RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Ovol2Q8CIV7 274 aa7.41□□□□□ -1.22
Scn8a-213ENSMUST00000201549 Igkv3-10A0A0G2JGN0 119 aa7.41□□□□□ -1.22
Scn8a-213ENSMUST00000201549 BC048502Q80Y74 154 aa7.41□□□□□ -1.22
Scn8a-213ENSMUST00000201549 Adamts20P59511 1906 aa7.41□□□□□ -1.22
Scn8a-213ENSMUST00000201549 Ube2e1P52482 193 aa7.4□□□□□ -1.22
Scn8a-213ENSMUST00000201549 Lypd6Q8BPP5 171 aa7.4□□□□□ -1.22
Scn8a-213ENSMUST00000201549 Lypd8Q9D7S0 255 aa7.4□□□□□ -1.22
Scn8a-213ENSMUST00000201549 Ighv8-6A0A0A6YXA3 118 aa7.4□□□□□ -1.22
Scn8a-213ENSMUST00000201549 Trav14-1A0A0G2JF94 121 aa7.4□□□□□ -1.22
Scn8a-213ENSMUST00000201549 9530003J23RikQ8BM26 151 aa7.4□□□□□ -1.22
Scn8a-213ENSMUST00000201549 Card19Q9D1I2 183 aa7.4□□□□□ -1.22
Scn8a-213ENSMUST00000201549 Gvin1Q80SU7 2427 aa7.4□□□□□ -1.22
Scn8a-213ENSMUST00000201549 Trav9d-4A0A0G2JG37 103 aa7.4□□□□□ -1.22
Scn8a-213ENSMUST00000201549 Zfp648D3Z0W3 525 aa7.4□□□□□ -1.22
Scn8a-213ENSMUST00000201549 Gm5129F6YHA9 99 aa7.4□□□□□ -1.22
Scn8a-213ENSMUST00000201549 Rbmy1bQ60990 380 aa7.4□□□□□ -1.22
Scn8a-213ENSMUST00000201549 Spag11Q8K4N2 71 aa7.4□□□□□ -1.22
Scn8a-213ENSMUST00000201549 P01736 120 aa7.4□□□□□ -1.23
Scn8a-213ENSMUST00000201549 H2al1aQ5M8Q2 105 aa7.4□□□□□ -1.23
Scn8a-213ENSMUST00000201549 EpopQ7TNS8 369 aa7.4□□□□□ -1.23
Scn8a-213ENSMUST00000201549 H2al1eQ810S6 105 aa7.4□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Dopey2Q3UHQ6 2295 aa7.4□□□□□ -1.23
Scn8a-213ENSMUST00000201549 ColqO35348 457 aa7.39□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Higd1aQ9JLR9 95 aa7.39□□□□□ -1.23
Scn8a-213ENSMUST00000201549 AgrnA2ASQ1 1950 aa7.39□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Ang6Q5GAN0 147 aa7.39□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Defb29Q8BGW9 78 aa7.39□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Ighv3-4A0A0A6YXF1 117 aa7.39□□□□□ -1.23
Scn8a-213ENSMUST00000201549 BikO70337 150 aa7.39□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Gm10604Q3V0X7 143 aa7.39□□□□□ -1.23
Scn8a-213ENSMUST00000201549 9930022D16RikQ8BG27 128 aa7.39□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Eml6Q5SQM0 1958 aa7.39□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Ighv1-81A0A075B5Y4 117 aa7.39□□□□□ -1.23
Scn8a-213ENSMUST00000201549 NpwA0A1L1STR8 176 aa7.39□□□□□ -1.23
Scn8a-213ENSMUST00000201549 3110082J24RikF6Z6Z2 108 aa7.39□□□□□ -1.23
Scn8a-213ENSMUST00000201549 AmelxP63277 210 aa7.39□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Fhl4Q8CDC8 279 aa7.39□□□□□ -1.23
Scn8a-213ENSMUST00000201549 1700012A03RikQ9DAF1 130 aa7.39□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Tnfrsf13bQ9ET35 249 aa7.39□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Igkv6-15A0A140T8M5 115 aa7.38□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Igkv4-92A0A0B4J1I2 117 aa7.38□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Igkv3-5A0A140T8M6 119 aa7.38□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Cep350E9Q309 3095 aa7.38□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Igkv8-26A0A075B5N5 123 aa7.38□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Plac1Q9JI83 173 aa7.38□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Trav16d-dv11A0A075B617 117 aa7.38□□□□□ -1.23
Scn8a-213ENSMUST00000201549 P01739 132 aa7.38□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Tdgf1P51865 171 aa7.38□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Mrpl53Q9D1H8 118 aaKnown RBP7.38□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Tcrg-C1A0A075B5Z0 172 aa7.38□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Spata46Q4FZF2 204 aa7.38□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Olfr745Q7TRL9 328 aa7.38□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Rnf5O35445 180 aa7.37□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Rpl36aP83882 106 aaKnown RBP7.37□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Wfdc3Q14AE4 130 aa7.37□□□□□ -1.23
Scn8a-213ENSMUST00000201549 March3Q8BRX9 218 aa7.37□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Trav19A0A0B4J1K4 119 aa7.37□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Dnah12Q3V0Q1 3086 aa7.37□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Igkv3-3A0A140T8Q0 119 aa7.37□□□□□ -1.23
Scn8a-213ENSMUST00000201549 P01658 132 aa7.37□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Ypel3P61237 119 aa7.37□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Odf3l1Q810P2 275 aa7.37□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Slc25a48Q8BW66 306 aa7.37□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Lyg1Q9D7Q0 197 aa7.37□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Ighv1-69A0A0G2JFS5 117 aa7.37□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Foxf1Q61080 378 aa7.37□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Iba57Q8CAK1 358 aaKnown RBP7.37□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Ndufs7Q9DC70 224 aa7.37□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Wipf2Q6PEV3 440 aa7.36□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Amn1B8JKV0 258 aa7.36□□□□□ -1.23
Scn8a-213ENSMUST00000201549 PdpnQ62011 172 aa7.36□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Ighv14-1A0A075B5R4 117 aa7.36□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Slc25a29Q8BL03 306 aa7.36□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Sptan1P16546 2472 aaKnown RBP7.36□□□□□ -1.23
Scn8a-213ENSMUST00000201549 KprpB2RUR4 657 aa7.36□□□□□ -1.23
Scn8a-213ENSMUST00000201549 A930003A15RikQ3U552 87 aa7.36□□□□□ -1.23
Scn8a-213ENSMUST00000201549 F930015N05RikQ8C3A3 210 aa7.35□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Gm4763Q8CFJ5 196 aa7.35□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Trav14-3A0A075B607 120 aa7.35□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Gm10803Q3TZS6 135 aa7.35□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Gpx1P11352 201 aa7.35□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Gm20730A0A075B5J6 119 aa7.35□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Ighv1-31A0A0A6YWK5 117 aa7.35□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Gm20708H3BKF4 155 aa7.35□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Rmi2Q3UPE3 149 aa7.35□□□□□ -1.23
Scn8a-213ENSMUST00000201549 F5O88783 2183 aa7.35□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Socs3O35718 225 aa7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 NpsP0C0P8 89 aa7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Ifi27l2aQ8R412 90 aa7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Trav6-4A0A075B6B4 115 aa7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Igkv1-88A0A140T8N1 120 aa7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 P01793 123 aa7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Col8a2P25318 699 aa7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 OtorQ9JIE3 128 aa7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Prpf8Q99PV0 2335 aaKnown RBP7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Ighv1-62-3P01754 117 aa7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Prop1P97458 223 aa7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 PemtQ61907 199 aa7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Smim10l1A0A087WNQ7 89 aa7.34□□□□□ -1.23
Scn8a-213ENSMUST00000201549 Defb47Q30KN1 79 aa7.34□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 58.9 ms