RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Scn11aQ9R053 1765 aa18.8■□□□□ 0.6
Shh-201ENSMUST00000002708 1700029H14RikE9PY36 240 aa18.8■□□□□ 0.6
Shh-201ENSMUST00000002708 Mns1Q61884 491 aa18.8■□□□□ 0.6
Shh-201ENSMUST00000002708 Drc7Q6V3W6 876 aa18.8■□□□□ 0.6
Shh-201ENSMUST00000002708 Hps6Q8BLY7 805 aa18.8■□□□□ 0.6
Shh-201ENSMUST00000002708 Pla2g4bP0C871 782 aa18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 Gng11P61953 73 aa18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 Cnnm2Q3TWN3 875 aa18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 Gtpbp6Q3U6U5 514 aa18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 Ppp2r2cQ8BG02 447 aa18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 Tgs1Q923W1 853 aa18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 WtapQ9ER69 396 aa18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 Cd3dP04235 173 aa18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 Siah1aP61092 282 aa18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 Zc3h12cQ5DTV4 884 aa18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 Cyp24a1Q64441 514 aa18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 Otop3Q80UF9 577 aa18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 Sept9Q80UG5 583 aa18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 Olfm5Q8BU90 496 aa18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 Phf20l1Q8CCJ9 1013 aa18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 Sox30Q8CGW4 782 aa18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 Polr2dQ9D7M8 142 aaKnown RBP18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 Dctpp1Q9QY93 170 aa18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 Ktn1Q61595 1327 aaKnown RBP18.79■□□□□ 0.6
Shh-201ENSMUST00000002708 Myh15E9Q264 1925 aa18.78■□□□□ 0.6
Shh-201ENSMUST00000002708 Eif5P59325 429 aaKnown RBP18.78■□□□□ 0.6
Shh-201ENSMUST00000002708 Tada3Q8R0L9 432 aa18.78■□□□□ 0.6
Shh-201ENSMUST00000002708 Cnpy3Q9DAU1 276 aa18.78■□□□□ 0.6
Shh-201ENSMUST00000002708 Dennd3A2RT67 1274 aa18.78■□□□□ 0.6
Shh-201ENSMUST00000002708 Ccdc121E9Q6D3 323 aa18.78■□□□□ 0.6
Shh-201ENSMUST00000002708 NefhP19246 1090 aa18.78■□□□□ 0.6
Shh-201ENSMUST00000002708 Bag1Q60739 355 aa18.78■□□□□ 0.6
Shh-201ENSMUST00000002708 Ift122Q6NWV3 1182 aa18.78■□□□□ 0.6
Shh-201ENSMUST00000002708 Ttc12Q8BW49 704 aa18.78■□□□□ 0.6
Shh-201ENSMUST00000002708 Rtn1Q8K0T0 780 aa18.78■□□□□ 0.6
Shh-201ENSMUST00000002708 Vps16Q920Q4 839 aa18.78■□□□□ 0.6
Shh-201ENSMUST00000002708 Abl1P00520 1123 aa18.78■□□□□ 0.6
Shh-201ENSMUST00000002708 Stag1Q9D3E6 1258 aa18.78■□□□□ 0.6
Shh-201ENSMUST00000002708 Sycp2lA0A0M3U1B0 842 aa18.77■□□□□ 0.6
Shh-201ENSMUST00000002708 Zfp597E9Q6S0 419 aa18.77■□□□□ 0.6
Shh-201ENSMUST00000002708 Capn2O08529 700 aa18.77■□□□□ 0.6
Shh-201ENSMUST00000002708 Pex1Q5BL07 1284 aa18.77■□□□□ 0.6
Shh-201ENSMUST00000002708 Abcf1Q6P542 837 aaKnown RBP18.77■□□□□ 0.6
Shh-201ENSMUST00000002708 Asnsd1Q8BFS9 627 aa18.77■□□□□ 0.6
Shh-201ENSMUST00000002708 Nek3Q9R0A5 511 aa18.77■□□□□ 0.6
Shh-201ENSMUST00000002708 Fer1l6E0CZ42 1862 aa18.77■□□□□ 0.59
Shh-201ENSMUST00000002708 Pde11aP0C1Q2 933 aa18.77■□□□□ 0.59
Shh-201ENSMUST00000002708 Psmb7P70195 277 aa18.77■□□□□ 0.59
Shh-201ENSMUST00000002708 Ckap2Q3V1H1 664 aa18.77■□□□□ 0.59
Shh-201ENSMUST00000002708 Ncoa7Q6DFV7 943 aa18.77■□□□□ 0.59
