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Pof1bQ8K4L4 587 aa17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Chmp4cQ9D7F7 232 aa17.28■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Vmn2r23E9PXI5 849 aa17.27■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Elmsan1E9Q2I4 1089 aaKnown RBP17.27■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Gm11437Q5QR91 290 aa17.27■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Fam196bQ6GQV1 535 aa17.27■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Slc9c1Q6UJY2 1175 aa17.27■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Tekt3Q6X6Z7 490 aa17.27■□□□□ 0.35
Ercc1-201ENSMUST00000003645 WtapQ9ER69 396 aa17.27■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Clip2Q9Z0H8 1047 aa17.27■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Fam205a1D3YZF6 1314 aa17.27■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Zmym2Q9CU65 1376 aa17.27■□□□□ 0.35
Ercc1-201ENSMUST00000003645 XdhQ00519 1335 aa17.26■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Prr16A3KMN5 304 aa17.26■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Fgl2P12804 432 aa17.26■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Atp6v1dP57746 247 aa17.26■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Brip1Q5SXJ3 1174 aa17.26■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Filip1lQ6P6L0 1131 aa17.26■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Dpp8Q80YA7 892 aa17.26■□□□□ 0.35
Ercc1-201ENSMUST00000003645 DlatQ8BMF4 642 aa17.26■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Igf2bp3Q9CPN8 579 aaKnown RBP17.26■□□□□ 0.35
Ercc1-201ENSMUST00000003645 B3galt4Q9Z0F0 371 aa17.26■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Zscan18E9PUD6 809 aa17.25■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Stat1P42225 749 aa17.25■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Rfx1P48377 963 aa17.25■□□□□ 0.35
Ercc1-201ENSMUST00000003645 CtshP49935 333 aa17.25■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Ddx19aQ61655 478 aaKnown RBP17.25■□□□□ 0.35
Ercc1-201ENSMUST00000003645 VmacQ8BP01 174 aa17.25■□□□□ 0.35
Ercc1-201ENSMUST00000003645 9230110C19RikQ8CC70 267 aa17.25■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Apbb1ipQ8R5A3 670 aa17.25■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Sirt2Q8VDQ8 389 aa17.25■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Snapc2Q91XA5 359 aa17.25■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Aldh1b1Q9CZS1 519 aa17.25■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Akap8Q9DBR0 687 aaKnown RBP17.25■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Ddx20Q9JJY4 825 aaKnown RBP17.25■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Scn10aQ6QIY3 1958 aa17.24■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Slc4a9E9PUP3 929 aa17.24■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Ppef1O35655 650 aa17.24■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Bace1P56818 501 aa17.24■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Ctdnep1Q3TP92 244 aa17.24■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Q3UJP5 209 aa17.24■□□□□ 0.35
Ercc1-201ENSMUST00000003645 D630036H23RikQ3UQD6 204 aa17.24■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Tmem130Q6NXM3 419 aa17.24■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Phf20l1Q8CCJ9 1013 aa17.24■□□□□ 0.35
Ercc1-201ENSMUST00000003645 GrapQ9CX99 217 aa17.24■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Cnpy3Q9DAU1 276 aa17.24■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Suclg2Q9Z2I8 433 aa17.24■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Cyp26a1O55127 497 aa17.23■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Sema3fO88632 785 aa17.23■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Mybl2P48972 704 aa17.23■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Sema3eP70275 775 aa17.23■□□□□ 0.35
Ercc1-201ENSMUST00000003645 Scg2Q03517 617 aa17.23■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 65.2 ms