Shh-201ENSMUST00000002708 AatfQ9JKX4 526 aaKnown RBP18.77■□□□□ 0.59
Shh-201ENSMUST00000002708 IntuQ059U7 942 aa18.76■□□□□ 0.59
Shh-201ENSMUST00000002708 Specc1lQ2KN98 1118 aaKnown RBP18.76■□□□□ 0.59
Shh-201ENSMUST00000002708 IqcgQ80W32 419 aa18.76■□□□□ 0.59
Shh-201ENSMUST00000002708 Maats1Q8BRC6 783 aa18.76■□□□□ 0.59
Shh-201ENSMUST00000002708 Ttc14Q9CSP9 761 aa18.76■□□□□ 0.59
Shh-201ENSMUST00000002708 Zranb2Q9R020 330 aaKnown RBP18.76■□□□□ 0.59
Shh-201ENSMUST00000002708 Nup98Q6PFD9 1816 aaKnown RBP18.76■□□□□ 0.59
Shh-201ENSMUST00000002708 Myh4Q5SX39 1939 aa18.76■□□□□ 0.59
Shh-201ENSMUST00000002708 NesQ6P5H2 1864 aaKnown RBP18.76■□□□□ 0.59
Shh-201ENSMUST00000002708 CltaO08585 235 aa18.76■□□□□ 0.59
Shh-201ENSMUST00000002708 Kif2aP28740 705 aa18.76■□□□□ 0.59
Shh-201ENSMUST00000002708 Gnat2P50149 354 aa18.76■□□□□ 0.59
Shh-201ENSMUST00000002708 Q3TYL0 343 aa18.76■□□□□ 0.59
Shh-201ENSMUST00000002708 Snai1Q02085 264 aa18.75■□□□□ 0.59
Shh-201ENSMUST00000002708 Luc7l2Q7TNC4 392 aaKnown RBP18.75■□□□□ 0.59
Shh-201ENSMUST00000002708 VmacQ8BP01 174 aa18.75■□□□□ 0.59
Shh-201ENSMUST00000002708 Tcp11l1Q8BTG3 509 aa18.75■□□□□ 0.59
Shh-201ENSMUST00000002708 Ankk1Q8BZ25 745 aa18.75■□□□□ 0.59
Shh-201ENSMUST00000002708 Terb1Q8C0V1 768 aa18.75■□□□□ 0.59
Shh-201ENSMUST00000002708 Pik3ap1Q9EQ32 811 aa18.75■□□□□ 0.59
Shh-201ENSMUST00000002708 EmbP21995 330 aa18.75■□□□□ 0.59
Shh-201ENSMUST00000002708 Gtf2f1Q3THK3 508 aaKnown RBP18.75■□□□□ 0.59
Shh-201ENSMUST00000002708 C87499Q3UX49 493 aa18.75■□□□□ 0.59
Shh-201ENSMUST00000002708 Pcdhgc5Q91XW9 944 aa18.75■□□□□ 0.59
Shh-201ENSMUST00000002708 Cbx6Q9DBY5 414 aa18.75■□□□□ 0.59
Shh-201ENSMUST00000002708 Stox1B2RQL2 990 aa18.74■□□□□ 0.59
Shh-201ENSMUST00000002708 Myo1bP46735 1107 aa18.74■□□□□ 0.59
Shh-201ENSMUST00000002708 Q8BT18 775 aa18.74■□□□□ 0.59
Shh-201ENSMUST00000002708 Paf1Q8K2T8 535 aa18.74■□□□□ 0.59
Shh-201ENSMUST00000002708 Gtpbp4Q99ME9 634 aaKnown RBP18.74■□□□□ 0.59
Shh-201ENSMUST00000002708 Tfcp2Q9ERA0 502 aa18.74■□□□□ 0.59
Shh-201ENSMUST00000002708 Znf638Q61464 1960 aaKnown RBP18.74■□□□□ 0.59
Shh-201ENSMUST00000002708 Bnip3O55003 187 aa18.74■□□□□ 0.59
Shh-201ENSMUST00000002708 Dynll1P63168 89 aa18.74■□□□□ 0.59
Shh-201ENSMUST00000002708 Baiap2l1Q9DBJ3 514 aa18.74■□□□□ 0.59
Shh-201ENSMUST00000002708 Il7P10168 154 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Stat5bP42232 786 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Spata5Q3UMC0 893 aaKnown RBP18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Lamb3Q61087 1168 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 SowahdQ8BY98 327 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Pm20d1Q8C165 503 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Evc2Q8K1G2 1220 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Washc1Q8VDD8 475 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Tab2Q99K90 693 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 ParvgQ9ERD8 331 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Gabpb2P81069 414 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 HelbQ6NVF4 1074 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Hic2Q9JLZ6 619 aaKnown RBP18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Chaf1aQ9QWF0 911 aa18.73■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms